Protein : Qrob_P0396620.2 Q. robur
Protein Identifier  ? Qrob_P0396620.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K12402 - AP-4 complex subunit mu-1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 208  
Kegg Orthology  K12402
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO:0016192 vesicle-mediated transport A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.
GO:0030131 clathrin adaptor complex A membrane coat adaptor complex that links clathrin to a membrane.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102624963 1 198 + 198 Gaps:3 44.57 451 89.05 5e-123 AP-4 complex subunit mu-like
blastp_kegg lcl|cic:CICLE_v10001124mg 1 198 + 198 Gaps:3 44.57 451 88.56 3e-122 hypothetical protein
blastp_kegg lcl|tcc:TCM_034244 1 198 + 198 Gaps:3 44.57 451 88.56 3e-122 Clathrin adaptor complexes medium subunit family protein isoform 1
blastp_kegg lcl|pop:POPTR_0002s10530g 1 198 + 198 Gaps:3 45.07 446 88.06 4e-122 POPTRDRAFT_816388 clathrin adaptor complexes medium subunit family protein
blastp_kegg lcl|ath:AT4G24550 1 198 + 198 Gaps:3 52.21 385 86.57 5e-120 clathrin adaptor complexes medium subunit family protein
blastp_kegg lcl|brp:103862264 1 198 + 198 Gaps:3 44.57 451 86.57 7e-120 AP-4 complex subunit mu
blastp_kegg lcl|fve:101293589 1 198 + 198 Gaps:3 44.57 451 86.07 2e-119 AP-4 complex subunit mu-1-like
blastp_kegg lcl|vvi:100254067 1 198 + 198 Gaps:3 44.57 451 87.06 2e-119 AP-4 complex subunit mu-1-like
blastp_kegg lcl|crb:CARUB_v10004794mg 1 198 + 198 Gaps:3 44.57 451 86.57 2e-119 hypothetical protein
blastp_kegg lcl|pxb:103964959 1 198 + 198 Gaps:3 44.57 451 85.57 4e-119 AP-4 complex subunit mu
blastp_pdb 1w63_V 3 198 + 196 Gaps:13 43.26 423 33.88 5e-27 mol:protein length:423 ADAPTOR-RELATED PROTEIN COMPLEX 1 MU 1 SUBUN
blastp_pdb 1w63_R 3 198 + 196 Gaps:13 43.26 423 33.88 5e-27 mol:protein length:423 ADAPTOR-RELATED PROTEIN COMPLEX 1 MU 1 SUBUN
blastp_pdb 1w63_P 3 198 + 196 Gaps:13 43.26 423 33.88 5e-27 mol:protein length:423 ADAPTOR-RELATED PROTEIN COMPLEX 1 MU 1 SUBUN
blastp_pdb 1w63_O 3 198 + 196 Gaps:13 43.26 423 33.88 5e-27 mol:protein length:423 ADAPTOR-RELATED PROTEIN COMPLEX 1 MU 1 SUBUN
blastp_pdb 1w63_N 3 198 + 196 Gaps:13 43.26 423 33.88 5e-27 mol:protein length:423 ADAPTOR-RELATED PROTEIN COMPLEX 1 MU 1 SUBUN
blastp_pdb 1w63_M 3 198 + 196 Gaps:13 43.26 423 33.88 5e-27 mol:protein length:423 ADAPTOR-RELATED PROTEIN COMPLEX 1 MU 1 SUBUN
blastp_pdb 2xa7_M 1 196 + 196 Gaps:30 41.70 446 33.33 3e-26 mol:protein length:446 AP-2 COMPLEX SUBUNIT MU
blastp_pdb 2vgl_M 1 196 + 196 Gaps:30 42.76 435 33.33 3e-26 mol:protein length:435 AP-2 COMPLEX SUBUNIT MU-1
blastp_pdb 2jkt_U 1 196 + 196 Gaps:30 42.76 435 33.33 3e-26 mol:protein length:435 AP-2 COMPLEX SUBUNIT MU-1
blastp_pdb 2jkt_M 1 196 + 196 Gaps:30 42.76 435 33.33 3e-26 mol:protein length:435 AP-2 COMPLEX SUBUNIT MU-1
blastp_uniprot_sprot sp|Q9SB50|AP4M_ARATH 1 198 + 198 Gaps:3 44.57 451 86.57 2e-120 AP-4 complex subunit mu OS Arabidopsis thaliana GN AP4M PE 1 SV 1
blastp_uniprot_sprot sp|O00189|AP4M1_HUMAN 1 198 + 198 Gaps:10 44.59 453 40.10 6e-43 AP-4 complex subunit mu-1 OS Homo sapiens GN AP4M1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9GPF0|AP4M_DICDI 1 161 + 161 Gaps:7 30.19 530 46.25 1e-42 AP-4 complex subunit mu OS Dictyostelium discoideum GN apm4 PE 2 SV 1
blastp_uniprot_sprot sp|Q29RY8|AP4M1_BOVIN 1 198 + 198 Gaps:10 44.69 452 39.60 2e-42 AP-4 complex subunit mu-1 OS Bos taurus GN AP4M1 PE 2 SV 1
blastp_uniprot_sprot sp|Q2PWT8|AP4M1_RAT 1 198 + 198 Gaps:10 44.59 453 39.60 4e-41 AP-4 complex subunit mu-1 OS Rattus norvegicus GN Ap4m1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9JKC7|AP4M1_MOUSE 1 198 + 198 Gaps:10 44.99 449 40.10 4e-41 AP-4 complex subunit mu-1 OS Mus musculus GN Ap4m1 PE 2 SV 1
blastp_uniprot_sprot sp|P35603|AP2M_CAEEL 1 193 + 193 Gaps:26 42.40 441 35.29 3e-28 AP-2 complex subunit mu OS Caenorhabditis elegans GN dpy-23 PE 2 SV 2
blastp_uniprot_sprot sp|Q32Q06|AP1M1_RAT 3 198 + 196 Gaps:13 43.26 423 34.43 4e-27 AP-1 complex subunit mu-1 OS Rattus norvegicus GN Ap1m1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9SAC9|AP1M1_ARATH 3 207 + 205 Gaps:18 45.56 428 37.44 4e-27 AP-1 complex subunit mu-1 OS Arabidopsis thaliana GN AP1M1 PE 3 SV 1
blastp_uniprot_sprot sp|P35585|AP1M1_MOUSE 3 198 + 196 Gaps:13 43.26 423 34.43 5e-27 AP-1 complex subunit mu-1 OS Mus musculus GN Ap1m1 PE 1 SV 3

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 1 132 132 PF01217 none Clathrin adaptor complex small chain IPR022775
SUPERFAMILY 1 141 141 SSF64356 none none IPR011012
PANTHER 1 198 198 PTHR11998:SF13 none none none
Gene3D 1 140 140 G3DSA:3.30.450.60 none none none
PRINTS 171 199 29 PR00314 none Clathrin coat assembly protein signature IPR001392
PRINTS 101 128 28 PR00314 none Clathrin coat assembly protein signature IPR001392
PRINTS 12 32 21 PR00314 none Clathrin coat assembly protein signature IPR001392
PANTHER 1 198 198 PTHR11998 none none none

0 Localization

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2003_QTL13_peak_Bud_burst_A4 Qrob_Chr09 9 s_1AP8MN_635 s_1A3QQ_692 18,18 10,88 25,88 lod 3,4 7,2
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran2_2002_QTL12_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 4,33 33,33 lod 6,5 9,1

0 Targeting