Protein : Qrob_P0396520.2 Q. robur
Protein Identifier  ? Qrob_P0396520.2 Organism . Name  Quercus robur
Score  95.1 Score Type  egn
Protein Description  (M=1) K06678 - condensin complex subunit 3 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 804  
Kegg Orthology  K06678
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0007076 mitotic chromosome condensation The cell cycle process in which chromatin structure is compacted prior to and during mitosis in eukaryotic cells.
GO:0000796 condensin complex A multisubunit protein complex that plays a central role in chromosome condensation.

11 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0004s08390g 9 801 + 793 Gaps:64 77.16 1051 69.54 0.0 POPTRDRAFT_714193 hypothetical protein
blastp_kegg lcl|vvi:100242435 1 803 + 803 Gaps:43 77.41 1036 70.95 0.0 condensin complex subunit 3-like
blastp_kegg lcl|cit:102626025 6 774 + 769 Gaps:49 74.64 1033 71.60 0.0 condensin complex subunit 3-like
blastp_kegg lcl|cic:CICLE_v10010965mg 6 774 + 769 Gaps:48 75.61 1033 70.42 0.0 hypothetical protein
blastp_kegg lcl|pmum:103327395 1 802 + 802 Gaps:51 77.59 1031 71.50 0.0 condensin complex subunit 3
blastp_kegg lcl|pper:PRUPE_ppa000695mg 1 802 + 802 Gaps:51 77.52 1032 70.75 0.0 hypothetical protein
blastp_kegg lcl|mdm:103406008 112 779 + 668 Gaps:45 67.25 974 71.15 0.0 condensin complex subunit 3-like
blastp_kegg lcl|tcc:TCM_017483 1 803 + 803 Gaps:58 76.91 1035 69.97 0.0 ARM repeat superfamily protein isoform 1
blastp_kegg lcl|fve:101309299 6 772 + 767 Gaps:53 74.71 1036 68.22 0.0 condensin complex subunit 3-like
blastp_kegg lcl|mdm:103444368 112 800 + 689 Gaps:46 74.26 909 70.52 0.0 uncharacterized LOC103444368
rpsblast_cdd gnl|CDD|205040 278 618 + 341 Gaps:60 98.34 302 27.27 9e-40 pfam12719 Cnd3 Nuclear condensing complex subunits C-term domain. The Cnd1-3 proteins are the three non-SMC (structural maintenance of chromosomes) proteins that go to make up the mitotic condensation complex along with the two SMC protein families XCAP-C and XCAP-E (or in the case of fission yeast Cut3 and Cut14). The five-member complex seems to be conserved from yeasts to vertebrates. This domain is the C-terminal cysteine-rich domain of Cnd3. The complex shuttles between the nucleus during mitosis and the cytoplasm during the rest of the cycle. Thus this family is made up of the C-termini of XCAP-Gs Ycg1 and Ycs5 members.

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 638 659 22 Coil none none none
Coils 1 40 40 Coil none none none
PANTHER 136 803 668 PTHR14418 none none IPR027165
SUPERFAMILY 558 578 21 SSF48371 none none IPR016024
SUPERFAMILY 181 211 31 SSF48371 none none IPR016024
SUPERFAMILY 305 502 198 SSF48371 none none IPR016024
Phobius 1 598 598 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 279 617 339 PF12719 none Nuclear condensing complex subunits, C-term domain IPR025977
Phobius 599 616 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 617 803 187 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

0 Localization

0 Qtllist

0 Targeting