Protein : Qrob_P0434280.2 Q. robur
Protein Identifier  ? Qrob_P0434280.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K10733 - GINS complex subunit 2 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 223  
Kegg Orthology  K10733
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0006260 DNA replication The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.

31 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100780528 1 205 + 205 none 97.62 210 81.46 7e-120 DNA replication complex GINS protein PSF2-like
blastp_kegg lcl|pvu:PHAVU_001G1147000 1 205 + 205 none 97.62 210 79.02 2e-118 hypothetical protein
blastp_kegg lcl|cam:101502711 1 205 + 205 none 97.62 210 80.00 2e-116 DNA replication complex GINS protein PSF2-like
blastp_kegg lcl|cam:101496215 1 205 + 205 none 97.62 210 80.00 2e-116 DNA replication complex GINS protein PSF2-like
blastp_kegg lcl|cmo:103501165 1 205 + 205 none 97.16 211 74.15 2e-113 DNA replication complex GINS protein PSF2
blastp_kegg lcl|vvi:100264816 1 205 + 205 none 97.62 210 77.07 2e-113 DNA replication complex GINS protein PSF2-like
blastp_kegg lcl|tcc:TCM_042758 1 205 + 205 Gaps:1 97.61 209 77.94 2e-113 PSF2 isoform 1
blastp_kegg lcl|csv:101225953 1 203 + 203 none 95.75 212 73.89 9e-113 DNA replication complex GINS protein PSF2-like
blastp_kegg lcl|csv:101212053 1 203 + 203 none 95.75 212 73.89 9e-113 DNA replication complex GINS protein PSF2-like
blastp_kegg lcl|fve:101311515 1 205 + 205 Gaps:1 97.17 212 76.21 2e-112 DNA replication complex GINS protein PSF2-like
blastp_pdb 2q9q_E 7 179 + 173 Gaps:3 91.10 191 41.38 5e-42 mol:protein length:191 DNA replication complex GINS protein PSF2
blastp_pdb 2q9q_A 7 179 + 173 Gaps:3 91.10 191 41.38 5e-42 mol:protein length:191 DNA replication complex GINS protein PSF2
blastp_pdb 2eho_K 11 179 + 169 Gaps:3 91.40 186 41.18 5e-42 mol:protein length:186 DNA replication complex GINS protein PSF2
blastp_pdb 2eho_G 11 179 + 169 Gaps:3 91.40 186 41.18 5e-42 mol:protein length:186 DNA replication complex GINS protein PSF2
blastp_pdb 2eho_C 11 179 + 169 Gaps:3 91.40 186 41.18 5e-42 mol:protein length:186 DNA replication complex GINS protein PSF2
blastp_pdb 2e9x_F 12 179 + 168 Gaps:3 91.35 185 41.42 1e-41 mol:protein length:185 DNA replication complex GINS protein PSF2
blastp_pdb 2e9x_B 12 179 + 168 Gaps:3 91.35 185 41.42 1e-41 mol:protein length:185 DNA replication complex GINS protein PSF2
blastp_uniprot_sprot sp|Q9C7A8|PSF2_ARATH 1 205 + 205 Gaps:1 97.14 210 69.12 1e-99 DNA replication complex GINS protein PSF2 OS Arabidopsis thaliana GN GINS2 PE 2 SV 2
blastp_uniprot_sprot sp|Q9D600|PSF2_MOUSE 12 179 + 168 Gaps:3 91.35 185 43.20 3e-42 DNA replication complex GINS protein PSF2 OS Mus musculus GN Gins2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9Y248|PSF2_HUMAN 12 179 + 168 Gaps:3 91.35 185 41.42 4e-41 DNA replication complex GINS protein PSF2 OS Homo sapiens GN GINS2 PE 1 SV 1
blastp_uniprot_sprot sp|Q7ZT46|PSF2_XENLA 14 194 + 181 Gaps:5 98.38 185 40.11 6e-40 DNA replication complex GINS protein PSF2 OS Xenopus laevis GN gins2 PE 2 SV 1
blastp_uniprot_sprot sp|Q54BL9|PSF2_DICDI 16 167 + 152 Gaps:6 70.85 223 41.77 1e-35 Probable DNA replication complex GINS protein PSF2 OS Dictyostelium discoideum GN gins2 PE 3 SV 1
blastp_uniprot_sprot sp|Q8IHI1|PSF2_BRUMA 12 167 + 156 Gaps:13 82.63 190 38.85 2e-32 Probable DNA replication complex GINS protein PSF2 OS Brugia malayi GN BMBAC01P19.06 PE 3 SV 1
blastp_uniprot_sprot sp|P0CQ30|PSF2_CRYNJ 12 145 + 134 none 72.43 185 41.04 3e-32 DNA replication complex GINS protein PSF2 OS Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN PSF2 PE 3 SV 1
blastp_uniprot_sprot sp|P0CQ31|PSF2_CRYNB 12 145 + 134 none 72.43 185 41.04 3e-32 DNA replication complex GINS protein PSF2 OS Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) GN PSF2 PE 3 SV 1
blastp_uniprot_sprot sp|O94329|PSF2_SCHPO 12 179 + 168 Gaps:3 90.16 183 40.00 1e-31 DNA replication complex GINS protein psf2 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN psf2 PE 1 SV 1
blastp_uniprot_sprot sp|Q6BZ44|PSF2_DEBHA 16 195 + 180 Gaps:4 87.38 206 33.33 1e-27 DNA replication complex GINS protein PSF2 OS Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN PSF2 PE 3 SV 2
rpsblast_cdd gnl|CDD|34696 12 170 + 159 Gaps:3 85.41 185 34.81 9e-32 COG5093 COG5093 Uncharacterized conserved protein [Function unknown].
rpsblast_cdd gnl|CDD|203349 53 163 + 111 Gaps:11 100.00 106 25.47 1e-14 pfam05916 Sld5 GINS complex protein. The eukaryotic GINS complex is essential for the initiation and elongation phases of DNA replication. It consists of four paralogous protein subunits (Sld5 Psf1 Psf2 and Psf3) all of which are included in this family. The GINS complex is conserved from yeast to humans and has been shown in human to bind directly to DNA primase.
rpsblast_cdd gnl|CDD|185576 56 181 + 126 Gaps:18 28.39 479 26.47 1e-08 PTZ00362 PTZ00362 hypothetical protein Provisional.

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 54 162 109 PF05916 none GINS complex protein IPR021151
SUPERFAMILY 73 181 109 SSF158573 none none none
SUPERFAMILY 12 71 60 SSF160059 none none none
PANTHER 7 214 208 PTHR12772 none none IPR007257
PIRSF 2 207 206 PIRSF028998 none none IPR007257

0 Localization

0 Qtllist

0 Targeting