Protein : Qrob_P0403110.2 Q. robur
Protein Identifier  ? Qrob_P0403110.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=82) PF00190 - Cupin Gene Prediction Quality  validated
Protein length 

Sequence

Length: 221  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0045735 nutrient reservoir activity Functions in the storage of nutritious substrates.
GO:0030145 manganese ion binding Interacting selectively and non-covalently with manganese (Mn) ions.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100258041 1 220 + 220 none 99.55 221 74.09 8e-115 germin-like protein subfamily 1 member 17
blastp_kegg lcl|vvi:100240807 1 220 + 220 none 100.00 220 73.64 3e-112 germin-like protein subfamily 1 member 7
blastp_kegg lcl|vvi:100246011 1 220 + 220 none 100.00 220 72.73 6e-112 germin-like protein subfamily 1 member 13
blastp_kegg lcl|vvi:100261406 1 220 + 220 none 100.00 220 72.27 2e-111 germin-like protein subfamily 1 member 14
blastp_kegg lcl|vvi:100261451 1 220 + 220 none 100.00 220 73.18 3e-111 germin-like protein subfamily 1 member 7-like
blastp_kegg lcl|vvi:100251155 1 220 + 220 none 100.00 220 72.27 4e-111 germin-like protein subfamily 1 member 14
blastp_kegg lcl|vvi:100256308 1 220 + 220 none 100.00 220 72.27 1e-110 germin-like protein subfamily 1 member 14
blastp_kegg lcl|vvi:100266609 1 220 + 220 none 100.00 220 71.36 2e-110 germin-like protein subfamily 1 member 14
blastp_kegg lcl|vvi:100233016 1 219 + 219 none 99.55 220 71.69 5e-110 GER4 germin-like protein 4
blastp_kegg lcl|vvi:100242546 1 220 + 220 none 97.78 225 72.73 8e-110 germin-like protein subfamily 1 member 13-like
blastp_pdb 2et7_A 25 220 + 196 Gaps:4 97.51 201 50.00 6e-57 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2ete_B 25 220 + 196 Gaps:4 97.51 201 49.49 7e-56 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2ete_A 25 220 + 196 Gaps:4 97.51 201 49.49 7e-56 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2et1_A 25 220 + 196 Gaps:4 97.51 201 49.49 7e-56 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 1fi2_A 25 220 + 196 Gaps:4 97.51 201 49.49 7e-56 mol:protein length:201 OXALATE OXIDASE
blastp_uniprot_sprot sp|Q9SFF9|GL17_ARATH 13 220 + 208 Gaps:2 90.83 229 68.27 1e-94 Germin-like protein subfamily 1 member 7 OS Arabidopsis thaliana GN At3g05950 PE 2 SV 1
blastp_uniprot_sprot sp|P92997|GL113_ARATH 3 220 + 218 Gaps:1 98.65 222 63.47 4e-94 Germin-like protein subfamily 1 member 13 OS Arabidopsis thaliana GN GLP6 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FID0|GL114_ARATH 8 220 + 213 Gaps:1 96.40 222 64.95 6e-94 Germin-like protein subfamily 1 member 14 OS Arabidopsis thaliana GN At5g39110 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FIC6|GL117_ARATH 3 220 + 218 Gaps:2 98.64 221 63.76 3e-92 Germin-like protein subfamily 1 member 17 OS Arabidopsis thaliana GN At5g39150 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIC8|GL116_ARATH 3 220 + 218 Gaps:2 98.20 222 61.93 4e-92 Germin-like protein subfamily 1 member 16 OS Arabidopsis thaliana GN At5g39130 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIC9|GL115_ARATH 3 220 + 218 Gaps:2 98.64 221 63.30 6e-92 Germin-like protein subfamily 1 member 15 OS Arabidopsis thaliana GN At5g39120 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL89|GL119_ARATH 3 220 + 218 Gaps:2 98.64 221 63.76 7e-92 Germin-like protein subfamily 1 member 19 OS Arabidopsis thaliana GN At5g39180 PE 2 SV 1
blastp_uniprot_sprot sp|P92996|GL120_ARATH 3 220 + 218 Gaps:2 98.20 222 61.47 3e-91 Germin-like protein subfamily 1 member 20 OS Arabidopsis thaliana GN GLP5A PE 1 SV 1
blastp_uniprot_sprot sp|P92999|GL118_ARATH 3 220 + 218 Gaps:2 98.20 222 61.47 3e-91 Germin-like protein subfamily 1 member 18 OS Arabidopsis thaliana GN GLP2A PE 2 SV 2
blastp_uniprot_sprot sp|Q6K5Q0|GL21_ORYSJ 6 220 + 215 Gaps:2 98.61 216 63.85 6e-90 Putative germin-like protein 2-1 OS Oryza sativa subsp. japonica GN Os02g0491600 PE 3 SV 1
rpsblast_cdd gnl|CDD|201069 65 214 + 150 Gaps:14 99.28 139 36.23 2e-30 pfam00190 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
rpsblast_cdd gnl|CDD|197904 72 213 + 142 Gaps:3 95.21 146 40.29 1e-28 smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 8 220 213 PTHR31238:SF1 none none none
ProSitePatterns 107 120 14 PS00725 none Germin family signature. IPR019780
SMART 64 214 151 SM00835 none Cupin IPR006045
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 8 220 213 PTHR31238 none none none
SUPERFAMILY 60 219 160 SSF51182 none none IPR011051
Phobius 4 15 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 24 220 197 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 67 213 147 PF00190 none Cupin IPR006045
PRINTS 144 164 21 PR00325 none Germin signature IPR001929
PRINTS 177 192 16 PR00325 none Germin signature IPR001929
PRINTS 112 132 21 PR00325 none Germin signature IPR001929
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 16 23 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Gene3D 25 219 195 G3DSA:2.60.120.10 none none IPR014710

3 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 23 22
SignalP_GRAM_NEGATIVE 1 23 22
SignalP_EUK 1 23 22

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran_2000_2002_QTL5_Delta.F Qrob_Chr11 11 s_1BD29X_620 s_2F1WOG_696 2.94 1,08 16,39 lod 5.936 0.05
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL5_d13Cf Qrob_Chr11 11 s_1BD29X_620 s_1A5BYY_1671 2.26 1,08 11,24 lod 5.8451 0.037

0 Targeting