Protein : Qrob_P0423370.2 Q. robur
Protein Identifier  ? Qrob_P0423370.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=1) PTHR11361//PTHR11361:SF83 - DNA MISMATCH REPAIR MUTS RELATED PROTEINS // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1076  
Kegg Orthology  K08737
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0006298 mismatch repair A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination.
GO:0030983 mismatched DNA binding Interacting selectively and non-covalently with double-stranded DNA containing one or more mismatches.

45 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103340953 1 1075 + 1075 Gaps:64 100.00 1097 73.84 0.0 DNA mismatch repair protein MSH7
blastp_kegg lcl|pper:PRUPE_ppa000647mg 1 1075 + 1075 Gaps:54 100.00 1053 76.16 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_037911 1 1071 + 1071 Gaps:49 99.63 1076 74.07 0.0 MUTS isoform 1
blastp_kegg lcl|rcu:RCOM_1053350 1 1073 + 1073 Gaps:64 100.00 1089 73.74 0.0 DNA mismatch repair protein MSH6-2 putative
blastp_kegg lcl|cit:102617856 1 1071 + 1071 Gaps:54 99.64 1105 72.03 0.0 DNA mismatch repair protein MSH7-like
blastp_kegg lcl|cic:CICLE_v10007291mg 1 1071 + 1071 Gaps:54 99.64 1105 71.93 0.0 hypothetical protein
blastp_kegg lcl|vvi:100260983 1 1075 + 1075 Gaps:56 99.02 1122 73.00 0.0 MSH7 DNA mismatch repair protein Msh6-2
blastp_kegg lcl|fve:101307930 1 1075 + 1075 Gaps:55 100.00 1072 74.53 0.0 DNA mismatch repair protein MSH7-like
blastp_kegg lcl|pxb:103943839 1 1075 + 1075 Gaps:66 100.00 1097 72.29 0.0 DNA mismatch repair protein MSH7-like
blastp_kegg lcl|pxb:103938841 1 1075 + 1075 Gaps:66 100.00 1097 72.11 0.0 DNA mismatch repair protein MSH7-like
blastp_pdb 2o8f_B 198 1005 + 808 Gaps:77 71.53 1022 38.71 4e-71 mol:protein length:1022 DNA mismatch repair protein MSH6
blastp_pdb 2o8e_B 198 1005 + 808 Gaps:77 71.53 1022 38.71 4e-71 mol:protein length:1022 DNA mismatch repair protein MSH6
blastp_pdb 2o8d_B 198 1005 + 808 Gaps:77 71.53 1022 38.71 4e-71 mol:protein length:1022 DNA mismatch repair protein MSH6
blastp_pdb 2o8c_B 198 1005 + 808 Gaps:77 71.53 1022 38.71 4e-71 mol:protein length:1022 DNA mismatch repair protein MSH6
blastp_pdb 2o8b_B 198 1005 + 808 Gaps:77 71.53 1022 38.71 4e-71 mol:protein length:1022 DNA mismatch repair protein MSH6
blastp_pdb 3thz_A 369 1012 + 644 Gaps:110 74.30 934 28.10 4e-59 mol:protein length:934 DNA mismatch repair protein Msh2
blastp_pdb 3thy_A 369 1012 + 644 Gaps:110 74.30 934 28.10 4e-59 mol:protein length:934 DNA mismatch repair protein Msh2
blastp_pdb 3thx_A 369 1012 + 644 Gaps:110 74.30 934 28.10 4e-59 mol:protein length:934 DNA mismatch repair protein Msh2
blastp_pdb 3thw_A 369 1012 + 644 Gaps:110 74.30 934 28.10 4e-59 mol:protein length:934 DNA mismatch repair protein Msh2
blastp_pdb 2o8f_A 369 1012 + 644 Gaps:110 74.30 934 28.10 4e-59 mol:protein length:934 DNA mismatch repair protein Msh2
blastp_uniprot_sprot sp|Q9SMV7|MSH7_ARATH 1 1071 + 1071 Gaps:60 99.64 1109 64.89 0.0 DNA mismatch repair protein MSH7 OS Arabidopsis thaliana GN MSH7 PE 1 SV 1
blastp_uniprot_sprot sp|B8CX98|MUTS_HALOH 231 1004 + 774 Gaps:115 88.28 896 30.72 3e-80 DNA mismatch repair protein MutS OS Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN mutS PE 3 SV 1
blastp_uniprot_sprot sp|Q0AYB5|MUTS_SYNWW 239 1004 + 766 Gaps:144 91.50 859 31.68 1e-77 DNA mismatch repair protein MutS OS Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) GN mutS PE 3 SV 1
blastp_uniprot_sprot sp|Q0AEI7|MUTS_NITEC 239 1036 + 798 Gaps:146 92.73 880 30.88 2e-73 DNA mismatch repair protein MutS OS Nitrosomonas eutropha (strain C91) GN mutS PE 3 SV 1
blastp_uniprot_sprot sp|A8MFD4|MUTS_ALKOO 231 1031 + 801 Gaps:132 92.84 880 29.62 4e-73 DNA mismatch repair protein MutS OS Alkaliphilus oremlandii (strain OhILAs) GN mutS PE 3 SV 2
blastp_uniprot_sprot sp|O74502|MSH6_SCHPO 197 1011 + 815 Gaps:54 61.48 1254 39.04 4e-71 DNA mismatch repair protein msh6 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN msh6 PE 1 SV 1
blastp_uniprot_sprot sp|Q895H2|MUTS_CLOTE 233 1004 + 772 Gaps:193 89.10 881 30.83 4e-71 DNA mismatch repair protein MutS OS Clostridium tetani (strain Massachusetts / E88) GN mutS PE 3 SV 1
blastp_uniprot_sprot sp|Q2JT35|MUTS_SYNJA 234 1017 + 784 Gaps:134 93.20 882 29.32 7e-71 DNA mismatch repair protein MutS OS Synechococcus sp. (strain JA-3-3Ab) GN mutS PE 3 SV 1
blastp_uniprot_sprot sp|Q045Q5|MUTS_LACGA 230 1055 + 826 Gaps:157 96.50 857 29.14 1e-70 DNA mismatch repair protein MutS OS Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN mutS PE 3 SV 1
blastp_uniprot_sprot sp|Q1IN52|MUTS_KORVE 239 1007 + 769 Gaps:151 91.16 882 30.35 2e-70 DNA mismatch repair protein MutS OS Koribacter versatilis (strain Ellin345) GN mutS PE 3 SV 1

