Protein : Qrob_P0413610.2 Q. robur
Protein Identifier  ? Qrob_P0413610.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) PTHR11743:SF29 - MITOCHONDRIAL OUTER MEMBRANE PROTEIN PORIN 2-RELATED (PTHR11743:SF29) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 277  
Kegg Orthology  K15040
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0005741 mitochondrial outer membrane The outer, i.e. cytoplasm-facing, lipid bilayer of the mitochondrial envelope.
GO:0006820 anion transport The directed movement of anions, atoms or small molecules with a net negative charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0008308 voltage-gated anion channel activity Enables the transmembrane transfer of an anion by a voltage-gated channel. An anion is a negatively charged ion. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.
GO:0044070 regulation of anion transport Any process that modulates the frequency, rate or extent of the directed movement of anions, atoms or small molecules with a net negative charge into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103336695 1 276 + 276 none 100.00 276 86.23 2e-172 mitochondrial outer membrane protein porin 2-like
blastp_kegg lcl|pxb:103967759 1 276 + 276 none 100.00 276 85.87 5e-172 mitochondrial outer membrane protein porin 2
blastp_kegg lcl|pxb:103945751 1 276 + 276 none 100.00 276 85.87 5e-172 mitochondrial outer membrane protein porin 2-like
blastp_kegg lcl|cic:CICLE_v10026251mg 1 276 + 276 none 100.00 276 85.14 7e-172 hypothetical protein
blastp_kegg lcl|cit:102620853 1 276 + 276 none 100.00 276 85.14 7e-172 mitochondrial outer membrane protein porin 2-like
blastp_kegg lcl|pper:PRUPE_ppa009821mg 1 276 + 276 none 100.00 276 85.87 1e-171 hypothetical protein
blastp_kegg lcl|pxb:103952642 1 276 + 276 none 100.00 276 85.14 1e-170 mitochondrial outer membrane protein porin 2-like
blastp_kegg lcl|mdm:103418369 1 276 + 276 none 100.00 276 85.14 1e-170 mitochondrial outer membrane protein porin 2-like
blastp_kegg lcl|vvi:100266220 1 276 + 276 none 100.00 276 84.78 6e-170 mitochondrial outer membrane protein porin of 36 kDa-like
blastp_kegg lcl|csv:101226894 1 276 + 276 none 100.00 276 83.33 8e-169 mitochondrial outer membrane protein porin 2-like
blastp_uniprot_sprot sp|Q9FJX3|VDAC2_ARATH 1 276 + 276 none 100.00 276 75.00 4e-155 Mitochondrial outer membrane protein porin 2 OS Arabidopsis thaliana GN VDAC2 PE 1 SV 1
blastp_uniprot_sprot sp|Q84P97|VDAC5_ORYSJ 3 276 + 274 none 98.92 277 64.96 4e-126 Mitochondrial outer membrane protein porin 5 OS Oryza sativa subsp. japonica GN VDAC5 PE 2 SV 1
blastp_uniprot_sprot sp|P42055|VDAC1_SOLTU 1 276 + 276 none 100.00 276 53.26 2e-96 Mitochondrial outer membrane protein porin of 34 kDa OS Solanum tuberosum PE 1 SV 2
blastp_uniprot_sprot sp|P42056|VDAC2_SOLTU 1 276 + 276 none 100.00 276 51.81 3e-95 Mitochondrial outer membrane protein porin of 36 kDa OS Solanum tuberosum PE 1 SV 2
blastp_uniprot_sprot sp|P42054|VDAC_PEA 1 276 + 276 none 100.00 276 50.36 5e-92 Outer plastidial membrane protein porin OS Pisum sativum GN POR1 PE 1 SV 2
blastp_uniprot_sprot sp|Q6K548|VDAC1_ORYSJ 4 276 + 273 Gaps:3 99.27 274 50.74 1e-90 Mitochondrial outer membrane protein porin 1 OS Oryza sativa subsp. japonica GN VDAC1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9SMX3|VDAC3_ARATH 1 276 + 276 Gaps:4 100.00 274 51.09 3e-89 Mitochondrial outer membrane protein porin 3 OS Arabidopsis thaliana GN VDAC3 PE 1 SV 3
blastp_uniprot_sprot sp|Q9SRH5|VDAC1_ARATH 1 276 + 276 none 100.00 276 49.64 5e-89 Mitochondrial outer membrane protein porin 1 OS Arabidopsis thaliana GN VDAC1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9M2W6|VDAC5_ARATH 1 276 + 276 Gaps:50 100.00 226 63.72 4e-88 Putative mitochondrial outer membrane protein porin 5 OS Arabidopsis thaliana GN VDAC5 PE 5 SV 1
blastp_uniprot_sprot sp|Q10S27|VDAC6_ORYSJ 1 276 + 276 none 100.00 276 46.74 4e-87 Mitochondrial outer membrane protein porin 6 OS Oryza sativa subsp. japonica GN VDAC6 PE 2 SV 1
rpsblast_cdd gnl|CDD|201807 4 269 + 266 Gaps:10 100.00 272 40.81 2e-67 pfam01459 Porin_3 Eukaryotic porin.
rpsblast_cdd gnl|CDD|132767 5 275 + 271 Gaps:11 100.00 276 36.59 2e-65 cd07306 Porin3_VDAC Voltage-dependent anion channel of the outer mitochondrial membrane. The voltage-dependent anion channel (VDAC) regulates the flux of mostly anionic metabolites through the outer mitochondrial membrane which is highly permeable to small molecules. VDAC is the most abundant protein in the outer membrane and membrane potentials can toggle VDAC between open or high-conducting and closed or low-conducting forms. VDAC binds to and is regulated in part by hexokinase an interaction that renders mitochondria less susceptible to pro-apoptotic signals most likely by intefering with VDAC's capability to respond to Bcl-2 family proteins. While VDAC appears to play a key role in mitochondrially induced cell death a proposed involvement in forming the mitochondrial permeability transition pore which is characteristic for damaged mitochondria and apoptosis has been challenged by more recent studies.
rpsblast_cdd gnl|CDD|132766 5 274 + 270 Gaps:53 98.57 279 21.82 7e-09 cd07305 Porin3_Tom40 Translocase of outer mitochondrial membrane 40 (Tom40). Tom40 forms a channel in the mitochondrial outer membrane with a pore about 1.5 to 2.5 nanometers wide. It functions as a transport channel for unfolded protein chains and forms a complex with Tom5 Tom6 Tom7 and Tom22. The primary receptors Tom20 and Tom70 recruit the unfolded precursor protein from the mitochondrial-import stimulating factor (MSF) or cytosolic Hsc70. The precursor passes through the Tom40 channel and through another channel in the inner membrane formed by Tim23 to be finally translocated into the mitochondrial matrix. The process depends on a proton motive force across the inner membrane and requires a contact site where the outer and inner membranes come close. Tom40 is also involved in inserting outer membrane proteins into the membrane most likely not via a lateral opening in the pore but by transfering precursor proteins to an outer membrane sorting and assembly machinery.
rpsblast_cdd gnl|CDD|132765 8 272 + 265 Gaps:23 99.27 274 23.16 2e-08 cd07303 Porin3 Eukaryotic porin family that forms channels in the mitochondrial outer membrane. The porin family 3 contains two sub-families that play vital roles in the mitochondrial outer membrane a translocase for unfolded pre-proteins (Tom40) and the voltage-dependent anion channel (VDAC) that regulates the flux of mostly anionic metabolites through the outer mitochondrial membrane.
rpsblast_kog gnl|CDD|38336 2 276 + 275 Gaps:12 100.00 281 28.47 9e-60 KOG3126 KOG3126 KOG3126 Porin/voltage-dependent anion-selective channel protein [Inorganic ion transport and metabolism].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 276 276 PTHR11743 none none none
PANTHER 1 276 276 PTHR11743:SF29 none none none
Gene3D 1 275 275 G3DSA:2.40.160.10 none none IPR023614
Pfam 5 269 265 PF01459 none Eukaryotic porin IPR027246
ProSitePatterns 219 241 23 PS00558 none Eukaryotic mitochondrial porin signature. IPR001925

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9

0 Targeting