Protein : Qrob_P0410950.2 Q. robur
Protein Identifier  ? Qrob_P0410950.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) KOG0078//KOG0079//KOG0080//KOG0084//KOG0086//KOG0087//KOG0092//KOG0095//KOG0097//KOG0098 - GTP-binding protein SEC4 small G protein superfamily and related Ras family GTP-binding proteins [Signal transduction mechanisms Intracellular trafficking secretion and vesicular transport]. // GTP-binding protein H-ray small G protein superfamily [General function prediction only]. // GTPase Rab18 small G protein superfamily [General function prediction only]. // GTPase Rab1/YPT1 small G protein superfamily and related GTP-binding proteins [Signal transduction mechanisms Intracellular trafficking secretion and vesicular transport]. // GTPase Rab4 small G protein superfamily [Intracellular trafficking secretion and vesicular transport]. // GTPase Rab11/YPT3 small G protein superfamily [Intracellular trafficking secretion and vesicular transport]. // GTPase Rab5/YPT51 and related small G protein superfamily GTPases [Intracellular trafficking secretion and vesicular transport]. // GTPase Rab30 small G protein superfamily [Intracellular trafficking secretion and vesicular transport]. // GTPase Rab14 small G protein superfamily [Intracellular trafficking secretion and vesicular transport]. // GTPase Rab2 small G protein superfamily [Intracellular trafficking secretion and vesicular transport]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 218  
Kegg Orthology  K07904
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0 Synonyms

9 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0015031 protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0007264 small GTPase mediated signal transduction Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO:0006913 nucleocytoplasmic transport The directed movement of molecules between the nucleus and the cytoplasm.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102626353 1 216 + 216 none 99.54 217 94.91 2e-150 ras-related protein RABA1f-like
blastp_kegg lcl|tcc:TCM_031673 1 216 + 216 none 99.54 217 94.44 2e-150 RAB GTPase A1F
blastp_kegg lcl|tcc:TCM_029778 1 216 + 216 none 99.54 217 94.91 3e-150 RAB GTPase A1F
blastp_kegg lcl|gmx:100805995 1 216 + 216 none 99.54 217 93.52 7e-150 ras-related protein RABA1f-like
blastp_kegg lcl|pper:PRUPE_ppa011260mg 1 216 + 216 none 99.54 217 94.91 8e-150 hypothetical protein
blastp_kegg lcl|vvi:100264083 1 216 + 216 none 99.54 217 94.44 9e-150 ras-related protein RABA1f-like
blastp_kegg lcl|cit:102618870 1 216 + 216 none 99.54 217 93.98 1e-149 ras-related protein RABA1f-like
blastp_kegg lcl|pmum:103325089 1 216 + 216 none 99.54 217 94.44 2e-149 ras-related protein RABA1f
blastp_kegg lcl|pmum:103326021 3 216 + 214 none 99.07 216 95.33 3e-149 ras-related protein RABA1f
blastp_kegg lcl|pper:PRUPE_ppa011278mg 3 216 + 214 none 99.07 216 95.33 3e-149 hypothetical protein
blastp_pdb 2f9m_A 10 183 + 174 none 87.44 199 79.31 3e-100 mol:protein length:199 RAB11B member RAS oncogene family
blastp_pdb 2f9l_A 10 183 + 174 none 87.44 199 79.31 3e-100 mol:protein length:199 RAB11B member RAS oncogene family
blastp_pdb 1oiv_B 7 175 + 169 none 88.48 191 81.07 8e-99 mol:protein length:191 RAS-RELATED PROTEIN RAB-11A
blastp_pdb 1oiv_A 7 175 + 169 none 88.48 191 81.07 8e-99 mol:protein length:191 RAS-RELATED PROTEIN RAB-11A
blastp_pdb 2gzh_A 7 175 + 169 none 97.69 173 80.47 1e-97 mol:protein length:173 Ras-related protein Rab-11A
blastp_pdb 2gzd_B 7 175 + 169 none 97.69 173 80.47 1e-97 mol:protein length:173 Ras-related protein Rab-11A
blastp_pdb 2gzd_A 7 175 + 169 none 97.69 173 80.47 1e-97 mol:protein length:173 Ras-related protein Rab-11A
blastp_pdb 1oix_A 7 175 + 169 none 88.48 191 80.47 2e-97 mol:protein length:191 RAS-RELATED PROTEIN RAB-11A
blastp_pdb 1oiw_A 7 175 + 169 none 88.48 191 80.47 2e-97 mol:protein length:191 RAS-RELATED PROTEIN RAB-11A
blastp_pdb 1yzk_A 10 177 + 168 none 91.30 184 80.36 2e-97 mol:protein length:184 Ras-related protein Rab-11A
blastp_uniprot_sprot sp|Q9FJH0|RAA1F_ARATH 1 216 + 216 none 99.54 217 93.06 2e-149 Ras-related protein RABA1f OS Arabidopsis thaliana GN RABA1F PE 2 SV 1
blastp_uniprot_sprot sp|Q40521|RB11B_TOBAC 2 217 + 216 Gaps:1 99.08 217 91.16 2e-144 Ras-related protein Rab11B OS Nicotiana tabacum GN RAB11B PE 2 SV 1
blastp_uniprot_sprot sp|Q9LK99|RAA1G_ARATH 1 217 + 217 none 100.00 217 88.48 3e-143 Ras-related protein RABA1g OS Arabidopsis thaliana GN RABA1G PE 2 SV 1
blastp_uniprot_sprot sp|Q9S810|RAA1I_ARATH 1 216 + 216 Gaps:1 99.54 218 86.18 3e-138 Ras-related protein RABA1i OS Arabidopsis thaliana GN RABA1I PE 2 SV 1
blastp_uniprot_sprot sp|Q1PEX3|RAA1H_ARATH 1 217 + 217 Gaps:1 100.00 218 84.40 5e-136 Ras-related protein RABA1h OS Arabidopsis thaliana GN RABA1H PE 2 SV 1
blastp_uniprot_sprot sp|O49513|RAA1E_ARATH 1 216 + 216 none 99.54 217 82.41 3e-135 Ras-related protein RABA1e OS Arabidopsis thaliana GN RABA1E PE 2 SV 1
blastp_uniprot_sprot sp|Q9SN35|RAA1D_ARATH 1 216 + 216 Gaps:5 99.53 214 84.98 1e-129 Ras-related protein RABA1d OS Arabidopsis thaliana GN RABA1D PE 2 SV 1
blastp_uniprot_sprot sp|P40393|RIC2_ORYSJ 3 216 + 214 Gaps:3 98.16 217 83.57 5e-127 Ras-related protein RIC2 OS Oryza sativa subsp. japonica GN RIC2 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FK68|RAA1C_ARATH 1 216 + 216 Gaps:3 99.54 216 81.40 8e-126 Ras-related protein RABA1c OS Arabidopsis thaliana GN RABA1C PE 1 SV 1
blastp_uniprot_sprot sp|Q01111|YPT3_NICPL 1 217 + 217 Gaps:5 100.00 218 78.44 8e-124 Ras-related protein YPT3 OS Nicotiana plumbaginifolia GN YPT3 PE 2 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 6 215 210 PTHR24073 none none none
SMART 16 173 158 SM00174 "Reactome:REACT_11044" Rho (Ras homology) subfamily of Ras-like small GTPases IPR003578
PANTHER 6 215 210 PTHR24073:SF448 none none none
Pfam 15 175 161 PF00071 none Ras family IPR001806
TIGRFAM 12 170 159 TIGR00231 none small_GTP: small GTP-binding protein domain IPR005225
SMART 19 212 194 SM00176 none Ran (Ras-related nuclear proteins) /TC4 subfamily of small GTPases IPR002041
PRINTS 55 77 23 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 117 130 14 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 37 53 17 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 152 174 23 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 14 35 22 PR00449 none Transforming protein P21 ras signature IPR001806
SUPERFAMILY 9 181 173 SSF52540 none none IPR027417
SMART 14 177 164 SM00175 none Rab subfamily of small GTPases IPR003579
ProSiteProfiles 9 215 207 PS51419 none small GTPase Rab1 family profile. none
SMART 11 177 167 SM00173 none Ras subfamily of RAS small GTPases IPR020849
Gene3D 6 189 184 G3DSA:3.40.50.300 none none IPR027417

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4

0 Targeting