Protein : Qrob_P0433250.2 Q. robur
Protein Identifier  ? Qrob_P0433250.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) KOG1351//KOG1352//KOG1353 - Vacuolar H+-ATPase V1 sector subunit B [Energy production and conversion]. // Vacuolar H+-ATPase V1 sector subunit A [Energy production and conversion]. // F0F1-type ATP synthase alpha subunit [Energy production and conversion]. Code Enzyme  EC:3.6.3.14
Gene Prediction Quality  validated Protein length 

Sequence

Length: 477  
Kegg Orthology  K02111
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0 Synonyms

10 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0015991 ATP hydrolysis coupled proton transport The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis.
GO:0016820 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane.
GO:0046961 proton-transporting ATPase activity, rotational mechanism Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism.
GO:0015986 ATP synthesis coupled proton transport The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled.
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism.
GO:0015992 proton transport The directed movement of protons (hydrogen ions) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0046034 ATP metabolic process The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator.
GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain A protein complex that forms part of a proton-transporting two-sector ATPase complex and catalyzes ATP hydrolysis or synthesis. The catalytic domain (F1, V1, or A1) comprises a hexameric catalytic core and a central stalk, and is peripherally associated with the membrane when the two-sector ATPase is assembled.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_ORF00014 1 476 + 476 Gaps:31 100.00 507 86.39 0.0 atpA ATP synthase CF1 alpha subunit
blastp_kegg lcl|vvi:7498527 1 475 + 475 Gaps:31 99.80 507 85.97 0.0 atpA ViviM_p099 ATPase alpha subunit
blastp_kegg lcl|vvi:4025114 1 475 + 475 Gaps:31 99.80 507 85.57 0.0 atpA ViviCp006 ATP synthase CF1 alpha subunit
blastp_kegg lcl|pmum:18668002 1 476 + 476 Gaps:31 100.00 507 85.21 0.0 atpA CP95_p082 ATP synthase CF1 alpha subunit
blastp_kegg lcl|pper:PrpeC_p006 1 476 + 476 Gaps:31 100.00 507 84.81 0.0 atpA ATP synthase CF1 alpha subunit
blastp_kegg lcl|sot:4099854 1 475 + 475 Gaps:31 99.80 507 84.78 0.0 atpA SotuCp006 ATP synthase CF1 alpha subunit
blastp_kegg lcl|sly:3950425 1 475 + 475 Gaps:31 99.80 507 84.78 0.0 atpA LyesC2p084 ATP synthase CF1 alpha subunit
blastp_kegg lcl|cit:4271228 1 475 + 475 Gaps:31 99.80 507 84.58 0.0 atpA CisiCp006 ATP synthase CF1 alpha subunit
blastp_kegg lcl|tcc:ThcaC_p006 1 475 + 475 Gaps:31 100.00 506 84.98 0.0 atpA ATP synthase CF1 alpha subunit
blastp_kegg lcl|fve:10251490 1 476 + 476 Gaps:31 100.00 507 84.62 0.0 atpA FvH4_C0012 ATP synthase CF1 alpha subunit
blastp_pdb 1kmh_A 1 475 + 475 Gaps:31 99.80 507 83.60 0.0 mol:protein length:507 ATPase alpha subunit
blastp_pdb 1fx0_A 1 475 + 475 Gaps:31 99.80 507 83.60 0.0 mol:protein length:507 ATP SYNTHASE ALPHA CHAIN
blastp_pdb 2qe7_C 2 448 + 447 Gaps:31 95.22 502 57.11 0.0 mol:protein length:502 ATP synthase subunit alpha
blastp_pdb 2qe7_B 2 448 + 447 Gaps:31 95.22 502 57.11 0.0 mol:protein length:502 ATP synthase subunit alpha
blastp_pdb 2qe7_A 2 448 + 447 Gaps:31 95.22 502 57.11 0.0 mol:protein length:502 ATP synthase subunit alpha
blastp_pdb 1sky_B 2 466 + 465 Gaps:37 100.00 502 54.18 0.0 mol:protein length:502 F1-ATPASE
blastp_pdb 2r9v_A 4 465 + 462 Gaps:32 95.92 515 52.02 2e-177 mol:protein length:515 ATP synthase subunit alpha
blastp_pdb 3zry_C 8 470 + 463 Gaps:39 98.43 510 52.99 9e-177 mol:protein length:510 ATP SYNTHASE SUBUNIT ALPHA MITOCHONDRIAL
blastp_pdb 3zry_B 8 470 + 463 Gaps:39 98.43 510 52.99 9e-177 mol:protein length:510 ATP SYNTHASE SUBUNIT ALPHA MITOCHONDRIAL
blastp_pdb 3zry_A 8 470 + 463 Gaps:39 98.43 510 52.99 9e-177 mol:protein length:510 ATP SYNTHASE SUBUNIT ALPHA MITOCHONDRIAL
blastp_uniprot_sprot sp|Q0ZJ35|ATPA_VITVI 1 475 + 475 Gaps:31 99.80 507 85.57 0.0 ATP synthase subunit alpha chloroplastic OS Vitis vinifera GN atpA PE 3 SV 1
blastp_uniprot_sprot sp|Q3C1H4|ATPA_NICSY 1 475 + 475 Gaps:31 99.80 507 85.38 0.0 ATP synthase subunit alpha chloroplastic OS Nicotiana sylvestris GN atpA PE 1 SV 1
blastp_uniprot_sprot sp|Q33C53|ATPA_NICTO 1 475 + 475 Gaps:31 99.80 507 85.38 0.0 ATP synthase subunit alpha chloroplastic OS Nicotiana tomentosiformis GN atpA PE 3 SV 1
blastp_uniprot_sprot sp|Q09X32|ATPA_MORIN 1 476 + 476 Gaps:31 100.00 507 85.21 0.0 ATP synthase subunit alpha chloroplastic OS Morus indica GN atpA PE 3 SV 1
blastp_uniprot_sprot sp|B1NWD5|ATPA_MANES 1 476 + 476 Gaps:31 100.00 507 85.60 0.0 ATP synthase subunit alpha chloroplastic OS Manihot esculenta GN atpA PE 3 SV 1
blastp_uniprot_sprot sp|Q09G61|ATPA_PLAOC 1 475 + 475 Gaps:31 99.80 507 85.38 0.0 ATP synthase subunit alpha chloroplastic OS Platanus occidentalis GN atpA PE 3 SV 1
blastp_uniprot_sprot sp|A6MM21|ATPA_BUXMI 1 475 + 475 Gaps:31 99.80 507 85.38 0.0 ATP synthase subunit alpha chloroplastic OS Buxus microphylla GN atpA PE 3 SV 1
blastp_uniprot_sprot sp|Q0G9X7|ATPA_DAUCA 1 476 + 476 Gaps:31 100.00 507 84.62 0.0 ATP synthase subunit alpha chloroplastic OS Daucus carota GN atpA PE 3 SV 1
blastp_uniprot_sprot sp|Q27S65|ATPA_SOLTU 1 475 + 475 Gaps:31 99.80 507 84.78 0.0 ATP synthase subunit alpha chloroplastic OS Solanum tuberosum GN atpA PE 3 SV 1
blastp_uniprot_sprot sp|Q2MIB5|ATPA_SOLLC 1 475 + 475 Gaps:31 99.80 507 84.78 0.0 ATP synthase subunit alpha chloroplastic OS Solanum lycopersicum GN atpA PE 3 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 3 94 92 G3DSA:2.40.30.20 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" none IPR023366
SUPERFAMILY 97 339 243 SSF52540 none none IPR027417
Gene3D 342 470 129 G3DSA:1.20.150.20 none none none
TIGRFAM 125 470 346 TIGR00962 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" atpA: ATP synthase F1, alpha subunit IPR005294
Pfam 31 93 63 PF02874 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" ATP synthase alpha/beta family, beta-barrel domain IPR004100
Pfam 346 437 92 PF00306 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" ATP synthase alpha/beta chain, C terminal domain IPR000793
PANTHER 1 471 471 PTHR15184 none none none
ProSitePatterns 325 334 10 PS00152 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" ATP synthase alpha and beta subunits signature. IPR020003
Hamap 2 471 470 MF_01346 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" ATP synthase subunit alpha [atpA]. IPR005294
Pfam 125 334 210 PF00006 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" ATP synthase alpha/beta family, nucleotide-binding domain IPR000194
PANTHER 1 471 471 PTHR15184:SF37 none none none
Gene3D 126 340 215 G3DSA:3.40.50.300 none none IPR027417
SUPERFAMILY 342 470 129 SSF47917 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" none IPR000793
SUPERFAMILY 11 95 85 SSF50615 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" none IPR004100

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting