Protein : Qrob_P0440970.2 Q. robur
Protein Identifier  ? Qrob_P0440970.2 Organism . Name  Quercus robur
Score  23.1 Score Type  egn
Protein Description  (M=1) PTHR11071//PTHR11071:SF225 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // SUBFAMILY NOT NAMED Code Enzyme  EC:5.2.1.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 260  
Kegg Orthology  K03768
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006457 protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO:0000413 protein peptidyl-prolyl isomerization The modification of a protein by cis-trans isomerization of a proline residue.
GO:0003755 peptidyl-prolyl cis-trans isomerase activity Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102610362 10 259 + 250 Gaps:3 93.26 267 75.90 5e-131 peptidyl-prolyl cis-trans isomerase CYP20-3 chloroplastic-like
blastp_kegg lcl|tcc:TCM_004971 13 257 + 245 Gaps:6 92.64 258 76.15 1e-129 Peptidyl-prolyl cis-trans isomerase
blastp_kegg lcl|cic:CICLE_v10021681mg 30 259 + 230 Gaps:3 96.62 237 79.91 1e-128 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1342590 10 257 + 248 Gaps:8 92.72 261 74.79 5e-125 peptidyl-prolyl cis-trans isomerase putative (EC:5.2.1.8)
blastp_kegg lcl|pop:POPTR_0002s18610g 10 257 + 248 Gaps:3 92.86 266 72.87 1e-124 POPTRDRAFT_816669 cyclophilin family protein
blastp_kegg lcl|gmx:100785805 1 257 + 257 Gaps:11 95.38 260 70.97 5e-119 peptidyl-prolyl cis-trans isomerase chloroplastic-like
blastp_kegg lcl|vvi:100250386 49 257 + 209 Gaps:1 83.00 253 80.95 6e-119 peptidyl-prolyl cis-trans isomerase CYP20-3 chloroplastic-like
blastp_kegg lcl|pvu:PHAVU_001G219400g 2 257 + 256 Gaps:12 94.98 259 68.29 1e-113 hypothetical protein
blastp_kegg lcl|mtr:MTR_7g110980 48 257 + 210 Gaps:2 82.81 256 75.47 1e-111 Peptidyl-prolyl cis-trans isomerase
blastp_kegg lcl|pper:PRUPE_ppa010357mg 32 255 + 224 Gaps:20 88.10 252 76.13 5e-111 hypothetical protein
blastp_pdb 1cyn_A 91 257 + 167 none 93.82 178 64.67 2e-74 mol:protein length:178 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE B
blastp_pdb 3ici_B 91 257 + 167 none 88.83 188 64.67 2e-74 mol:protein length:188 Peptidyl-prolyl cis-trans isomerase B
blastp_pdb 3ici_A 91 257 + 167 none 88.83 188 64.67 2e-74 mol:protein length:188 Peptidyl-prolyl cis-trans isomerase B
blastp_pdb 3ich_A 91 257 + 167 none 88.83 188 64.67 2e-74 mol:protein length:188 Peptidyl-prolyl cis-trans isomerase B
blastp_pdb 2esl_F 92 257 + 166 none 87.37 190 67.47 3e-73 mol:protein length:190 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C
blastp_pdb 2esl_E 92 257 + 166 none 87.37 190 67.47 3e-73 mol:protein length:190 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C
blastp_pdb 2esl_D 92 257 + 166 none 87.37 190 67.47 3e-73 mol:protein length:190 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C
blastp_pdb 2esl_C 92 257 + 166 none 87.37 190 67.47 3e-73 mol:protein length:190 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C
blastp_pdb 2esl_B 92 257 + 166 none 87.37 190 67.47 3e-73 mol:protein length:190 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C
blastp_pdb 2esl_A 92 257 + 166 none 87.37 190 67.47 3e-73 mol:protein length:190 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C
blastp_uniprot_sprot sp|Q41651|CYPB_VICFA 51 257 + 207 Gaps:3 84.68 248 70.95 2e-102 Peptidyl-prolyl cis-trans isomerase chloroplastic OS Vicia faba PE 1 SV 1
blastp_uniprot_sprot sp|P34791|CP20C_ARATH 30 259 + 230 Gaps:8 90.77 260 65.25 1e-101 Peptidyl-prolyl cis-trans isomerase CYP20-3 chloroplastic OS Arabidopsis thaliana GN CYP20-3 PE 1 SV 1
blastp_uniprot_sprot sp|P0CP78|PPIB_CRYNJ 92 257 + 166 Gaps:6 74.46 231 70.35 2e-82 Peptidyl-prolyl cis-trans isomerase B OS Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN CPR2 PE 3 SV 1
blastp_uniprot_sprot sp|P0CP79|PPIB_CRYNB 92 257 + 166 Gaps:6 74.46 231 70.35 2e-82 Peptidyl-prolyl cis-trans isomerase B OS Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN CPR2 PE 3 SV 1
blastp_uniprot_sprot sp|Q9ASS6|CP20B_ARATH 79 257 + 179 Gaps:7 71.81 259 62.37 7e-82 Peptidyl-prolyl cis-trans isomerase CYP20-2 chloroplastic OS Arabidopsis thaliana GN CYP20-2 PE 1 SV 1
blastp_uniprot_sprot sp|Q01490|PPIB_ORPSP 71 257 + 187 none 92.12 203 61.50 8e-80 Peptidyl-prolyl cis-trans isomerase B OS Orpinomyces sp. (strain PC-2) GN CYPB PE 1 SV 1
blastp_uniprot_sprot sp|P24367|PPIB_CHICK 81 257 + 177 none 85.51 207 63.28 5e-76 Peptidyl-prolyl cis-trans isomerase B OS Gallus gallus GN PPIB PE 2 SV 1
blastp_uniprot_sprot sp|P24368|PPIB_RAT 81 257 + 177 none 81.94 216 62.71 6e-76 Peptidyl-prolyl cis-trans isomerase B OS Rattus norvegicus GN Ppib PE 1 SV 3
blastp_uniprot_sprot sp|P24369|PPIB_MOUSE 81 257 + 177 none 81.94 216 62.71 2e-75 Peptidyl-prolyl cis-trans isomerase B OS Mus musculus GN Ppib PE 2 SV 2
blastp_uniprot_sprot sp|P80311|PPIB_BOVIN 81 257 + 177 none 81.94 216 63.28 2e-75 Peptidyl-prolyl cis-trans isomerase B OS Bos taurus GN PPIB PE 1 SV 4

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 86 255 170 SSF50891 none none IPR029000
PRINTS 143 155 13 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PRINTS 114 129 16 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PRINTS 214 229 16 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PRINTS 201 213 13 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PRINTS 186 201 16 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PANTHER 81 257 177 PTHR11071:SF225 none none none
Gene3D 89 255 167 G3DSA:2.40.100.10 none none IPR029000
PANTHER 81 257 177 PTHR11071 none none IPR024936
ProSitePatterns 138 155 18 PS00170 none Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. IPR020892
ProSiteProfiles 97 254 158 PS50072 none Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. IPR002130
Pfam 98 253 156 PF00160 none Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IPR002130

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4

0 Targeting