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 536 795 260 SM00533 none DNA-binding domain of DNA mismatch repair MUTS family IPR007696
SMART 816 1012 197 SM00534 none ATPase domain of DNA mismatch repair MUTS family IPR000432
SUPERFAMILY 778 1009 232 SSF52540 none none IPR027417
Pfam 357 506 150 PF05188 none MutS domain II IPR007860
Pfam 237 348 112 PF01624 none MutS domain I IPR007695
SUPERFAMILY 523 753 231 SSF48334 none none IPR007696
Gene3D 223 349 127 G3DSA:3.40.1170.10 none none IPR016151
Pfam 780 1014 235 PF00488 none MutS domain V IPR000432
Gene3D 519 709 191 G3DSA:1.10.1420.10 none none none
ProSitePatterns 897 913 17 PS00486 none DNA mismatch repair proteins mutS family signature. IPR000432
SUPERFAMILY 223 344 122 SSF55271 none none IPR016151
PANTHER 140 1068 929 PTHR11361:SF83 none none none
Pfam 525 749 225 PF05192 none MutS domain III IPR007696
PANTHER 140 1068 929 PTHR11361 none none none
Gene3D 778 1009 232 G3DSA:3.40.50.300 none none IPR027417
SUPERFAMILY 452 535 84 SSF53150 none none IPR007860
SUPERFAMILY 357 418 62 SSF53150 none none IPR007860

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7

0 Targeting