Protein : Qrob_P0391130.2 Q. robur
Protein Identifier  ? Qrob_P0391130.2 Organism . Name  Quercus robur
Score  93.6 Score Type  egn
Protein Description  (M=2) K12183 - ESCRT-I complex subunit TSG101 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 403  
Kegg Orthology  K12183
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0015031 protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0006464 cellular protein modification process The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103488816 4 392 + 389 Gaps:22 95.50 422 72.70 0.0 protein ELC-like
blastp_kegg lcl|csv:101209957 4 392 + 389 Gaps:22 95.50 422 71.71 0.0 protein ELC-like
blastp_kegg lcl|mdm:103438626 4 390 + 387 Gaps:22 95.70 419 71.57 0.0 protein ELC-like
blastp_kegg lcl|pper:PRUPE_ppa006263mg 4 390 + 387 Gaps:21 95.71 420 71.14 0.0 hypothetical protein
blastp_kegg lcl|pmum:103330766 4 390 + 387 Gaps:21 95.71 420 70.90 0.0 protein ELC-like
blastp_kegg lcl|pxb:103946180 4 390 + 387 Gaps:22 95.70 419 68.83 0.0 protein ELC-like
blastp_kegg lcl|mdm:103407321 4 390 + 387 Gaps:22 95.70 419 68.08 0.0 protein ELC-like
blastp_kegg lcl|fve:101309720 6 390 + 385 Gaps:14 96.29 404 69.67 0.0 protein ELC-like
blastp_kegg lcl|tcc:TCM_044692 6 391 + 386 Gaps:15 95.60 409 71.36 0.0 Ubiquitin-conjugating enzyme/RWD-like protein
blastp_kegg lcl|cic:CICLE_v10001331mg 6 391 + 386 Gaps:25 95.60 409 70.84 0.0 hypothetical protein
blastp_pdb 2f0r_B 28 153 + 126 Gaps:1 78.62 159 38.40 4e-24 mol:protein length:159 Tumor susceptibility gene 101 protein
blastp_pdb 2f0r_A 28 153 + 126 Gaps:1 78.62 159 38.40 4e-24 mol:protein length:159 Tumor susceptibility gene 101 protein
blastp_pdb 1s1q_C 28 153 + 126 Gaps:1 86.21 145 38.40 4e-24 mol:protein length:145 Tumor susceptibility gene 101 protein
blastp_pdb 1s1q_A 28 153 + 126 Gaps:1 86.21 145 38.40 4e-24 mol:protein length:145 Tumor susceptibility gene 101 protein
blastp_pdb 1m4q_A 28 153 + 126 Gaps:1 86.21 145 38.40 4e-24 mol:protein length:145 Tumor Susceptibility gene 101 protein
blastp_pdb 1m4p_A 28 153 + 126 Gaps:1 86.21 145 38.40 4e-24 mol:protein length:145 Tumor Susceptibility gene 101 protein
blastp_pdb 1kpq_A 28 153 + 126 Gaps:1 86.21 145 38.40 4e-24 mol:protein length:145 Tumor susceptibility gene 101 protein
blastp_pdb 1kpp_A 28 153 + 126 Gaps:1 86.21 145 38.40 4e-24 mol:protein length:145 Tumor susceptibility gene 101 protein
blastp_pdb 3p9h_A 28 153 + 126 Gaps:5 83.45 145 38.02 2e-20 mol:protein length:145 Tumor susceptibility gene 101 protein
blastp_pdb 3p9g_A 28 153 + 126 Gaps:5 83.45 145 38.02 2e-20 mol:protein length:145 Tumor susceptibility gene 101 protein
blastp_uniprot_sprot sp|Q9LHG8|ELC_ARATH 2 387 + 386 Gaps:13 97.24 398 63.05 6e-166 Protein ELC OS Arabidopsis thaliana GN ELC PE 1 SV 1
blastp_uniprot_sprot sp|Q9FFY6|ELCL_ARATH 2 387 + 386 Gaps:29 97.01 368 66.95 3e-161 Protein ELC-like OS Arabidopsis thaliana GN ELCL PE 1 SV 1
blastp_uniprot_sprot sp|Q61187|TS101_MOUSE 28 372 + 345 Gaps:30 92.84 391 30.30 4e-45 Tumor susceptibility gene 101 protein OS Mus musculus GN Tsg101 PE 1 SV 2
blastp_uniprot_sprot sp|Q6IRE4|TS101_RAT 28 372 + 345 Gaps:30 92.84 391 30.03 2e-44 Tumor susceptibility gene 101 protein OS Rattus norvegicus GN Tsg101 PE 1 SV 1
blastp_uniprot_sprot sp|Q99816|TS101_HUMAN 28 372 + 345 Gaps:31 92.82 390 30.39 9e-42 Tumor susceptibility gene 101 protein OS Homo sapiens GN TSG101 PE 1 SV 2
blastp_uniprot_sprot sp|Q66KB7|UEVLD_XENTR 28 152 + 125 Gaps:1 26.05 476 37.90 6e-22 Ubiquitin-conjugating enzyme E2 variant 3 OS Xenopus tropicalis GN uevld PE 2 SV 1
blastp_uniprot_sprot sp|Q6DBY5|UEVLD_DANRE 39 180 + 142 Gaps:1 29.94 471 32.62 1e-18 Ubiquitin-conjugating enzyme E2 variant 3 OS Danio rerio GN uevld PE 2 SV 1
blastp_uniprot_sprot sp|Q3U1V6|UEVLD_MOUSE 28 152 + 125 Gaps:1 26.33 471 36.29 5e-18 Ubiquitin-conjugating enzyme E2 variant 3 OS Mus musculus GN Uevld PE 2 SV 1
blastp_uniprot_sprot sp|Q8IX04|UEVLD_HUMAN 40 152 + 113 Gaps:1 23.78 471 37.50 2e-17 Ubiquitin-conjugating enzyme E2 variant 3 OS Homo sapiens GN UEVLD PE 1 SV 2
blastp_uniprot_sprot sp|P25604|STP22_YEAST 34 373 + 340 Gaps:17 90.13 385 24.50 1e-14 Suppressor protein STP22 of temperature-sensitive alpha-factor receptor and arginine permease OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN STP22 PE 1 SV 3

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 30 150 121 PF05743 none UEV domain IPR008883
Coils 254 282 29 Coil none none none
ProSiteProfiles 10 154 145 PS51322 none UEV domain profile. IPR008883
ProSiteProfiles 313 381 69 PS51312 none Steadiness box (SB) domain profile. IPR017916
SUPERFAMILY 313 373 61 SSF140111 none none none
SUPERFAMILY 223 317 95 SSF46966 none none none
Gene3D 12 153 142 G3DSA:3.10.110.10 none none IPR016135
PANTHER 1 390 390 PTHR23306 none none none
PANTHER 1 390 390 PTHR23306:SF3 none none none
Pfam 306 370 65 PF09454 none Vps23 core domain IPR017916
SUPERFAMILY 13 150 138 SSF54495 none none IPR016135

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

0 Targeting