Protein : Qrob_P0433500.2 Q. robur
Protein Identifier  ? Qrob_P0433500.2 Organism . Name  Quercus robur
Score  77.4 Score Type  egn
Protein Description  (M=2) K03963 - NADH dehydrogenase (ubiquinone) 1 beta subcomplex 7 [EC:1.6.5.3 1.6.99.3] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 80  
Kegg Orthology  K03963
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005739 mitochondrion A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
GO:0008137 NADH dehydrogenase (ubiquinone) activity Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol.
GO:0003954 NADH dehydrogenase activity Catalysis of the reaction: NADH + H+ + acceptor = NAD+ + reduced acceptor.

13 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100245635 13 78 + 66 none 66.00 100 69.70 5e-25 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like
blastp_kegg lcl|mdm:103403466 13 78 + 66 Gaps:2 66.67 102 72.06 1e-24 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like
blastp_kegg lcl|pxb:103943138 13 78 + 66 Gaps:2 66.67 102 72.06 1e-24 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
blastp_kegg lcl|cic:CICLE_v10017277mg 13 78 + 66 Gaps:3 66.99 103 68.12 3e-23 hypothetical protein
blastp_kegg lcl|cit:102610853 13 78 + 66 Gaps:3 66.99 103 68.12 3e-23 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like
blastp_kegg lcl|pmum:103321008 13 78 + 66 Gaps:2 66.67 102 70.59 5e-23 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7
blastp_kegg lcl|pper:PRUPE_ppa013794mg 13 78 + 66 Gaps:2 66.67 102 70.59 5e-23 hypothetical protein
blastp_kegg lcl|pop:POPTR_0008s14130g 13 78 + 66 Gaps:1 66.34 101 70.15 2e-22 POPTRDRAFT_657050 hypothetical protein
blastp_kegg lcl|brp:103854024 13 78 + 66 Gaps:1 72.22 90 67.69 5e-22 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like
blastp_kegg lcl|eus:EUTSA_v10005178mg 13 78 + 66 Gaps:2 66.67 102 64.71 7e-22 hypothetical protein
blastp_uniprot_sprot sp|Q9SKC9|NDUB7_ARATH 13 78 + 66 Gaps:3 66.99 103 63.77 5e-23 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 OS Arabidopsis thaliana GN At2g02050 PE 3 SV 1
rpsblast_cdd gnl|CDD|147693 14 52 + 39 none 59.09 66 48.72 6e-08 pfam05676 NDUF_B7 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7). This family consists of several NADH-ubiquinone oxidoreductase B18 subunit proteins from different eukaryotic organisms. Oxidative phosphorylation is the well-characterized process in which ATP the principal carrier of chemical energy of individual cells is produced due to a mitochondrial proton gradient formed by the transfer of electrons from NADH and FADH2 to molecular oxygen. The oxidative phosphorylation (OXPHOS) system is located in the mitochondrial inner membrane and consists of five multi-subunit enzyme complexes and two small electron carriers: coenzyme Q10 and cytochrome C. At least 70 structural proteins involved in the formation of the whole OXPHOS system are encoded by nuclear genes whereas 13 structural proteins are encoded by the mitochondrial genome. Deficiency of NADH ubiquinone oxidoreductase the first enzyme complex of the mitochondrial respiratory chain is one of the most frequent causes of human mitochondrial encephalomyopathies.
rpsblast_kog gnl|CDD|38678 14 78 + 65 Gaps:1 51.56 128 43.94 6e-10 KOG3468 KOG3468 KOG3468 NADH:ubiquinone oxidoreductase NDUFB7/B18 subunit [Energy production and conversion].

1 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 14 52 39 PF05676 none NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) IPR008698

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting