Protein : Qrob_P0434200.2 Q. robur
Protein Identifier  ? Qrob_P0434200.2 Organism . Name  Quercus robur
Score  81.1 Score Type  egn
Protein Description  (M=1) K12397 - AP-3 complex subunit beta Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1263  
Kegg Orthology  K12397
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0016192 vesicle-mediated transport A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
GO:0030117 membrane coat Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules.
GO:0030123 AP-3 adaptor complex A heterotetrameric AP-type membrane coat adaptor complex that consists of beta3, delta, mu3 and sigma3 subunits and is found associated with endosomal membranes. AP-3 does not appear to associate with clathrin in all organisms. In at least humans, the AP-3 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different genes (beta3A and beta3B, mu3A and mu3B, and sigma3A and sigma3B).

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa000482mg 1 1258 + 1258 Gaps:43 99.65 1136 73.59 0.0 hypothetical protein
blastp_kegg lcl|pmum:103332661 1 1256 + 1256 Gaps:51 99.47 1136 73.54 0.0 AP3-complex subunit beta-A
blastp_kegg lcl|tcc:TCM_042748 1 1259 + 1259 Gaps:51 99.91 1134 75.99 0.0 Affected trafxn cking 2 isoform 1
blastp_kegg lcl|rcu:RCOM_0001270 1 1255 + 1255 Gaps:51 100.00 1121 73.33 0.0 hypothetical protein
blastp_kegg lcl|pxb:103935513 1 1258 + 1258 Gaps:55 99.64 1124 72.59 0.0 AP3-complex subunit beta-A
blastp_kegg lcl|cam:101499754 1 1257 + 1257 Gaps:56 99.56 1127 72.64 0.0 AP3-complex subunit beta-A-like
blastp_kegg lcl|mdm:103434048 1 1258 + 1258 Gaps:58 99.47 1129 71.59 0.0 AP3-complex subunit beta-A-like
blastp_kegg lcl|fve:101307051 1 1258 + 1258 Gaps:50 99.65 1129 71.47 0.0 AP3-complex subunit beta-A-like
blastp_kegg lcl|gmx:100802718 1 1259 + 1259 Gaps:54 99.65 1130 72.38 0.0 AP3-complex subunit beta-A-like
blastp_kegg lcl|vvi:100251289 1 1262 + 1262 Gaps:51 100.00 1140 73.25 0.0 AP3-complex subunit beta-A-like
blastp_pdb 2vgl_B 41 638 + 598 Gaps:60 77.16 591 34.21 1e-27 mol:protein length:591 AP-2 COMPLEX SUBUNIT BETA-1
blastp_pdb 2jkt_E 41 638 + 598 Gaps:60 77.16 591 34.21 1e-27 mol:protein length:591 AP-2 COMPLEX SUBUNIT BETA-1
blastp_pdb 2jkt_B 41 638 + 598 Gaps:60 77.16 591 34.21 1e-27 mol:protein length:591 AP-2 COMPLEX SUBUNIT BETA-1
blastp_pdb 2jkr_E 41 638 + 598 Gaps:60 77.16 591 34.21 1e-27 mol:protein length:591 AP-2 COMPLEX SUBUNIT BETA-1
blastp_pdb 2jkr_B 41 638 + 598 Gaps:60 77.16 591 34.21 1e-27 mol:protein length:591 AP-2 COMPLEX SUBUNIT BETA-1
blastp_pdb 2xa7_B 41 638 + 598 Gaps:60 77.03 592 34.21 1e-27 mol:protein length:592 AP-2 COMPLEX SUBUNIT BETA
blastp_pdb 1w63_L 101 638 + 538 Gaps:34 72.43 584 34.04 4e-24 mol:protein length:584 ADAPTER-RELATED PROTEIN COMPLEX 1 BETA 1 SUBU
blastp_pdb 1w63_J 101 638 + 538 Gaps:34 72.43 584 34.04 4e-24 mol:protein length:584 ADAPTER-RELATED PROTEIN COMPLEX 1 BETA 1 SUBU
blastp_pdb 1w63_H 101 638 + 538 Gaps:34 72.43 584 34.04 4e-24 mol:protein length:584 ADAPTER-RELATED PROTEIN COMPLEX 1 BETA 1 SUBU
blastp_pdb 1w63_F 101 638 + 538 Gaps:34 72.43 584 34.04 4e-24 mol:protein length:584 ADAPTER-RELATED PROTEIN COMPLEX 1 BETA 1 SUBU
blastp_uniprot_sprot sp|Q9M2T1|AP3BA_ARATH 157 1258 + 1102 Gaps:40 99.59 987 62.67 0.0 AP3-complex subunit beta-A OS Arabidopsis thaliana GN AP3BA PE 2 SV 2
blastp_uniprot_sprot sp|Q13367|AP3B2_HUMAN 3 1256 + 1254 Gaps:179 71.26 1082 36.96 2e-100 AP-3 complex subunit beta-2 OS Homo sapiens GN AP3B2 PE 1 SV 2
blastp_uniprot_sprot sp|Q9JME5|AP3B2_MOUSE 3 1256 + 1254 Gaps:181 71.26 1082 36.96 7e-99 AP-3 complex subunit beta-2 OS Mus musculus GN Ap3b2 PE 1 SV 2
blastp_uniprot_sprot sp|Q32PG1|AP3B1_BOVIN 30 650 + 621 Gaps:112 48.43 1084 40.19 1e-95 AP-3 complex subunit beta-1 OS Bos taurus GN AP3B1 PE 2 SV 1
blastp_uniprot_sprot sp|Q7YRF1|AP3B1_CANFA 6 650 + 645 Gaps:109 50.41 1091 39.09 5e-95 AP-3 complex subunit beta-1 OS Canis familiaris GN AP3B1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9Z1T1|AP3B1_MOUSE 6 650 + 645 Gaps:112 49.86 1105 39.02 6e-94 AP-3 complex subunit beta-1 OS Mus musculus GN Ap3b1 PE 1 SV 2
blastp_uniprot_sprot sp|O00203|AP3B1_HUMAN 30 650 + 621 Gaps:112 47.99 1094 40.57 2e-91 AP-3 complex subunit beta-1 OS Homo sapiens GN AP3B1 PE 1 SV 3
blastp_uniprot_sprot sp|Q556J8|AP3B_DICDI 37 630 + 594 Gaps:67 42.24 1108 39.32 1e-45 AP-3 complex subunit beta OS Dictyostelium discoideum GN ap3b-1 PE 3 SV 1
blastp_uniprot_sprot sp|O13939|AP3B_SCHPO 5 635 + 631 Gaps:55 66.04 745 34.15 4e-36 AP-3 complex subunit beta OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN apl6 PE 1 SV 1
blastp_uniprot_sprot sp|Q54X82|AP1B_DICDI 43 638 + 596 Gaps:149 49.79 942 31.77 3e-29 AP-1 complex subunit beta OS Dictyostelium discoideum GN ap1b1 PE 3 SV 1

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1167 1260 94 PTHR11134:SF1 none none IPR026740
PANTHER 368 640 273 PTHR11134:SF1 none none IPR026740
Pfam 963 1036 74 PF14796 none Clathrin-adaptor complex-3 beta-1 subunit C-terminal IPR029390
Gene3D 727 829 103 G3DSA:1.25.10.10 none none IPR011989
Gene3D 36 274 239 G3DSA:1.25.10.10 none none IPR011989
Gene3D 372 639 268 G3DSA:1.25.10.10 none none IPR011989
Pfam 39 762 724 PF01602 none Adaptin N terminal region IPR002553
PANTHER 102 305 204 PTHR11134 none none IPR026739
PANTHER 1167 1260 94 PTHR11134 none none IPR026739
PANTHER 1021 1150 130 PTHR11134 none none IPR026739
PANTHER 102 305 204 PTHR11134:SF1 none none IPR026740
PANTHER 1021 1150 130 PTHR11134:SF1 none none IPR026740
PANTHER 4 73 70 PTHR11134:SF1 none none IPR026740
SUPERFAMILY 36 72 37 SSF48371 none none IPR016024
SUPERFAMILY 372 638 267 SSF48371 none none IPR016024
SUPERFAMILY 101 274 174 SSF48371 none none IPR016024
SUPERFAMILY 723 765 43 SSF48371 none none IPR016024
PANTHER 368 640 273 PTHR11134 none none IPR026739
PANTHER 727 903 177 PTHR11134:SF1 none none IPR026740
PANTHER 727 903 177 PTHR11134 none none IPR026739
PANTHER 4 73 70 PTHR11134 none none IPR026739

0 Localization

0 Qtllist

0 Targeting