Protein : Qrob_P0448870.2 Q. robur
Protein Identifier  ? Qrob_P0448870.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) PF00234 - Protease inhibitor/seed storage/LTP family Gene Prediction Quality  validated
Protein length 

Sequence

Length: 118  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0008289 lipid binding Interacting selectively and non-covalently with a lipid.
GO:0006869 lipid transport The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

31 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10013119mg 1 117 + 117 Gaps:2 100.00 115 53.91 1e-36 hypothetical protein
blastp_kegg lcl|cit:102624419 1 117 + 117 Gaps:2 100.00 115 53.91 1e-36 non-specific lipid-transfer protein-like
blastp_kegg lcl|fve:101306061 3 117 + 115 Gaps:3 95.73 117 53.57 1e-34 non-specific lipid-transfer protein 1-like
blastp_kegg lcl|cic:CICLE_v10012953mg 1 117 + 117 Gaps:2 100.00 115 53.04 1e-33 hypothetical protein
blastp_kegg lcl|cit:102624700 1 117 + 117 Gaps:2 100.00 115 53.04 1e-33 non-specific lipid-transfer protein-like
blastp_kegg lcl|pmum:103343068 2 117 + 116 Gaps:3 96.58 117 53.10 3e-33 non-specific lipid-transfer protein 1
blastp_kegg lcl|cic:CICLE_v10013139mg 3 117 + 115 Gaps:1 99.15 117 49.14 6e-33 hypothetical protein
blastp_kegg lcl|cit:102624990 3 117 + 115 Gaps:1 99.15 117 49.14 6e-33 non-specific lipid-transfer protein-like
blastp_kegg lcl|mus:103971897 9 117 + 109 Gaps:3 92.31 117 52.78 1e-32 non-specific lipid-transfer protein-like
blastp_kegg lcl|fve:101301595 2 117 + 116 Gaps:3 97.41 116 52.21 2e-32 non-specific lipid-transfer protein-like isoform 1
blastp_pdb 1t12_A 25 117 + 93 Gaps:3 98.90 91 57.78 5e-29 mol:protein length:91 NONSPECIFIC LIPID-TRANSFER PROTEIN 1
blastp_pdb 1mzm_A 25 116 + 92 Gaps:1 97.85 93 52.75 7e-28 mol:protein length:93 MAIZE NONSPECIFIC LIPID TRANSFER PROTEIN
blastp_pdb 1mzl_A 25 116 + 92 Gaps:1 97.85 93 52.75 7e-28 mol:protein length:93 MAIZE NONSPECIFIC LIPID TRANSFER PROTEIN
blastp_pdb 1fk7_A 25 116 + 92 Gaps:1 97.85 93 52.75 7e-28 mol:protein length:93 NON-SPECIFIC LIPID TRANSFER PROTEIN
blastp_pdb 1fk6_A 25 116 + 92 Gaps:1 97.85 93 52.75 7e-28 mol:protein length:93 NON-SPECIFIC LIPID TRANSFER PROTEIN
blastp_pdb 1fk5_A 25 116 + 92 Gaps:1 97.85 93 52.75 7e-28 mol:protein length:93 NONSPECIFIC LIPID-TRANSFER PROTEIN
blastp_pdb 1fk4_A 25 116 + 92 Gaps:1 97.85 93 52.75 7e-28 mol:protein length:93 NONSPECIFIC LIPID-TRANSFER PROTEIN
blastp_pdb 1fk3_A 25 116 + 92 Gaps:1 97.85 93 52.75 7e-28 mol:protein length:93 NONSPECIFIC LIPID-TRANSFER PROTEIN
blastp_pdb 1fk2_A 25 116 + 92 Gaps:1 97.85 93 52.75 7e-28 mol:protein length:93 NONSPECIFIC LIPID-TRANSFER PROTEIN
blastp_pdb 1fk1_A 25 116 + 92 Gaps:1 97.85 93 52.75 7e-28 mol:protein length:93 NON-SPECIFIC LIPID TRANSFER PROTEIN
blastp_uniprot_sprot sp|Q43129|NLTP2_GOSHI 3 117 + 115 none 95.83 120 50.43 1e-37 Non-specific lipid-transfer protein OS Gossypium hirsutum PE 2 SV 1
blastp_uniprot_sprot sp|Q42762|NLTP1_GOSHI 3 117 + 115 none 99.14 116 50.43 1e-37 Non-specific lipid-transfer protein OS Gossypium hirsutum PE 3 SV 1
blastp_uniprot_sprot sp|Q43017|NLTP1_PRUDU 2 117 + 116 Gaps:3 96.58 117 53.98 7e-35 Non-specific lipid-transfer protein 1 OS Prunus dulcis PE 3 SV 1
blastp_uniprot_sprot sp|Q9M5X6|NLTP_PYRCO 2 117 + 116 Gaps:5 96.52 115 54.05 1e-33 Non-specific lipid-transfer protein OS Pyrus communis PE 1 SV 1
blastp_uniprot_sprot sp|Q9M5X8|NLTP_PRUAV 2 117 + 116 Gaps:3 96.58 117 51.33 7e-33 Non-specific lipid-transfer protein OS Prunus avium PE 1 SV 1
blastp_uniprot_sprot sp|Q42952|NLTP1_TOBAC 5 117 + 113 Gaps:4 95.61 114 54.13 9e-33 Non-specific lipid-transfer protein 1 OS Nicotiana tabacum GN LTP1 PE 1 SV 1
blastp_uniprot_sprot sp|A0AT28|NLTP1_LENCU 1 117 + 117 Gaps:4 99.15 118 52.14 7e-32 Non-specific lipid-transfer protein 1 OS Lens culinaris PE 3 SV 1
blastp_uniprot_sprot sp|Q39950|NLTP_HELAN 8 117 + 110 Gaps:3 92.24 116 52.34 1e-31 Non-specific lipid-transfer protein OS Helianthus annuus PE 3 SV 1
blastp_uniprot_sprot sp|O24418|NLTP6_GOSHI 3 117 + 115 none 95.83 120 43.48 2e-31 Non-specific lipid-transfer protein 6 OS Gossypium hirsutum GN LTP6 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M5X7|NLTP_MALDO 2 117 + 116 Gaps:5 96.52 115 52.25 2e-31 Non-specific lipid-transfer protein OS Malus domestica GN MALD3 PE 1 SV 1

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 25 116 92 SSF47699 none none IPR016140
Gene3D 25 117 93 G3DSA:1.10.110.10 none none none
ProSitePatterns 95 116 22 PS00597 none Plant lipid transfer proteins signature. IPR000528
Phobius 7 18 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Pfam 28 113 86 PF00234 none Protease inhibitor/seed storage/LTP family IPR016140
Phobius 19 23 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PRINTS 48 62 15 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 26 42 17 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 86 103 18 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 69 84 16 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 104 115 12 PR00382 none Plant phospholipid transfer protein signature IPR000528
Phobius 24 117 94 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
SMART 27 113 87 SM00499 none Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family IPR016140
Phobius 1 6 6 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none

4 Localization

Analysis Start End Length
SignalP_EUK 1 23 22
SignalP_GRAM_NEGATIVE 1 23 22
SignalP_GRAM_POSITIVE 1 23 22
TMHMM 7 26 19

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

0 Targeting