Protein : Qrob_P0439810.2 Q. robur
Protein Identifier  ? Qrob_P0439810.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K13336 - peroxin-3 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 212  
Kegg Orthology  K13336
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005779 integral component of peroxisomal membrane The component of the peroxisomal membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0007031 peroxisome organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a peroxisome. A peroxisome is a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules.

14 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102608864 10 211 + 202 none 55.04 367 63.37 2e-86 peroxisome biogenesis protein 3-2-like
blastp_kegg lcl|tcc:TCM_012593 10 211 + 202 Gaps:1 54.57 372 64.53 3e-83 Peroxin 3 isoform 1
blastp_kegg lcl|pper:PRUPE_ppa009207mg 10 211 + 202 Gaps:7 64.57 302 64.62 4e-83 hypothetical protein
blastp_kegg lcl|vvi:100243874 10 209 + 200 Gaps:2 54.16 373 65.84 4e-83 peroxisome biogenesis protein 3-2-like
blastp_kegg lcl|fve:101313513 3 211 + 209 Gaps:2 56.56 366 59.90 3e-81 peroxisome biogenesis protein 3-2-like isoform 1
blastp_kegg lcl|gmx:100782816 10 209 + 200 Gaps:3 53.93 369 62.31 2e-80 peroxisome biogenesis protein 3-2-like
blastp_kegg lcl|rcu:RCOM_0571710 10 207 + 198 Gaps:1 53.35 373 62.81 1e-79 amino acid transporter putative
blastp_kegg lcl|sot:102578667 13 211 + 199 Gaps:1 54.20 369 58.50 3e-78 peroxisome biogenesis protein 3-2-like
blastp_kegg lcl|pvu:PHAVU_002G327400g 10 209 + 200 Gaps:3 53.93 369 59.30 4e-78 hypothetical protein
blastp_kegg lcl|gmx:100778748 10 209 + 200 Gaps:3 53.93 369 60.30 7e-78 peroxisome biogenesis protein 3-2-like
blastp_uniprot_sprot sp|Q8S9K7|PEX32_ARATH 10 209 + 200 Gaps:7 54.12 364 55.84 1e-69 Peroxisome biogenesis protein 3-2 OS Arabidopsis thaliana GN PEX3-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LDG7|PEX31_ARATH 13 209 + 197 Gaps:11 52.51 358 57.45 2e-63 Peroxisome biogenesis protein 3-1 OS Arabidopsis thaliana GN PEX3-1 PE 2 SV 2
rpsblast_cdd gnl|CDD|203111 8 208 + 201 Gaps:27 53.13 399 23.58 8e-22 pfam04882 Peroxin-3 Peroxin-3. Peroxin-3 is a peroxisomal protein. It is thought to be involve in membrane vesicle assembly prior to the translocation of matrix proteins.
rpsblast_kog gnl|CDD|39645 13 207 + 195 Gaps:15 55.71 359 25.00 6e-27 KOG4444 KOG4444 KOG4444 Peroxisomal assembly protein PEX3 [Cell wall/membrane/envelope biogenesis Intracellular trafficking secretion and vesicular transport].

1 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 10 208 199 PF04882 none Peroxin-3 IPR006966

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting