Protein : Qrob_P0433310.2 Q. robur
Protein Identifier  ? Qrob_P0433310.2 Organism . Name  Quercus robur
Score  57.0 Score Type  egn
Protein Description  (M=4) 2.7.4.1 - Polyphosphate kinase. Code Enzyme  EC:2.7.4.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 1236  
Kegg Orthology  K05577
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0008137 NADH dehydrogenase (ubiquinone) activity Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol.
GO:0042773 ATP synthesis coupled electron transport The transfer of electrons through a series of electron donors and acceptors, generating energy that is ultimately used for synthesis of ATP.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_ORF00102 1 1226 + 1226 Gaps:45 99.73 749 78.71 0.0 ndhF NADH dehydrogenase subunit 5
blastp_kegg lcl|pmum:103323521 1 1188 + 1188 Gaps:41 100.00 707 81.19 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic
blastp_kegg lcl|pmum:18668087 1 1226 + 1226 Gaps:41 100.00 745 80.81 0.0 ndhF CP95_p018 NADH-plastoquinone oxidoreductase subunit 5
blastp_kegg lcl|fve:10251579 1 1226 + 1226 Gaps:41 99.73 747 80.94 0.0 ndhF FvH4_C0101 NADH-plastoquinone oxidoreductase subunit 5
blastp_kegg lcl|pper:PrpeC_p069 1 1220 + 1220 Gaps:41 99.60 742 81.19 0.0 ndhF NADH-plastoquinone oxidoreductase subunit 5
blastp_kegg lcl|tcc:ThcaC_p077 1 1225 + 1225 Gaps:55 99.73 743 79.76 0.0 ndhF NADH-plastoquinone oxidoreductase subunit 5
blastp_kegg lcl|csv:3429258 1 1225 + 1225 Gaps:43 99.60 748 78.93 0.0 ndhF ndh5 CsCp132 NADH dehydrogenase subunit 5
blastp_kegg lcl|pop:Poptr_cp077 1 1206 + 1206 Gaps:55 96.45 760 78.85 0.0 ndhF NADH dehydrogenase subunit 5
blastp_kegg lcl|sot:4099901 1 1222 + 1222 Gaps:59 99.05 739 78.96 0.0 ndhF ndh5 SotuCp071 NADH dehydrogenase subunit 5
blastp_kegg lcl|sot:102603357 1 1200 + 1200 Gaps:59 99.86 714 78.96 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic-like
blastp_pdb 3rko_B 71 950 + 880 Gaps:38 64.11 613 44.02 3e-91 mol:protein length:613 NADH-QUINONE OXIDOREDUCTASE SUBUNIT L
blastp_pdb 3rko_L 71 950 + 880 Gaps:38 64.11 613 44.02 3e-91 mol:protein length:613 NADH-QUINONE OXIDOREDUCTASE SUBUNIT L
blastp_pdb 3rko_C 90 983 + 894 Gaps:71 75.25 509 32.38 2e-19 mol:protein length:509 NADH-QUINONE OXIDOREDUCTASE SUBUNIT M
blastp_pdb 3rko_M 90 983 + 894 Gaps:71 75.25 509 32.38 2e-19 mol:protein length:509 NADH-QUINONE OXIDOREDUCTASE SUBUNIT M
blastp_pdb 3rko_D 139 828 + 690 Gaps:43 68.66 485 27.03 2e-11 mol:protein length:485 NADH-QUINONE OXIDOREDUCTASE SUBUNIT N
blastp_pdb 3rko_N 139 828 + 690 Gaps:43 68.66 485 27.03 2e-11 mol:protein length:485 NADH-QUINONE OXIDOREDUCTASE SUBUNIT N
blastp_uniprot_sprot sp|B1NWJ6|NU5C_MANES 1 1230 + 1230 Gaps:45 99.87 752 78.96 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Manihot esculenta GN ndhF PE 3 SV 1
blastp_uniprot_sprot sp|Q49KV1|NU5C_EUCGG 1 1205 + 1205 Gaps:43 98.50 734 81.05 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Eucalyptus globulus subsp. globulus GN ndhF PE 3 SV 1
blastp_uniprot_sprot sp|Q2QD43|NU5C_CUCSA 1 1225 + 1225 Gaps:43 99.60 748 79.19 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Cucumis sativus GN ndhF PE 3 SV 1
blastp_uniprot_sprot sp|Q32091|NU5C_CARTI 1 1226 + 1226 Gaps:45 99.73 743 78.68 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Carthamus tinctorius GN ndhF PE 3 SV 1
blastp_uniprot_sprot sp|P51095|NU5C_ADEHI 1 1229 + 1229 Gaps:48 100.00 744 78.76 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Adenocaulon himalaicum GN ndhF PE 3 SV 1
blastp_uniprot_sprot sp|Q14FB0|NU5C_POPAL 1 1206 + 1206 Gaps:55 96.45 760 78.85 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Populus alba GN ndhF PE 3 SV 1
blastp_uniprot_sprot sp|A4GYW4|NU5C_POPTR 1 1206 + 1206 Gaps:55 96.45 760 78.85 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Populus trichocarpa GN ndhF PE 3 SV 1
blastp_uniprot_sprot sp|Q32551|NU5C_MUTAC 1 1229 + 1229 Gaps:48 100.00 744 78.49 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Mutisia acuminata GN ndhF PE 3 SV 1
blastp_uniprot_sprot sp|P51099|NU5C_ATRJA 1 1225 + 1225 Gaps:47 98.93 749 78.54 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Atractylodes japonica GN ndhF PE 3 SV 1
blastp_uniprot_sprot sp|Q8S8V0|NU5C_ATRBE 1 1229 + 1229 Gaps:60 100.00 740 78.51 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Atropa belladonna GN ndhF PE 3 SV 1
rpsblast_cdd gnl|CDD|176967 1 1230 + 1230 Gaps:65 100.00 741 82.46 0.0 CHL00025 ndhF NADH dehydrogenase subunit 5.
rpsblast_cdd gnl|CDD|180952 1 1223 + 1223 Gaps:73 93.76 673 50.55 0.0 PRK07376 PRK07376 NAD(P)H-quinone oxidoreductase subunit F Validated.
rpsblast_cdd gnl|CDD|180633 7 1233 + 1227 Gaps:102 98.24 624 42.58 1e-147 PRK06590 PRK06590 NADH:ubiquinone oxidoreductase subunit L Reviewed.
rpsblast_cdd gnl|CDD|200148 45 935 + 891 Gaps:44 66.34 609 50.74 1e-127 TIGR01974 NDH_I_L proton-translocating NADH-quinone oxidoreductase chain L. This model describes the 12th (based on E. coli) structural gene L of bacterial NADH dehydrogenase I as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex.

80 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 188 210 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 449 548 100 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 41 61 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 843 847 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 927 1026 100 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 734 753 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 355 374 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 715 901 187 PF00361 "Reactome:REACT_6305" NADH-Ubiquinone/plastoquinone (complex I), various chains IPR001750
Pfam 142 423 282 PF00361 "Reactome:REACT_6305" NADH-Ubiquinone/plastoquinone (complex I), various chains IPR001750
Phobius 874 891 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 168 187 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 6 29 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 903 926 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 222 240 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 375 393 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 821 842 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 549 570 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 313 327 15 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 848 867 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 5 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 1012 1047 36 PTHR22773:SF76 none none none
Phobius 283 287 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 776 780 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PRINTS 91 116 26 PR01434 none NADH-ubiquinone oxidoreductase chain 5 signature none
PRINTS 259 285 27 PR01434 none NADH-ubiquinone oxidoreductase chain 5 signature none
PRINTS 327 339 13 PR01434 none NADH-ubiquinone oxidoreductase chain 5 signature none
PRINTS 166 187 22 PR01434 none NADH-ubiquinone oxidoreductase chain 5 signature none
PRINTS 237 258 22 PR01434 none NADH-ubiquinone oxidoreductase chain 5 signature none
PRINTS 119 139 21 PR01434 none NADH-ubiquinone oxidoreductase chain 5 signature none
PRINTS 436 455 20 PR01434 none NADH-ubiquinone oxidoreductase chain 5 signature none

26 Localization

Analysis Start End Length
TMHMM 548 570 22
TMHMM 89 111 22
TMHMM 260 282 22
TMHMM 875 894 19
TMHMM 222 240 18
TMHMM 355 374 19
TMHMM 782 804 22
TMHMM 425 447 22
TMHMM 1208 1230 22
TMHMM 753 775 22
TMHMM 715 733 18
TMHMM 1085 1107 22
TMHMM 607 629 22
TMHMM 848 865 17
TMHMM 289 311 22
TMHMM 680 702 22
TMHMM 903 925 22
TMHMM 188 210 22
TMHMM 326 348 22
TMHMM 1026 1048 22
TMHMM 121 143 22
TMHMM 394 416 22
TMHMM 39 61 22
TMHMM 148 168 20
TMHMM 7 29 22
TMHMM 819 841 22

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting