Protein : Qrob_P0409260.2 Q. robur
Protein Identifier  ? Qrob_P0409260.2 Organism . Name  Quercus robur
Score  88.0 Score Type  egn
Protein Description  (M=2) 6.1.1.15 - Proline--tRNA ligase. Code Enzyme  EC:6.1.1.15
Gene Prediction Quality  validated Protein length 

Sequence

Length: 510  
Kegg Orthology  K01881
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

7 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0004812 aminoacyl-tRNA ligase activity Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
GO:0006418 tRNA aminoacylation for protein translation The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
GO:0004827 proline-tRNA ligase activity Catalysis of the reaction: ATP + L-proline + tRNA(Pro) = AMP + diphosphate + L-prolyl-tRNA(Pro).
GO:0006433 prolyl-tRNA aminoacylation The process of coupling proline to prolyl-tRNA, catalyzed by prolyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100782067 1 509 + 509 Gaps:6 100.00 515 86.60 0.0 bifunctional glutamate/proline--tRNA ligase-like
blastp_kegg lcl|pvu:PHAVU_001G218300g 1 509 + 509 Gaps:1 100.00 510 86.86 0.0 hypothetical protein
blastp_kegg lcl|cmo:103494536 24 509 + 486 none 95.11 511 88.68 0.0 putative proline--tRNA ligase C19C7.06
blastp_kegg lcl|csv:101211125 24 509 + 486 none 95.11 511 88.27 0.0 bifunctional glutamate/proline--tRNA ligase-like
blastp_kegg lcl|pop:POPTR_0002s18810g 15 509 + 495 none 99.40 498 87.47 0.0 POPTRDRAFT_552617 tRNA synthetase-related family protein
blastp_kegg lcl|cmo:103503756 24 509 + 486 none 95.11 511 88.07 0.0 putative proline--tRNA ligase C19C7.06
blastp_kegg lcl|gmx:100816763 1 509 + 509 Gaps:6 100.00 515 84.66 0.0 bifunctional glutamate/proline--tRNA ligase-like
blastp_kegg lcl|sly:101260238 15 509 + 495 none 96.12 515 86.06 0.0 putative proline--tRNA ligase C19C7.06-like
blastp_kegg lcl|sot:102603089 15 509 + 495 none 96.12 515 86.06 0.0 putative proline--tRNA ligase C19C7.06-like
blastp_kegg lcl|cic:CICLE_v10019765mg 1 509 + 509 Gaps:2 100.00 511 86.89 0.0 hypothetical protein
blastp_pdb 1hc7_D 20 504 + 485 Gaps:14 99.16 477 43.76 2e-127 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_pdb 1hc7_C 20 504 + 485 Gaps:14 99.16 477 43.76 2e-127 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_pdb 1hc7_B 20 504 + 485 Gaps:14 99.16 477 43.76 2e-127 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_pdb 1hc7_A 20 504 + 485 Gaps:14 99.16 477 43.76 2e-127 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_pdb 1h4t_D 20 504 + 485 Gaps:14 99.16 477 43.76 2e-127 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_pdb 1h4t_C 20 504 + 485 Gaps:14 99.16 477 43.76 2e-127 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_pdb 1h4t_B 20 504 + 485 Gaps:14 99.16 477 43.76 2e-127 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_pdb 1h4t_A 20 504 + 485 Gaps:14 99.16 477 43.76 2e-127 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_pdb 1h4s_B 20 504 + 485 Gaps:14 99.16 477 43.76 2e-127 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_pdb 1h4s_A 20 504 + 485 Gaps:14 99.16 477 43.76 2e-127 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_uniprot_sprot sp|O60155|PRS1_SCHPO 6 509 + 504 Gaps:32 74.30 716 54.51 0.0 Putative proline--tRNA ligase C19C7.06 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN prs1 PE 3 SV 1
blastp_uniprot_sprot sp|Q8I5R7|SYP_PLAF7 26 509 + 484 Gaps:11 66.35 746 54.14 0.0 Proline--tRNA ligase OS Plasmodium falciparum (isolate 3D7) GN proRS PE 1 SV 1
blastp_uniprot_sprot sp|P07814|SYEP_HUMAN 21 509 + 489 Gaps:19 33.33 1512 56.15 0.0 Bifunctional glutamate/proline--tRNA ligase OS Homo sapiens GN EPRS PE 1 SV 5
blastp_uniprot_sprot sp|Q8CGC7|SYEP_MOUSE 21 509 + 489 Gaps:17 33.33 1512 56.55 0.0 Bifunctional glutamate/proline--tRNA ligase OS Mus musculus GN Eprs PE 1 SV 4
blastp_uniprot_sprot sp|P38708|YHI0_YEAST 26 509 + 484 Gaps:22 73.26 688 53.37 0.0 Putative proline--tRNA ligase YHR020W OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN YHR020W PE 1 SV 1
blastp_uniprot_sprot sp|P28668|SYEP_DROME 9 509 + 501 Gaps:23 29.87 1714 55.66 0.0 Bifunctional glutamate/proline--tRNA ligase OS Drosophila melanogaster GN Aats-glupro PE 1 SV 2
blastp_uniprot_sprot sp|Q8SSD7|SYP_ENCCU 26 509 + 484 Gaps:16 99.00 501 48.39 7e-180 Proline--tRNA ligase OS Encephalitozoon cuniculi (strain GB-M1) GN ECU02_1360 PE 1 SV 2
blastp_uniprot_sprot sp|A0Q2I3|SYP_CLONN 21 509 + 489 Gaps:15 99.58 478 44.75 3e-145 Proline--tRNA ligase OS Clostridium novyi (strain NT) GN proS PE 3 SV 1
blastp_uniprot_sprot sp|B3EE36|SYP_CHLL2 29 509 + 481 Gaps:6 99.17 481 44.44 2e-143 Proline--tRNA ligase OS Chlorobium limicola (strain DSM 245 / NBRC 103803) GN proS PE 3 SV 1
blastp_uniprot_sprot sp|Q9L4Q8|SYP_CLOSD 29 509 + 481 Gaps:23 97.71 481 45.11 1e-142 Proline--tRNA ligase OS Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) GN proS PE 1 SV 1

20 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
TIGRFAM 31 509 479 TIGR00408 "KEGG:00970+6.1.1.15" proS_fam_I: proline--tRNA ligase IPR004499
SUPERFAMILY 431 509 79 SSF64586 "KEGG:00970+6.1.1.15" none IPR017449
Pfam 70 215 146 PF00587 "Reactome:REACT_71" tRNA synthetase class II core domain (G, H, P, S and T) IPR002314
Hamap 29 509 481 MF_01571 "KEGG:00970+6.1.1.15" Proline--tRNA ligase [proS]. IPR004499
ProSiteProfiles 68 306 239 PS50862 "Reactome:REACT_71" Aminoacyl-transfer RNA synthetases class-II family profile. IPR006195
PANTHER 27 452 426 PTHR11451:SF21 none none none
ProSitePatterns 474 492 19 PS00128 none Alpha-lactalbumin / lysozyme C signature. IPR019799
Gene3D 307 427 121 G3DSA:3.40.50.800 none none IPR004154
SUPERFAMILY 34 300 267 SSF55681 none none none
SUPERFAMILY 302 427 126 SSF52954 none none IPR004154
Pfam 436 509 74 PF09180 "KEGG:00970+6.1.1.15" Prolyl-tRNA synthetase, C-terminal IPR016061
Pfam 313 409 97 PF03129 none Anticodon binding domain IPR004154
PANTHER 27 452 426 PTHR11451 none none none
PRINTS 87 105 19 PR01046 "KEGG:00970+6.1.1.15" Prolyl-tRNA synthetase signature IPR002316
PRINTS 158 166 9 PR01046 "KEGG:00970+6.1.1.15" Prolyl-tRNA synthetase signature IPR002316
PRINTS 168 179 12 PR01046 "KEGG:00970+6.1.1.15" Prolyl-tRNA synthetase signature IPR002316
PRINTS 128 139 12 PR01046 "KEGG:00970+6.1.1.15" Prolyl-tRNA synthetase signature IPR002316
SMART 436 509 74 SM00946 "KEGG:00970+6.1.1.15" Prolyl-tRNA synthetase, C-terminal IPR016061
Gene3D 430 508 79 G3DSA:3.30.110.30 "KEGG:00970+6.1.1.15" none IPR016061
Gene3D 28 306 279 G3DSA:3.30.930.10 none none none

0 Localization

14 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran_2000_2002_QTL1_Delta.F Qrob_Chr11 11 v_AC14YL05_1355 s_2F1WOG_696 10.96 3,25 16,39 lod 25.0121 0.2
Bourran_2000_2002_QTL5_Delta.F Qrob_Chr11 11 s_1BD29X_620 s_2F1WOG_696 2.94 1,08 16,39 lod 5.936 0.05
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18

0 Targeting