Protein : Qrob_P0442690.2 Q. robur
Protein Identifier  ? Qrob_P0442690.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K12736 - peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8] Code Enzyme  EC:5.2.1.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 621  
Kegg Orthology  K12736
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0006457 protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO:0000413 protein peptidyl-prolyl isomerization The modification of a protein by cis-trans isomerization of a proline residue.
GO:0003755 peptidyl-prolyl cis-trans isomerase activity Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_041474 1 620 + 620 none 90.25 687 90.48 0.0 Cyclophilin71 isoform 2
blastp_kegg lcl|cmo:103500240 1 619 + 619 Gaps:4 99.84 624 91.01 0.0 peptidylprolyl isomerase domain and WD repeat-containing protein 1
blastp_kegg lcl|csv:101231249 1 619 + 619 Gaps:4 99.84 624 90.85 0.0 PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1
blastp_kegg lcl|csv:101204119 1 619 + 619 Gaps:4 99.84 624 90.85 0.0 PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1
blastp_kegg lcl|rcu:RCOM_0792840 1 620 + 620 Gaps:3 100.00 623 90.21 0.0 WD-repeat protein putative (EC:5.2.1.8)
blastp_kegg lcl|gmx:100792207 2 620 + 619 Gaps:5 99.68 616 91.37 0.0 peptidylprolyl isomerase domain and WD repeat-containing protein 1-like
blastp_kegg lcl|pvu:PHAVU_005G126100g 1 620 + 620 Gaps:5 100.00 615 90.41 0.0 hypothetical protein
blastp_kegg lcl|pmum:103326974 3 620 + 618 none 95.67 646 89.81 0.0 peptidylprolyl isomerase domain and WD repeat-containing protein 1
blastp_kegg lcl|gmx:100801887 2 620 + 619 Gaps:5 99.68 616 90.72 0.0 peptidylprolyl isomerase domain and WD repeat-containing protein 1-like
blastp_kegg lcl|pop:POPTR_0009s14870g 2 620 + 619 Gaps:1 99.68 620 89.48 0.0 POPTRDRAFT_721509 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein
blastp_pdb 2a2n_C 463 617 + 155 Gaps:1 88.64 176 70.51 9e-77 mol:protein length:176 peptidylprolyl isomerase domain and WD repeat
blastp_pdb 2a2n_B 463 617 + 155 Gaps:1 88.64 176 70.51 9e-77 mol:protein length:176 peptidylprolyl isomerase domain and WD repeat
blastp_pdb 2a2n_A 463 617 + 155 Gaps:1 88.64 176 70.51 9e-77 mol:protein length:176 peptidylprolyl isomerase domain and WD repeat
blastp_pdb 2fu0_A 464 617 + 154 none 96.25 160 66.88 2e-71 mol:protein length:160 cyclophilin putative
blastp_pdb 2ok3_A 467 617 + 151 Gaps:1 94.41 161 53.29 1e-47 mol:protein length:161 Peptidyl-prolyl cis-trans isomerase-like 3
blastp_pdb 1xyh_A 467 617 + 151 Gaps:1 94.41 161 53.29 1e-47 mol:protein length:161 cyclophilin-like protein PPIL3b
blastp_pdb 2oju_B 467 617 + 151 Gaps:1 91.02 167 53.29 1e-47 mol:protein length:167 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 3
blastp_pdb 2oju_A 467 617 + 151 Gaps:1 91.02 167 53.29 1e-47 mol:protein length:167 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 3
blastp_pdb 2x7k_A 464 613 + 150 none 90.36 166 51.33 3e-47 mol:protein length:166 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 1
blastp_pdb 1xwn_A 464 613 + 150 none 86.21 174 51.33 3e-47 mol:protein length:174 Peptidyl-prolyl cis-trans isomerase like 1
blastp_uniprot_sprot sp|Q96BP3|PPWD1_HUMAN 8 617 + 610 Gaps:23 94.27 646 53.69 0.0 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS Homo sapiens GN PPWD1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8CEC6|PPWD1_MOUSE 22 617 + 596 Gaps:23 92.11 646 54.45 0.0 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS Mus musculus GN Ppwd1 PE 2 SV 2
blastp_uniprot_sprot sp|Q29RZ2|PPWD1_BOVIN 22 617 + 596 Gaps:23 92.39 644 54.29 0.0 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS Bos taurus GN PPWD1 PE 2 SV 1
blastp_uniprot_sprot sp|Q5NVL7|PPWD1_PONAB 8 617 + 610 Gaps:23 94.27 646 53.69 0.0 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS Pongo abelii GN PPWD1 PE 2 SV 1
blastp_uniprot_sprot sp|P0C1J0|CYP15_RHIO9 20 606 + 587 Gaps:17 93.33 630 52.38 0.0 Peptidyl-prolyl cis-trans isomerase cyp15 OS Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN cyp15 PE 3 SV 1
blastp_uniprot_sprot sp|O74942|CYP9_SCHPO 10 617 + 608 Gaps:30 99.02 610 40.89 2e-144 Peptidyl-prolyl cis-trans isomerase 9 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN cyp9 PE 1 SV 1
blastp_uniprot_sprot sp|Q4WCR3|PPIL1_ASPFU 463 617 + 155 none 96.27 161 54.84 1e-52 Peptidyl-prolyl cis-trans isomerase-like 1 OS Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN cyp1 PE 3 SV 1
blastp_uniprot_sprot sp|Q7SF72|PPIL1_NEUCR 463 617 + 155 none 95.09 163 54.84 3e-52 Peptidyl-prolyl cis-trans isomerase-like 1 OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN ppi-1 PE 3 SV 2
blastp_uniprot_sprot sp|Q4I1Y1|PPIL1_GIBZE 463 617 + 155 none 95.68 162 54.19 4e-52 Peptidyl-prolyl cis-trans isomerase-like 1 OS Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN CYP1 PE 3 SV 1
blastp_uniprot_sprot sp|Q5ASQ0|PPIL1_EMENI 463 617 + 155 none 95.68 162 53.55 4e-51 Peptidyl-prolyl cis-trans isomerase-like 1 OS Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN cyp1 PE 3 SV 1

22 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 465 617 153 G3DSA:2.40.100.10 none none IPR029000
PRINTS 564 576 13 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PRINTS 549 564 16 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PRINTS 506 518 13 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PRINTS 577 592 16 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PRINTS 480 495 16 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
ProSitePatterns 501 518 18 PS00170 none Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. IPR020892
SMART 91 130 40 SM00320 none WD40 repeats IPR001680
SMART 181 220 40 SM00320 none WD40 repeats IPR001680
SMART 237 276 40 SM00320 none WD40 repeats IPR001680
SMART 49 86 38 SM00320 none WD40 repeats IPR001680
ProSiteProfiles 55 86 32 PS50082 none Trp-Asp (WD) repeats profile. IPR001680
ProSiteProfiles 463 617 155 PS50072 none Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. IPR002130
Pfam 468 616 149 PF00160 none Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IPR002130
ProSiteProfiles 55 139 85 PS50294 none Trp-Asp (WD) repeats circular profile. IPR017986
Gene3D 58 429 372 G3DSA:2.130.10.10 none none IPR015943
PANTHER 351 448 98 PTHR11071 none none IPR024936
PANTHER 467 617 151 PTHR11071 none none IPR024936
SUPERFAMILY 462 617 156 SSF50891 none none IPR029000
SUPERFAMILY 56 290 235 SSF50978 none none IPR017986
Pfam 56 86 31 PF00400 none WD domain, G-beta repeat IPR001680
Pfam 97 130 34 PF00400 none WD domain, G-beta repeat IPR001680

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting