Protein : Qrob_P0401700.2 Q. robur
Protein Identifier  ? Qrob_P0401700.2 Organism . Name  Quercus robur
Score  7.3 Score Type  egn
Protein Description  (M=1) PF09446 - VMA21-like domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 76  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly The aggregation, arrangement and bonding together of a vacuolar proton-transporting V-type ATPase complex, proton-transporting two-sector ATPase complex that couples ATP hydrolysis to the transport of protons across the vacuolar membrane.

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101295033 1 65 + 65 Gaps:1 60.95 105 78.12 3e-27 uncharacterized protein LOC101295033
blastp_kegg lcl|cic:CICLE_v10017270mg 2 75 + 74 Gaps:11 60.00 105 84.13 1e-26 hypothetical protein
blastp_kegg lcl|cit:102629235 2 75 + 74 Gaps:11 60.00 105 84.13 1e-26 hypothetical protein
blastp_kegg lcl|fve:101310395 1 53 + 53 none 50.48 105 84.91 4e-26 uncharacterized protein LOC101310395
blastp_kegg lcl|cam:101506839 1 75 + 75 Gaps:11 61.54 104 76.56 7e-26 uncharacterized LOC101506839
blastp_kegg lcl|pper:PRUPE_ppa013759mg 1 54 + 54 none 51.43 105 85.19 8e-26 hypothetical protein
blastp_kegg lcl|pop:POPTR_0001s16060g 1 75 + 75 Gaps:11 60.95 105 78.12 6e-25 hypothetical protein
blastp_kegg lcl|pmum:103325501 1 54 + 54 none 51.43 105 83.33 9e-25 uncharacterized LOC103325501
blastp_kegg lcl|pvu:PHAVU_004G017800g 1 56 + 56 none 53.85 104 78.57 2e-24 hypothetical protein
blastp_kegg lcl|vvi:100256132 2 75 + 74 Gaps:10 60.38 106 76.56 5e-24 uncharacterized LOC100256132

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 24 75 52 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 6 23 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 5 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 2 25 24 PF09446 none VMA21-like domain IPR019013

1 Localization

Analysis Start End Length
TMHMM 2 24 22

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran1_2003_QTL6_peak_Bud_burst_A4 Qrob_Chr11 11 v_12066_307 s_1A9FKZ_348 3,59 0 20,89 lod 3,4 9,4
PM_1999_QTL17_peak_Bud_burst_3P Qrob_Chr11 11 s_1A9FKZ_348 v_11486_883 4,8 0 24,8 lod 3,5 6,2
Bourran2_2014_vEpiBC*_3P Qrob_Chr11 11 s_1A5GRX_415 v_4456_500 9,37 0 19,27 lod 3,513 9,3
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf Qrob_Chr11 11 s_1A9FKZ_348 v_7268_36 13.33 3,98 19,87 lod 29.1377 0.18

0 Targeting