Protein : Qrob_P0437740.2 Q. robur
Protein Identifier  ? Qrob_P0437740.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR13301:SF33 - CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 1 [UDP-FORMING] (PTHR13301:SF33) Code Enzyme  EC:2.4.1.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 1100  
Kegg Orthology  K10999
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0030244 cellulose biosynthetic process The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.
GO:0016760 cellulose synthase (UDP-forming) activity Catalysis of the reaction: UDP-glucose + ((1,4)-beta-D-glucosyl)(n) = UDP + ((1,4)-beta-D-glucosyl)(n+1).

31 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100254408 1 1099 + 1099 Gaps:15 88.56 1224 94.74 0.0 cellulose synthase A catalytic subunit 1 [UDP-forming]-like
blastp_kegg lcl|pper:PRUPE_ppa000611mg 1 1099 + 1099 Gaps:27 100.00 1072 95.24 0.0 hypothetical protein
blastp_kegg lcl|pmum:103319684 1 1099 + 1099 Gaps:27 100.00 1072 95.06 0.0 cellulose synthase A catalytic subunit 1 [UDP-forming]
blastp_kegg lcl|cic:CICLE_v10007296mg 1 1099 + 1099 Gaps:14 100.00 1085 93.92 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_038394 1 1099 + 1099 Gaps:14 100.00 1085 94.01 0.0 Cellulose synthase 1
blastp_kegg lcl|pxb:103940242 1 1099 + 1099 Gaps:27 100.00 1072 94.87 0.0 cellulose synthase A catalytic subunit 1 [UDP-forming]
blastp_kegg lcl|pxb:103946683 1 1099 + 1099 Gaps:27 100.00 1072 94.87 0.0 cellulose synthase A catalytic subunit 1 [UDP-forming]
blastp_kegg lcl|mdm:103430335 1 1099 + 1099 Gaps:27 100.00 1072 94.68 0.0 cellulose synthase A catalytic subunit 1 [UDP-forming]
blastp_kegg lcl|mdm:103456192 1 1099 + 1099 Gaps:27 100.00 1072 94.40 0.0 cellulose synthase A catalytic subunit 1 [UDP-forming]-like
blastp_kegg lcl|cmo:103503814 1 1099 + 1099 Gaps:18 100.00 1081 94.08 0.0 cellulose synthase A catalytic subunit 1 [UDP-forming]
blastp_pdb 1weo_A 26 97 + 72 none 77.42 93 77.78 2e-34 mol:protein length:93 cellulose synthase catalytic subunit (IRX3)
blastp_uniprot_sprot sp|O48946|CESA1_ARATH 1 1097 + 1097 Gaps:21 99.91 1081 87.78 0.0 Cellulose synthase A catalytic subunit 1 [UDP-forming] OS Arabidopsis thaliana GN CESA1 PE 1 SV 1
blastp_uniprot_sprot sp|Q6AT26|CESA1_ORYSJ 1 1099 + 1099 Gaps:37 100.00 1076 85.69 0.0 Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS Oryza sativa subsp. japonica GN CESA1 PE 2 SV 1
blastp_uniprot_sprot sp|A2Y0X2|CESA1_ORYSI 1 1099 + 1099 Gaps:37 100.00 1076 85.69 0.0 Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS Oryza sativa subsp. indica GN CESA1 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SKJ5|CESAA_ARATH 7 1087 + 1081 Gaps:41 99.15 1065 82.95 0.0 Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS Arabidopsis thaliana GN CESA10 PE 2 SV 1
blastp_uniprot_sprot sp|Q941L0|CESA3_ARATH 20 1099 + 1080 Gaps:43 100.00 1065 72.02 0.0 Cellulose synthase A catalytic subunit 3 [UDP-forming] OS Arabidopsis thaliana GN CESA3 PE 1 SV 2
blastp_uniprot_sprot sp|Q84ZN6|CESA8_ORYSJ 29 1099 + 1071 Gaps:66 99.26 1081 72.79 0.0 Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS Oryza sativa subsp. japonica GN CESA8 PE 2 SV 1
blastp_uniprot_sprot sp|Q84M43|CESA2_ORYSJ 37 1099 + 1063 Gaps:66 99.07 1073 72.62 0.0 Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS Oryza sativa subsp. japonica GN CESA2 PE 2 SV 1
blastp_uniprot_sprot sp|A2XN66|CESA2_ORYSI 37 1099 + 1063 Gaps:66 99.07 1073 72.62 0.0 Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS Oryza sativa subsp. indica GN CESA2 PE 3 SV 1
blastp_uniprot_sprot sp|Q69V23|CESA3_ORYSJ 1 1099 + 1099 Gaps:51 99.91 1093 69.41 0.0 Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS Oryza sativa subsp. japonica GN CESA3 PE 2 SV 1
blastp_uniprot_sprot sp|Q851L8|CESA5_ORYSJ 1 1099 + 1099 Gaps:50 99.91 1092 69.39 0.0 Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS Oryza sativa subsp. japonica GN CESA5 PE 2 SV 1
rpsblast_cdd gnl|CDD|178022 1 1099 + 1099 Gaps:16 100.00 1085 93.36 0.0 PLN02400 PLN02400 cellulose synthase.
rpsblast_cdd gnl|CDD|178244 20 1099 + 1080 Gaps:43 100.00 1079 73.22 0.0 PLN02638 PLN02638 cellulose synthase A (UDP-forming) catalytic subunit.
rpsblast_cdd gnl|CDD|178055 1 1099 + 1099 Gaps:34 99.91 1094 66.97 0.0 PLN02436 PLN02436 cellulose synthase A.
rpsblast_cdd gnl|CDD|178503 23 1099 + 1077 Gaps:96 99.90 1044 68.26 0.0 PLN02915 PLN02915 cellulose synthase A [UDP-forming] catalytic subunit.
rpsblast_cdd gnl|CDD|177841 1 1099 + 1099 Gaps:85 100.00 1040 71.54 0.0 PLN02189 PLN02189 cellulose synthase.
rpsblast_cdd gnl|CDD|146277 358 1094 + 737 Gaps:23 100.00 716 82.54 0.0 pfam03552 Cellulose_synt Cellulose synthase. Cellulose an aggregate of unbranched polymers of beta-1 4-linked glucose residues is the major component of wood and thus paper and is synthesised by plants most algae some bacteria and fungi and even some animals. The genes that synthesise cellulose in higher plants differ greatly from the well-characterized genes found in Acetobacter and Agrobacterium sp. More correctly designated as 'cellulose synthase catalytic subunits' plant cellulose synthase (CesA) proteins are integral membrane proteins approximately 1 000 amino acids in length. There are a number of highly conserved residues including several motifs shown to be necessary for processive glycosyltransferase activity.
rpsblast_cdd gnl|CDD|177846 37 1099 + 1063 Gaps:36 98.16 977 70.28 0.0 PLN02195 PLN02195 cellulose synthase A.
rpsblast_cdd gnl|CDD|177890 208 1093 + 886 Gaps:154 78.77 1135 52.13 0.0 PLN02248 PLN02248 cellulose synthase-like protein.
rpsblast_cdd gnl|CDD|177842 283 1077 + 795 Gaps:138 96.96 756 37.11 1e-125 PLN02190 PLN02190 cellulose synthase-like protein.

31 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 908 931 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1020 1024 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 274 274 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 943 962 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 358 1090 733 PF03552 none Cellulose synthase IPR005150
Phobius 897 907 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 248 1092 845 PTHR13301 none none none
PANTHER 203 225 23 PTHR13301 none none none
PANTHER 10 135 126 PTHR13301 none none none
Phobius 294 304 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 875 896 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1059 1079 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1025 1047 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 275 293 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 305 324 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 963 995 33 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 23 113 91 G3DSA:3.30.40.10 none none IPR013083
SUPERFAMILY 22 112 91 SSF57850 none none none
Phobius 1080 1099 20 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 28 107 80 PF14569 "KEGG:00500+2.4.1.12","MetaCyc:PWY-1001","UniPathway:UPA00695" Zinc-binding RING-finger IPR027934
Phobius 1048 1058 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 996 1019 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 248 1092 845 PTHR13301:SF33 none none none
PANTHER 203 225 23 PTHR13301:SF33 none none none
PANTHER 10 135 126 PTHR13301:SF33 none none none
Coils 456 477 22 Coil none none none
Phobius 325 874 550 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 932 942 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 376 419 44 SSF53448 none none IPR029044
SUPERFAMILY 519 672 154 SSF53448 none none IPR029044

6 Localization

Analysis Start End Length
TMHMM 1060 1079 19
TMHMM 1025 1047 22
TMHMM 993 1015 22
TMHMM 874 896 22
TMHMM 908 930 22
TMHMM 945 967 22

19 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

0 Targeting