Protein : Qrob_P0409980.2 Q. robur
Protein Identifier  ? Qrob_P0409980.2 Organism . Name  Quercus robur
Score  48.0 Score Type  egn
Protein Description  (M=3) 2.4.1.1 - Glycogen phosphorylase. Code Enzyme  EC:2.4.1.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 191  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0008184 glycogen phosphorylase activity Catalysis of the reaction: glycogen + phosphate = maltodextrin + alpha-D-glucose 1-phosphate.
GO:0032040 small-subunit processome A large ribonucleoprotein complex that is an early preribosomal complex. In S. cerevisiae, it has a size of 80S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa000958mg 6 100 + 95 Gaps:2 9.79 950 89.25 2e-46 hypothetical protein
blastp_kegg lcl|pmum:103321498 18 100 + 83 none 8.74 950 96.39 4e-46 alpha-1 4 glucan phosphorylase L-2 isozyme chloroplastic/amyloplastic-like
blastp_kegg lcl|pop:POPTR_0010s16770g 18 100 + 83 none 8.71 953 96.39 6e-46 POPTRDRAFT_881100 hypothetical protein
blastp_kegg lcl|sot:102603391 7 100 + 94 none 9.65 974 84.04 3e-45 STP-1 alpha-1 4 glucan phosphorylase L-2 isozyme chloroplastic/amyloplastic-like (EC:2.4.1.1)
blastp_kegg lcl|sly:101248295 7 100 + 94 none 9.72 967 84.04 4e-45 alpha-1 4 glucan phosphorylase L-2 isozyme chloroplastic/amyloplastic-like
blastp_kegg lcl|pda:103697013 7 122 + 116 Gaps:2 11.39 1001 74.56 4e-45 alpha-1 4 glucan phosphorylase L isozyme chloroplastic/amyloplastic
blastp_kegg lcl|bdi:100846348 7 100 + 94 none 32.98 285 79.79 5e-45 alpha-1 4 glucan phosphorylase L-2 isozyme chloroplastic/amyloplastic-like
blastp_kegg lcl|mdm:103431906 18 100 + 83 none 8.72 952 93.98 5e-45 alpha-1 4 glucan phosphorylase L-2 isozyme chloroplastic/amyloplastic-like
blastp_kegg lcl|vvi:100245621 18 100 + 83 none 8.45 982 95.18 6e-45 alpha-1 4 glucan phosphorylase L isozyme chloroplastic/amyloplastic-like
blastp_kegg lcl|mdm:103425564 18 100 + 83 none 8.72 952 93.98 7e-45 alpha-1 4 glucan phosphorylase L-2 isozyme chloroplastic/amyloplastic-like
blastp_pdb 1ygp_B 18 98 + 81 none 9.22 879 67.90 5e-30 mol:protein length:879 YEAST GLYCOGEN PHOSPHORYLASE
blastp_pdb 1ygp_A 18 98 + 81 none 9.22 879 67.90 5e-30 mol:protein length:879 YEAST GLYCOGEN PHOSPHORYLASE
blastp_pdb 1qm5_B 7 140 + 134 Gaps:6 16.08 796 46.88 5e-27 mol:protein length:796 MALTODEXTRIN PHOSPHORYLASE
blastp_pdb 1qm5_A 7 140 + 134 Gaps:6 16.08 796 46.88 5e-27 mol:protein length:796 MALTODEXTRIN PHOSPHORYLASE
blastp_pdb 1e4o_B 7 140 + 134 Gaps:6 16.08 796 46.88 5e-27 mol:protein length:796 MALTODEXTRIN PHOSPHORYLASE
blastp_pdb 1e4o_A 7 140 + 134 Gaps:6 16.08 796 46.88 5e-27 mol:protein length:796 MALTODEXTRIN PHOSPHORYLASE
blastp_pdb 2azd_B 7 140 + 134 Gaps:6 16.08 796 46.88 6e-27 mol:protein length:796 Maltodextrin phosphorylase
blastp_pdb 2azd_A 7 140 + 134 Gaps:6 16.08 796 46.88 6e-27 mol:protein length:796 Maltodextrin phosphorylase
blastp_pdb 2aw3_B 7 140 + 134 Gaps:6 16.08 796 46.88 6e-27 mol:protein length:796 Maltodextrin phosphorylase
blastp_pdb 2aw3_A 7 140 + 134 Gaps:6 16.08 796 46.88 6e-27 mol:protein length:796 Maltodextrin phosphorylase
blastp_uniprot_sprot sp|P53535|PHSL2_SOLTU 7 100 + 94 none 9.65 974 84.04 1e-46 Alpha-1 4 glucan phosphorylase L-2 isozyme chloroplastic/amyloplastic OS Solanum tuberosum GN STP-1 PE 1 SV 1
blastp_uniprot_sprot sp|P04045|PHSL1_SOLTU 7 100 + 94 none 9.73 966 81.91 2e-45 Alpha-1 4 glucan phosphorylase L-1 isozyme chloroplastic/amyloplastic OS Solanum tuberosum PE 1 SV 2
blastp_uniprot_sprot sp|P53536|PHSL_VICFA 6 100 + 95 Gaps:2 9.27 1003 83.87 6e-44 Alpha-1 4 glucan phosphorylase L isozyme chloroplastic/amyloplastic OS Vicia faba GN PHO1 PE 1 SV 2
blastp_uniprot_sprot sp|P27598|PHSL_IPOBA 7 100 + 94 none 9.84 955 80.85 5e-43 Alpha-1 4 glucan phosphorylase L isozyme chloroplastic/amyloplastic OS Ipomoea batatas PE 2 SV 1
blastp_uniprot_sprot sp|Q9LKJ3|PHSH_WHEAT 18 100 + 83 none 9.98 832 83.13 4e-42 Alpha-glucan phosphorylase H isozyme OS Triticum aestivum PE 2 SV 1
blastp_uniprot_sprot sp|Q9LIB2|PHS1_ARATH 18 117 + 100 none 10.40 962 75.00 1e-41 Alpha-glucan phosphorylase 1 OS Arabidopsis thaliana GN PHS1 PE 1 SV 1
blastp_uniprot_sprot sp|P32811|PHSH_SOLTU 18 100 + 83 none 9.90 838 83.13 7e-41 Alpha-glucan phosphorylase H isozyme OS Solanum tuberosum PE 1 SV 1
blastp_uniprot_sprot sp|Q9SD76|PHS2_ARATH 18 100 + 83 none 9.87 841 81.93 5e-40 Alpha-glucan phosphorylase 2 cytosolic OS Arabidopsis thaliana GN PHS2 PE 2 SV 1
blastp_uniprot_sprot sp|P53537|PHSH_VICFA 18 117 + 100 none 11.88 842 73.00 1e-38 Alpha-glucan phosphorylase H isozyme OS Vicia faba PE 1 SV 1
blastp_uniprot_sprot sp|P45180|PHSG_HAEIN 18 124 + 107 Gaps:3 12.67 821 50.00 1e-28 Glycogen phosphorylase OS Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN glgP PE 3 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 18 113 96 PTHR11468:SF8 none none none
Coils 158 179 22 Coil none none none
PANTHER 18 113 96 PTHR11468 "KEGG:00500+2.4.1.1","MetaCyc:PWY-5941","MetaCyc:PWY-6731","MetaCyc:PWY-6737","MetaCyc:PWY-7238","Reactome:REACT_474";signature_desc=GLYCOGEN PHOSPHORYLASE none IPR000811
Gene3D 12 130 119 G3DSA:3.40.50.2000 none none none
Pfam 100 175 76 PF04147 none Nop14-like family IPR007276
ProSitePatterns 48 60 13 PS00102 "KEGG:00500+2.4.1.1","MetaCyc:PWY-5941","MetaCyc:PWY-6731","MetaCyc:PWY-6737","MetaCyc:PWY-7238","Reactome:REACT_474" Phosphorylase pyridoxal-phosphate attachment site. IPR000811
Pfam 9 117 109 PF00343 "KEGG:00500+2.4.1.1","MetaCyc:PWY-5941","MetaCyc:PWY-6731","MetaCyc:PWY-6737","MetaCyc:PWY-7238","Reactome:REACT_474" Carbohydrate phosphorylase IPR000811
SUPERFAMILY 5 137 133 SSF53756 none none none

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

0 Targeting