Protein : Qrob_P0414090.2 Q. robur
Protein Identifier  ? Qrob_P0414090.2 Organism . Name  Quercus robur
Score  94.0 Score Type  egn
Protein Description  (M=2) PTHR19957:SF80 - SYNTAXIN-123-RELATED (PTHR19957:SF80) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 251  
Kegg Orthology  K08486
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0016192 vesicle-mediated transport A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
GO:0005484 SNAP receptor activity Acting as a marker to identify a membrane and interacting selectively with one or more SNAREs on another membrane to mediate membrane fusion.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|sly:101258590 4 250 + 247 Gaps:12 83.28 311 79.15 2e-132 putative syntaxin-131-like
blastp_kegg lcl|rcu:RCOM_1322390 4 250 + 247 Gaps:12 85.20 304 77.22 2e-129 syntaxin putative
blastp_kegg lcl|sot:102594156 6 250 + 245 Gaps:12 82.90 310 78.60 6e-129 syntaxin-132-like
blastp_kegg lcl|pop:POPTR_0019s05240g 17 250 + 234 Gaps:12 80.92 304 81.71 2e-128 POPTRDRAFT_836058 syntaxin 131 family protein
blastp_kegg lcl|sly:101266082 7 250 + 244 Gaps:12 82.58 310 78.52 5e-128 putative syntaxin-131-like
blastp_kegg lcl|tcc:TCM_025899 17 249 + 233 Gaps:12 74.02 331 82.86 8e-128 Syntaxin of plants 131 isoform 1
blastp_kegg lcl|cit:102626406 18 250 + 233 Gaps:12 80.07 306 83.27 2e-127 syntaxin-132-like
blastp_kegg lcl|cic:CICLE_v10021315mg 18 250 + 233 Gaps:12 87.19 281 83.27 5e-127 hypothetical protein
blastp_kegg lcl|sot:102589318 17 250 + 234 Gaps:12 79.10 311 80.89 3e-126 syntaxin-132-like
blastp_kegg lcl|cam:101504003 7 250 + 244 Gaps:12 83.39 307 75.78 1e-125 syntaxin-132-like
blastp_pdb 3c98_B 42 220 + 179 Gaps:18 66.31 279 28.11 2e-14 mol:protein length:279 Syntaxin-1A
blastp_pdb 3ipd_F 149 241 + 93 Gaps:1 84.40 109 40.22 3e-14 mol:protein length:109 Syntaxin-1A
blastp_pdb 3ipd_B 149 241 + 93 Gaps:1 84.40 109 40.22 3e-14 mol:protein length:109 Syntaxin-1A
blastp_pdb 3hd7_F 149 241 + 93 Gaps:1 84.40 109 40.22 3e-14 mol:protein length:109 Syntaxin-1A
blastp_pdb 3hd7_B 149 241 + 93 Gaps:1 84.40 109 40.22 3e-14 mol:protein length:109 Syntaxin-1A
blastp_pdb 2xhe_B 6 219 + 214 Gaps:12 79.57 279 25.68 7e-14 mol:protein length:279 SYNTAXIN1
blastp_pdb 1l4a_B 148 219 + 72 none 81.82 88 40.28 5e-12 mol:protein length:88 S-SYNTAXIN
blastp_pdb 1jth_D 149 220 + 72 none 93.51 77 40.28 7e-12 mol:protein length:77 syntaxin 1a
blastp_pdb 1jth_B 149 220 + 72 none 93.51 77 40.28 7e-12 mol:protein length:77 syntaxin 1a
blastp_pdb 1hvv_D 149 220 + 72 none 96.00 75 40.28 9e-12 mol:protein length:75 SYNTAXIN 1A
blastp_uniprot_sprot sp|Q9SRV7|SY131_ARATH 6 250 + 245 Gaps:12 83.99 306 70.82 1e-119 Putative syntaxin-131 OS Arabidopsis thaliana GN SYP131 PE 3 SV 1
blastp_uniprot_sprot sp|Q8VZU2|SY132_ARATH 18 250 + 233 Gaps:13 80.26 304 76.23 1e-109 Syntaxin-132 OS Arabidopsis thaliana GN SYP132 PE 1 SV 1
blastp_uniprot_sprot sp|O64791|SY124_ARATH 9 241 + 233 Gaps:12 80.86 303 45.71 2e-71 Syntaxin-124 OS Arabidopsis thaliana GN SYP124 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZQZ8|SY123_ARATH 17 225 + 209 Gaps:12 72.46 305 51.13 2e-68 Syntaxin-123 OS Arabidopsis thaliana GN SYP123 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SXB0|SY125_ARATH 17 225 + 209 Gaps:12 74.16 298 49.77 2e-66 Syntaxin-125 OS Arabidopsis thaliana GN SYP125 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZSD4|SY121_ARATH 4 247 + 244 Gaps:12 73.99 346 46.88 7e-66 Syntaxin-121 OS Arabidopsis thaliana GN SYP121 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SVC2|SY122_ARATH 8 247 + 240 Gaps:12 73.90 341 46.43 2e-62 Syntaxin-122 OS Arabidopsis thaliana GN SYP122 PE 1 SV 1
blastp_uniprot_sprot sp|Q42374|SY111_ARATH 19 223 + 205 Gaps:17 69.03 310 43.93 1e-48 Syntaxin-related protein KNOLLE OS Arabidopsis thaliana GN KN PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZPV9|SY112_ARATH 11 241 + 231 Gaps:15 77.38 305 32.63 2e-36 Syntaxin-112 OS Arabidopsis thaliana GN SYP112 PE 2 SV 2
blastp_uniprot_sprot sp|O70439|STX7_MOUSE 152 240 + 89 none 34.10 261 42.70 4e-18 Syntaxin-7 OS Mus musculus GN Stx7 PE 1 SV 3

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 154 216 63 PF05739 none SNARE domain IPR000727
SMART 1 112 112 SM00503 "Reactome:REACT_11184" Syntaxin N-terminal domain IPR006011
Phobius 221 241 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 149 211 63 PS50192 none t-SNARE coiled-coil homology domain profile. IPR000727
SUPERFAMILY 23 204 182 SSF47661 none none IPR010989
SMART 144 211 68 SM00397 none Helical region found in SNAREs IPR000727
Phobius 242 250 9 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 142 241 100 G3DSA:1.20.5.110 none none none
PANTHER 4 241 238 PTHR19957:SF80 none none none
Pfam 7 97 91 PF00804 "Reactome:REACT_11184" Syntaxin IPR006011
PANTHER 4 241 238 PTHR19957 none none none
ProSitePatterns 155 194 40 PS00914 "Reactome:REACT_11184" Syntaxin / epimorphin family signature. IPR006012
Gene3D 9 117 109 G3DSA:1.20.58.70 none none none
Coils 90 111 22 Coil none none none
Phobius 1 220 220 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

1 Localization

Analysis Start End Length
TMHMM 222 241 19

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8

0 Targeting