Protein : Qrob_P0441850.2 Q. robur
Protein Identifier  ? Qrob_P0441850.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) K02109 - F-type H+-transporting ATPase subunit b [EC:3.6.3.14] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 222  
Kegg Orthology  K02109
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0015078 hydrogen ion transmembrane transporter activity Enables the transfer of hydrogen ions from one side of a membrane to the other.
GO:0015986 ATP synthesis coupled proton transport The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0006s27170g 1 219 + 219 Gaps:3 99.09 220 77.52 1e-97 POPTRDRAFT_417685 hypothetical protein
blastp_kegg lcl|pop:POPTR_0018s01830g 1 219 + 219 Gaps:3 99.09 220 77.06 2e-97 POPTRDRAFT_261089 hypothetical protein
blastp_kegg lcl|tcc:TCM_036983 1 217 + 217 Gaps:3 43.86 497 72.94 5e-96 ATP synthase subunit b' isoform 1
blastp_kegg lcl|cam:101500760 1 220 + 220 Gaps:14 99.53 213 74.53 9e-90 ATP synthase subunit b' chloroplastic-like
blastp_kegg lcl|sot:102584964 1 220 + 220 Gaps:3 99.10 223 71.04 4e-88 ATP synthase subunit b' chloroplastic-like
blastp_kegg lcl|sly:101262821 1 220 + 220 Gaps:3 99.10 223 71.04 4e-88 ATP synthase subunit b' chloroplastic-like
blastp_kegg lcl|sot:102584644 1 219 + 219 Gaps:3 98.65 223 70.91 2e-87 ATP synthase subunit b' chloroplastic-like
blastp_kegg lcl|cmo:103488320 1 219 + 219 Gaps:10 99.54 216 72.56 1e-85 ATP synthase subunit b' chloroplastic
blastp_kegg lcl|sly:101263124 1 219 + 219 Gaps:3 98.65 223 70.45 2e-85 ATP synthase subunit b' chloroplastic-like
blastp_kegg lcl|gmx:100817028 1 220 + 220 Gaps:8 99.53 215 73.36 2e-85 ATP synthase subunit b' chloroplastic-like
blastp_uniprot_sprot sp|P31853|ATPX_SPIOL 35 220 + 186 Gaps:12 81.98 222 72.53 9e-78 ATP synthase subunit b' chloroplastic OS Spinacia oleracea GN ATPG PE 1 SV 2
blastp_uniprot_sprot sp|A8J785|ATPX_CHLRE 57 219 + 163 Gaps:4 76.08 209 42.14 2e-37 ATP synthase subunit b' chloroplastic OS Chlamydomonas reinhardtii GN ATPG PE 1 SV 1
blastp_uniprot_sprot sp|P48085|ATPX_CYAPA 73 218 + 146 Gaps:4 91.46 164 35.33 2e-21 ATP synthase B' chain cyanelle OS Cyanophora paradoxa GN atpG PE 3 SV 1
blastp_uniprot_sprot sp|A6MVW7|ATPX_RHDSA 79 219 + 141 none 90.97 155 34.75 2e-20 ATP synthase subunit b' chloroplastic OS Rhodomonas salina GN atpG PE 3 SV 1
blastp_uniprot_sprot sp|B0BZK9|ATPX_ACAM1 82 220 + 139 none 97.89 142 31.65 1e-18 ATP synthase subunit b' OS Acaryochloris marina (strain MBIC 11017) GN atpG PE 3 SV 1
blastp_uniprot_sprot sp|Q8DLP6|ATPX_THEEB 82 218 + 137 none 99.28 138 32.85 3e-18 ATP synthase subunit b' OS Thermosynechococcus elongatus (strain BP-1) GN atpG PE 3 SV 1
blastp_uniprot_sprot sp|Q1XDP2|ATPX_PYRYE 71 220 + 150 none 96.15 156 35.33 1e-17 ATP synthase subunit b' chloroplastic OS Pyropia yezoensis GN atpG PE 3 SV 1
blastp_uniprot_sprot sp|O78478|ATPX_GUITH 79 220 + 142 none 87.12 163 32.39 2e-17 ATP synthase subunit b' chloroplastic OS Guillardia theta GN atpG PE 3 SV 1
blastp_uniprot_sprot sp|Q40608|ATPX_OCHNE 79 218 + 140 none 85.89 163 34.29 3e-17 ATP synthase subunit b' chloroplastic OS Ochrosphaera neapolitana GN atpG PE 3 SV 1
blastp_uniprot_sprot sp|B2J055|ATPX_NOSP7 82 220 + 139 Gaps:9 97.90 143 34.29 5e-17 ATP synthase subunit b' OS Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN atpG PE 3 SV 1
rpsblast_cdd gnl|CDD|177041 71 219 + 149 Gaps:8 95.51 156 36.91 3e-20 CHL00118 atpG ATP synthase CF0 B' subunit Validated.
rpsblast_cdd gnl|CDD|109486 88 218 + 131 none 99.24 132 34.35 5e-20 pfam00430 ATP-synt_B ATP synthase B/B' CF(0). Part of the CF(0) (base unit) of the ATP synthase. The base unit is thought to translocate protons through membrane (inner membrane in mitochondria thylakoid membrane in plants cytoplasmic membrane in bacteria). The B subunits are thought to interact with the stalk of the CF(1) subunits. This domain should not be confused with the ab CF(1) proteins (in the head of the ATP synthase) which are found in pfam00006.
rpsblast_cdd gnl|CDD|168917 82 218 + 137 none 97.86 140 32.85 9e-19 PRK07353 PRK07353 F0F1 ATP synthase subunit B' Validated.
rpsblast_cdd gnl|CDD|181442 96 217 + 122 none 86.52 141 31.15 5e-12 PRK08476 PRK08476 F0F1 ATP synthase subunit B' Validated.
rpsblast_cdd gnl|CDD|31055 93 218 + 126 none 78.26 161 27.78 4e-09 COG0711 AtpF F0F1-type ATP synthase subunit b [Energy production and conversion].
rpsblast_cdd gnl|CDD|184060 88 218 + 131 none 75.72 173 25.19 5e-09 PRK13453 PRK13453 F0F1 ATP synthase subunit B Provisional.
rpsblast_cdd gnl|CDD|180240 84 218 + 135 none 86.54 156 25.19 9e-08 PRK05759 PRK05759 F0F1 ATP synthase subunit B Validated.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 46 46 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 70 88 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Coils 122 213 92 Coil none none none
Phobius 89 108 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 47 69 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 88 218 131 PF00430 none ATP synthase B/B' CF(0) IPR002146
Phobius 109 221 113 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 20 19

20 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting