Protein : Qrob_P0437380.2 Q. robur
Protein Identifier  ? Qrob_P0437380.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K02113 - F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 235  
Kegg Orthology  K02113
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0015986 ATP synthesis coupled proton transport The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism.

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10021230mg 1 232 + 232 Gaps:8 74.68 316 51.27 2e-69 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0715620 1 234 + 234 Gaps:19 100.00 227 55.51 2e-67 ATP synthase delta chain putative (EC:3.6.3.14)
blastp_kegg lcl|cit:102611636 1 232 + 232 Gaps:8 99.58 237 50.85 1e-66 ATP synthase subunit delta chloroplastic-like
blastp_kegg lcl|pop:POPTR_0014s09760g 1 233 + 233 Gaps:9 85.09 275 52.14 1e-64 POPTRDRAFT_572432 ATP synthase delta chain-related family protein
blastp_kegg lcl|pper:PRUPEppa1027122mg 1 234 + 234 Gaps:42 95.50 222 59.91 2e-63 hypothetical protein
blastp_kegg lcl|pmum:103332167 1 234 + 234 Gaps:42 100.00 212 59.43 5e-63 ATP synthase delta chain chloroplastic
blastp_kegg lcl|sot:102598933 1 227 + 227 Gaps:14 96.22 238 50.66 3e-59 ATP synthase delta chain chloroplastic-like
blastp_kegg lcl|sly:101249084 1 227 + 227 Gaps:13 95.47 243 49.57 5e-59 ATP synthase delta chain chloroplastic-like
blastp_kegg lcl|pvu:PHAVU_006G115400g 1 234 + 234 Gaps:33 100.00 215 53.02 3e-58 hypothetical protein
blastp_kegg lcl|mtr:MTR_7g117900 1 234 + 234 Gaps:17 100.00 225 49.78 4e-54 ATP synthase delta chain
blastp_uniprot_sprot sp|P11402|ATPD_SPIOL 87 229 + 143 none 55.64 257 34.97 6e-26 ATP synthase delta chain chloroplastic OS Spinacia oleracea GN ATPD PE 1 SV 2
blastp_uniprot_sprot sp|P32980|ATPD_TOBAC 87 229 + 143 none 57.66 248 31.47 8e-22 ATP synthase delta chain chloroplastic OS Nicotiana tabacum GN ATPD PE 2 SV 1
blastp_uniprot_sprot sp|Q07300|ATPD_SORBI 87 222 + 136 none 55.06 247 31.62 3e-18 ATP synthase delta chain chloroplastic OS Sorghum bicolor GN ATPD PE 2 SV 1
blastp_uniprot_sprot sp|Q02758|ATPD_PEA 96 229 + 134 none 53.39 251 29.85 6e-18 ATP synthase delta chain chloroplastic OS Pisum sativum GN ATPD PE 1 SV 1
blastp_uniprot_sprot sp|Q42687|ATPD_CHLRE 85 229 + 145 Gaps:1 66.67 219 27.40 1e-15 ATP synthase delta chain chloroplastic OS Chlamydomonas reinhardtii GN ATPD PE 1 SV 1
blastp_uniprot_sprot sp|B7KKR5|ATPD_CYAP7 81 222 + 142 Gaps:2 77.17 184 25.35 5e-10 ATP synthase subunit delta OS Cyanothece sp. (strain PCC 7424) GN atpH PE 3 SV 1
blastp_uniprot_sprot sp|B0JWV0|ATPD_MICAN 85 229 + 145 Gaps:2 79.67 182 27.59 8e-10 ATP synthase subunit delta OS Microcystis aeruginosa (strain NIES-843) GN atpH PE 3 SV 1
blastp_uniprot_sprot sp|B2J057|ATPD_NOSP7 85 229 + 145 Gaps:2 78.80 184 27.59 3e-09 ATP synthase subunit delta OS Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN atpH PE 3 SV 1
blastp_uniprot_sprot sp|P12406|ATPD_NOSS1 85 229 + 145 Gaps:3 78.69 183 26.39 6e-09 ATP synthase subunit delta OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN atpH PE 3 SV 1
blastp_uniprot_sprot sp|Q3M9V9|ATPD_ANAVT 85 229 + 145 Gaps:3 78.69 183 26.39 7e-09 ATP synthase subunit delta OS Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN atpH PE 3 SV 1
rpsblast_cdd gnl|CDD|189453 87 229 + 143 Gaps:3 83.04 171 28.17 4e-21 pfam00213 OSCP ATP synthase delta (OSCP) subunit. The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.
rpsblast_cdd gnl|CDD|180239 90 229 + 140 Gaps:3 77.40 177 27.01 3e-18 PRK05758 PRK05758 F0F1 ATP synthase subunit delta Validated.
rpsblast_cdd gnl|CDD|184049 90 217 + 128 Gaps:1 71.27 181 21.71 2e-15 PRK13429 PRK13429 F0F1 ATP synthase subunit delta Provisional.
rpsblast_cdd gnl|CDD|31056 90 229 + 140 Gaps:3 78.09 178 26.62 2e-14 COG0712 AtpH F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein) [Energy production and conversion].
rpsblast_cdd gnl|CDD|130215 87 229 + 143 Gaps:10 83.14 172 30.07 1e-13 TIGR01145 ATP_synt_delta ATP synthase F1 delta subunit. This model describes the ATP synthase delta subunit in bacteria mitochondria and chloroplasts. It is sometimes called OSCP for Oligomycin Sensitivity Conferring Protein. F1/F0-ATP synthase is a multisubunit membrane associated enzyme found in bacteria and organelles of higher eukaryotes namely mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Delta subunit belongs to the F1 cluster or sector and functionally implicated in the overall stability of the complex. Expression of truncated forms of this subunit results in low ATPase activity.
rpsblast_kog gnl|CDD|36875 72 229 + 158 Gaps:8 79.05 210 22.29 6e-17 KOG1662 KOG1662 KOG1662 Mitochondrial F1F0-ATP synthase subunit OSCP/ATP5 [Energy production and conversion].

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 86 105 20 PR00125 none ATP synthase delta subunit signature IPR000711
PRINTS 155 166 12 PR00125 none ATP synthase delta subunit signature IPR000711
PRINTS 166 180 15 PR00125 none ATP synthase delta subunit signature IPR000711
SUPERFAMILY 87 186 100 SSF47928 none none IPR026015
TIGRFAM 87 229 143 TIGR01145 none ATP_synt_delta: ATP synthase F1, delta subunit IPR000711
PANTHER 86 229 144 PTHR11910:SF1 none none none
PANTHER 86 229 144 PTHR11910 none none IPR000711
Gene3D 88 186 99 G3DSA:1.10.520.20 none none IPR026015
Pfam 87 229 143 PF00213 none ATP synthase delta (OSCP) subunit IPR000711

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting