Protein : Qrob_P0445240.2 Q. robur
Protein Identifier  ? Qrob_P0445240.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K14505 - cyclin D3, plant Gene Prediction Quality  validated
Protein length 

Sequence

Length: 369  
Kegg Orthology  K14505
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0051726 regulation of cell cycle Any process that modulates the rate or extent of progression through the cell cycle.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa007350mg 1 367 + 367 Gaps:7 99.73 371 75.14 0.0 hypothetical protein
blastp_kegg lcl|pmum:103337458 1 367 + 367 Gaps:7 99.73 371 74.59 0.0 cyclin-D3-2
blastp_kegg lcl|vvi:100267897 1 368 + 368 Gaps:6 100.00 372 70.70 0.0 cyclin-D3-2-like
blastp_kegg lcl|pxb:103961596 1 368 + 368 Gaps:9 100.00 369 72.09 1e-179 cyclin-D3-2-like
blastp_kegg lcl|mdm:103425108 1 368 + 368 Gaps:9 100.00 369 71.00 7e-177 cyclin-D3-2-like
blastp_kegg lcl|pxb:103957180 1 368 + 368 Gaps:14 100.00 364 70.88 4e-176 cyclin-D3-2
blastp_kegg lcl|mdm:103453716 1 368 + 368 Gaps:18 100.00 364 70.05 2e-172 cyclin-D3-2-like
blastp_kegg lcl|pop:POPTR_0005s18550g 3 367 + 365 Gaps:12 98.92 371 70.30 3e-169 POPTRDRAFT_558898 cyclin D3-2 family protein
blastp_kegg lcl|pop:POPTR_0007s10570g 3 368 + 366 Gaps:8 98.38 370 71.15 3e-167 POPTRDRAFT_819938 cyclin D3-2 family protein
blastp_kegg lcl|fve:101308213 1 368 + 368 Gaps:12 100.00 376 64.63 7e-163 cyclin-D3-2-like
blastp_pdb 3qhw_D 92 247 + 156 Gaps:24 57.47 261 35.33 1e-07 mol:protein length:261 Cyclin-A2
blastp_pdb 3qhw_B 92 247 + 156 Gaps:24 57.47 261 35.33 1e-07 mol:protein length:261 Cyclin-A2
blastp_pdb 3qhr_D 92 247 + 156 Gaps:24 57.47 261 35.33 1e-07 mol:protein length:261 Cyclin-A2
blastp_pdb 3qhr_B 92 247 + 156 Gaps:24 57.47 261 35.33 1e-07 mol:protein length:261 Cyclin-A2
blastp_pdb 1e9h_D 92 200 + 109 Gaps:12 40.23 261 39.05 5e-07 mol:protein length:261 CYCLIN A3
blastp_pdb 1e9h_B 92 200 + 109 Gaps:12 40.23 261 39.05 5e-07 mol:protein length:261 CYCLIN A3
blastp_pdb 3f5x_D 92 200 + 109 Gaps:12 41.02 256 39.05 5e-07 mol:protein length:256 Cyclin-A2
blastp_pdb 3f5x_B 92 200 + 109 Gaps:12 41.02 256 39.05 5e-07 mol:protein length:256 Cyclin-A2
blastp_pdb 3eoc_D 92 245 + 154 Gaps:24 56.92 260 35.14 5e-07 mol:protein length:260 Cyclin-A2
blastp_pdb 3eoc_B 92 245 + 154 Gaps:24 56.92 260 35.14 5e-07 mol:protein length:260 Cyclin-A2
blastp_uniprot_sprot sp|Q9FGQ7|CCD32_ARATH 1 368 + 368 Gaps:27 100.00 367 57.22 6e-131 Cyclin-D3-2 OS Arabidopsis thaliana GN CYCD3-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SN11|CCD33_ARATH 1 368 + 368 Gaps:23 100.00 361 55.12 6e-113 Cyclin-D3-3 OS Arabidopsis thaliana GN CYCD3-3 PE 2 SV 1
blastp_uniprot_sprot sp|P42753|CCD31_ARATH 4 302 + 299 Gaps:8 78.46 376 57.63 1e-109 Cyclin-D3-1 OS Arabidopsis thaliana GN CYCD3-1 PE 1 SV 3
blastp_uniprot_sprot sp|Q10K98|CCD23_ORYSJ 79 288 + 210 Gaps:5 52.10 405 42.18 4e-44 Putative cyclin-D2-3 OS Oryza sativa subsp. japonica GN CYCD2-3 PE 3 SV 1
blastp_uniprot_sprot sp|Q6YXH8|CCD41_ORYSJ 84 336 + 253 Gaps:16 68.26 356 43.21 1e-43 Cyclin-D4-1 OS Oryza sativa subsp. japonica GN CYCD4-1 PE 2 SV 2
blastp_uniprot_sprot sp|P42752|CCD21_ARATH 82 317 + 236 Gaps:7 65.65 361 39.24 3e-42 Cyclin-D2-1 OS Arabidopsis thaliana GN CYCD2-1 PE 1 SV 3
blastp_uniprot_sprot sp|Q8LHA8|CCD22_ORYSJ 92 353 + 262 Gaps:11 72.19 356 38.13 1e-41 Cyclin-D2-2 OS Oryza sativa subsp. japonica GN CYCD2-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q69QB8|CCD31_ORYSJ 62 358 + 297 Gaps:25 83.63 342 38.11 8e-39 Cyclin-D3-1 OS Oryza sativa subsp. japonica GN CYCD3-1 PE 2 SV 2
blastp_uniprot_sprot sp|P42751|CCD11_ARATH 91 284 + 194 Gaps:6 57.82 339 43.88 4e-38 Cyclin-D1-1 OS Arabidopsis thaliana GN CYCD1-1 PE 1 SV 3
blastp_uniprot_sprot sp|Q0J233|CCD21_ORYSJ 91 287 + 197 Gaps:26 60.06 308 45.95 1e-37 Cyclin-D2-1 OS Oryza sativa subsp. japonica GN CYCD2-1 PE 3 SV 2

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 194 303 110 PF02984 none Cyclin, C-terminal domain IPR004367
PANTHER 21 357 337 PTHR10177:SF166 none none IPR031093
SMART 97 185 89 SM00385 none domain present in cyclins, TFIIB and Retinoblastoma IPR013763
SUPERFAMILY 59 192 134 SSF47954 none none IPR013763
PANTHER 21 357 337 PTHR10177 none none none
Gene3D 186 302 117 G3DSA:1.10.472.10 none none IPR013763
Pfam 91 192 102 PF00134 none Cyclin, N-terminal domain IPR006671
ProSitePatterns 92 123 32 PS00292 none Cyclins signature. IPR006671
Gene3D 91 185 95 G3DSA:1.10.472.10 none none IPR013763

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9

0 Targeting