Protein : Qrob_P0393360.2 Q. robur
Protein Identifier  ? Qrob_P0393360.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=14) K03549 - KUP system potassium uptake protein Gene Prediction Quality  validated
Protein length 

Sequence

Length: 483  
Kegg Orthology  K03549
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0015079 potassium ion transmembrane transporter activity Enables the transfer of potassium ions (K+) from one side of a membrane to the other.
GO:0071805 potassium ion transmembrane transport A process in which a potassium ion is transported from one side of a membrane to the other.

28 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0618610 1 482 + 482 Gaps:77 70.13 780 56.49 0.0 Potassium transporter putative
blastp_kegg lcl|cic:CICLE_v10018938mg 3 482 + 480 Gaps:79 70.31 778 55.76 0.0 hypothetical protein
blastp_kegg lcl|cit:102613864 3 482 + 480 Gaps:79 70.31 778 55.76 0.0 potassium transporter 5-like
blastp_kegg lcl|pmum:103333887 3 482 + 480 Gaps:80 69.97 786 56.00 0.0 potassium transporter 5-like
blastp_kegg lcl|mdm:103430201 3 482 + 480 Gaps:81 69.46 799 55.32 0.0 potassium transporter 5-like
blastp_kegg lcl|pper:PRUPE_ppa001648mg 3 482 + 480 Gaps:80 69.97 786 55.45 0.0 hypothetical protein
blastp_kegg lcl|mdm:103423150 13 482 + 470 Gaps:81 100.00 545 55.05 0.0 potassium transporter 5-like
blastp_kegg lcl|mdm:103413425 3 482 + 480 Gaps:81 96.19 577 54.59 0.0 potassium transporter 5-like
blastp_kegg lcl|mtr:MTR_7g108480 3 482 + 480 Gaps:85 69.21 773 56.82 0.0 Potassium transporter
blastp_kegg lcl|tcc:TCM_004579 3 482 + 480 Gaps:74 70.00 780 55.49 0.0 Potassium transporter putative
blastp_uniprot_sprot sp|Q5JK32|HAK5_ORYSJ 10 480 + 471 Gaps:85 69.14 781 40.93 1e-126 Potassium transporter 5 OS Oryza sativa subsp. japonica GN HAK5 PE 2 SV 2
blastp_uniprot_sprot sp|Q6H4M2|HAK19_ORYSJ 3 480 + 478 Gaps:95 70.75 742 38.10 1e-117 Potassium transporter 19 OS Oryza sativa subsp. japonica GN HAK19 PE 2 SV 1
blastp_uniprot_sprot sp|Q6H4L9|HAK20_ORYSJ 3 480 + 478 Gaps:85 70.82 747 38.56 2e-116 Potassium transporter 20 OS Oryza sativa subsp. japonica GN HAK20 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M7K4|POT5_ARATH 3 482 + 480 Gaps:96 71.34 785 38.21 5e-115 Potassium transporter 5 OS Arabidopsis thaliana GN POT5 PE 1 SV 1
blastp_uniprot_sprot sp|Q84MS3|HAK16_ORYSJ 3 480 + 478 Gaps:120 70.78 811 33.80 1e-102 Probable potassium transporter 16 OS Oryza sativa subsp. japonica GN HAK16 PE 2 SV 1
blastp_uniprot_sprot sp|Q84MS4|HAK27_ORYSJ 3 480 + 478 Gaps:108 71.02 811 34.90 2e-102 Potassium transporter 27 OS Oryza sativa subsp. japonica GN HAK27 PE 2 SV 1
blastp_uniprot_sprot sp|Q75G84|HAK21_ORYSJ 3 480 + 478 Gaps:103 71.46 799 35.73 6e-101 Potassium transporter 21 OS Oryza sativa subsp. japonica GN HAK21 PE 3 SV 1
blastp_uniprot_sprot sp|Q69L87|HAK22_ORYSJ 3 480 + 478 Gaps:105 68.99 790 35.41 1e-96 Potassium transporter 22 OS Oryza sativa subsp. japonica GN HAK22 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VXB1|HAK12_ORYSJ 8 480 + 473 Gaps:108 71.75 793 32.16 1e-93 Putative potassium transporter 12 OS Oryza sativa subsp. japonica GN HAK12 PE 2 SV 1
blastp_uniprot_sprot sp|Q6VVA6|HAK1_ORYSJ 3 480 + 478 Gaps:111 71.54 801 34.90 9e-92 Potassium transporter 1 OS Oryza sativa subsp. japonica GN HAK1 PE 1 SV 2
rpsblast_cdd gnl|CDD|165718 1 480 + 480 Gaps:97 72.53 779 34.69 1e-102 PLN00150 PLN00150 potassium ion transporter family protein Provisional.
rpsblast_cdd gnl|CDD|129876 3 480 + 478 Gaps:94 75.29 688 29.92 3e-96 TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli a partially sequenced ORF from Lactococcus lactis high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus Neurospora crassa and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter and uptake is blocked by protonophores such as CCCP (but not arsenate) the energy coupling mechanism has not been defined. However the N. crassa protein has been shown to be a K+:H+ symporter establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
rpsblast_cdd gnl|CDD|177754 3 481 + 479 Gaps:112 67.72 852 31.54 5e-91 PLN00151 PLN00151 potassium transporter Provisional.
rpsblast_cdd gnl|CDD|177752 3 480 + 478 Gaps:120 74.65 785 30.89 3e-88 PLN00148 PLN00148 potassium transporter Provisional.
rpsblast_cdd gnl|CDD|202355 2 343 + 342 Gaps:106 75.28 534 27.36 3e-80 pfam02705 K_trans K+ potassium transporter. This is a family of K+ potassium transporters that are conserved across phyla having both bacterial (KUP) yeast (HAK) and plant (AtKT) sequences as members.
rpsblast_cdd gnl|CDD|177753 5 480 + 476 Gaps:107 74.07 779 30.33 1e-79 PLN00149 PLN00149 potassium transporter Provisional.
rpsblast_cdd gnl|CDD|32972 2 328 + 327 Gaps:61 59.97 627 26.86 7e-45 COG3158 Kup K+ transporter [Inorganic ion transport and metabolism].
rpsblast_cdd gnl|CDD|182693 3 322 + 320 Gaps:83 59.32 622 26.83 2e-33 PRK10745 trkD potassium transport protein Kup Provisional.

23 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 2 145 144 PF02705 none K+ potassium transporter IPR003855
Pfam 147 328 182 PF02705 none K+ potassium transporter IPR003855
Phobius 101 105 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 18 18 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 224 228 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 75 100 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 15 18 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 167 177 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 148 166 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 229 250 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 49 74 26 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 199 204 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 205 223 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 106 128 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 178 198 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 3 14 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 28 48 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 3 482 480 PTHR30540:SF2 none none none
Phobius 251 482 232 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 3 482 480 PTHR30540 none none none
Phobius 19 27 9 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 129 147 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

9 Localization

Analysis Start End Length
TMHMM 178 200 22
TMHMM 106 128 22
TMHMM 149 168 19
TMHMM 74 96 22
TMHMM 232 254 22
TMHMM 2 21 19
TMHMM 26 48 22
TMHMM 205 222 17
SignalP_EUK 1 18 17

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7

0 Targeting