Protein : Qrob_P0437390.2 Q. robur
Protein Identifier  ? Qrob_P0437390.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=3) PTHR11910 - ATP SYNTHASE DELTA CHAIN Gene Prediction Quality  validated
Protein length 

Sequence

Length: 130  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0015986 ATP synthesis coupled proton transport The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0014s09760g 6 127 + 122 none 44.36 275 60.66 2e-43 POPTRDRAFT_572432 ATP synthase delta chain-related family protein
blastp_kegg lcl|cic:CICLE_v10021230mg 6 128 + 123 none 38.92 316 54.47 8e-42 hypothetical protein
blastp_kegg lcl|cit:102611636 6 127 + 122 none 51.48 237 54.10 2e-41 ATP synthase subunit delta chloroplastic-like
blastp_kegg lcl|rcu:RCOM_0715620 6 129 + 124 none 54.63 227 62.10 5e-41 ATP synthase delta chain putative (EC:3.6.3.14)
blastp_kegg lcl|sot:102598933 6 122 + 117 Gaps:2 50.00 238 54.62 2e-35 ATP synthase delta chain chloroplastic-like
blastp_kegg lcl|sly:101249084 6 122 + 117 Gaps:2 48.97 243 54.62 3e-35 ATP synthase delta chain chloroplastic-like
blastp_kegg lcl|pvu:PHAVU_006G115400g 35 129 + 95 none 44.19 215 64.21 3e-34 hypothetical protein
blastp_kegg lcl|csv:101203855 6 124 + 119 none 52.42 227 49.58 7e-33 ATP synthase delta chain chloroplastic-like
blastp_kegg lcl|cam:101489929 20 127 + 108 Gaps:1 43.43 251 57.80 1e-32 ATP synthase delta chain chloroplastic-like
blastp_kegg lcl|pper:PRUPEppa1027122mg 6 129 + 124 Gaps:30 42.34 222 69.15 2e-31 hypothetical protein
blastp_uniprot_sprot sp|P11402|ATPD_SPIOL 6 124 + 119 none 46.30 257 33.61 2e-20 ATP synthase delta chain chloroplastic OS Spinacia oleracea GN ATPD PE 1 SV 2
blastp_uniprot_sprot sp|P32980|ATPD_TOBAC 6 124 + 119 none 47.98 248 28.57 2e-15 ATP synthase delta chain chloroplastic OS Nicotiana tabacum GN ATPD PE 2 SV 1
blastp_uniprot_sprot sp|Q02758|ATPD_PEA 11 124 + 114 none 45.42 251 29.82 5e-15 ATP synthase delta chain chloroplastic OS Pisum sativum GN ATPD PE 1 SV 1
blastp_uniprot_sprot sp|Q07300|ATPD_SORBI 6 118 + 113 none 45.75 247 30.09 1e-14 ATP synthase delta chain chloroplastic OS Sorghum bicolor GN ATPD PE 2 SV 1
blastp_uniprot_sprot sp|Q42687|ATPD_CHLRE 15 124 + 110 none 50.23 219 27.27 1e-13 ATP synthase delta chain chloroplastic OS Chlamydomonas reinhardtii GN ATPD PE 1 SV 1
blastp_uniprot_sprot sp|A2BYH7|ATPD_PROM5 6 124 + 119 Gaps:2 66.11 180 25.21 3e-06 ATP synthase subunit delta OS Prochlorococcus marinus (strain MIT 9515) GN atpH PE 3 SV 1
blastp_uniprot_sprot sp|A3PEU0|ATPD_PROM0 6 124 + 119 Gaps:2 66.11 180 23.53 5e-06 ATP synthase subunit delta OS Prochlorococcus marinus (strain MIT 9301) GN atpH PE 3 SV 1
blastp_uniprot_sprot sp|A5GV73|ATPD_SYNR3 51 116 + 66 none 36.46 181 31.82 9e-06 ATP synthase subunit delta OS Synechococcus sp. (strain RCC307) GN atpH PE 3 SV 1
rpsblast_cdd gnl|CDD|189453 6 124 + 119 Gaps:3 69.01 171 26.27 8e-13 pfam00213 OSCP ATP synthase delta (OSCP) subunit. The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.
rpsblast_cdd gnl|CDD|180239 8 124 + 117 Gaps:4 64.97 177 27.83 5e-11 PRK05758 PRK05758 F0F1 ATP synthase subunit delta Validated.
rpsblast_cdd gnl|CDD|184049 7 112 + 106 Gaps:1 59.12 181 20.56 6e-09 PRK13429 PRK13429 F0F1 ATP synthase subunit delta Provisional.
rpsblast_cdd gnl|CDD|130215 15 124 + 110 Gaps:9 63.37 172 29.36 9e-08 TIGR01145 ATP_synt_delta ATP synthase F1 delta subunit. This model describes the ATP synthase delta subunit in bacteria mitochondria and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit membrane associated enzyme found in bacteria and organelles of higher eukaryotes namely mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity.
rpsblast_cdd gnl|CDD|31056 6 124 + 119 Gaps:3 66.29 178 26.27 9e-08 COG0712 AtpH F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein) [Energy production and conversion].

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 7 124 118 PTHR11910 none none IPR000711
Gene3D 7 81 75 G3DSA:1.10.520.20 none none IPR026015
Pfam 12 124 113 PF00213 none ATP synthase delta (OSCP) subunit IPR000711
SUPERFAMILY 6 81 76 SSF47928 none none IPR026015

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting