Protein : Qrob_P0390950.2 Q. robur
Protein Identifier  ? Qrob_P0390950.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) PTHR14140:SF27 - PROTEIN SHISA-5 (PTHR14140:SF27) Code Enzyme  EC:2.1.1.43
Gene Prediction Quality  validated Protein length 

Sequence

Length: 221  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0042393 histone binding Interacting selectively and non-covalently with a histone, any of a group of water-soluble proteins found in association with the DNA of plant and animal chromosomes. They are involved in the condensation and coiling of chromosomes during cell division and have also been implicated in nonspecific suppression of gene activity.

32 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101212973 34 219 + 186 Gaps:15 19.05 992 48.68 7e-45 histone-lysine N-methyltransferase H3 lysine-9 specific SUVH6-like
blastp_kegg lcl|tcc:TCM_015866 8 219 + 212 Gaps:18 22.84 928 44.34 8e-45 SU(VAR)3-9 putative
blastp_kegg lcl|cmo:103490844 34 219 + 186 Gaps:15 19.03 993 48.68 9e-45 histone-lysine N-methyltransferase H3 lysine-9 specific SUVH6-like
blastp_kegg lcl|pper:PRUPE_ppa000541mg 1 219 + 219 Gaps:17 19.87 1107 45.45 9e-44 hypothetical protein
blastp_kegg lcl|pmum:103337130 1 219 + 219 Gaps:17 19.66 1119 45.00 1e-43 uncharacterized LOC103337130
blastp_kegg lcl|cam:101489576 44 219 + 176 Gaps:11 16.62 1077 49.72 2e-43 histone-lysine N-methyltransferase H3 lysine-9 specific SUVH6-like
blastp_kegg lcl|eus:EUTSA_v10000700mg 6 219 + 214 Gaps:28 28.09 769 45.83 6e-43 hypothetical protein
blastp_kegg lcl|pop:POPTR_0003s08130g 1 219 + 219 Gaps:32 21.82 976 45.54 7e-43 hypothetical protein
blastp_kegg lcl|ath:AT2G35160 45 219 + 175 Gaps:12 23.55 794 47.59 2e-42 SUVH5 histone-lysine N-methyltransferase H3 lysine-9 specific SUVH5
blastp_kegg lcl|mtr:MTR_5g013420 41 219 + 179 Gaps:13 16.87 1091 48.37 3e-42 Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH6
blastp_pdb 3q0f_A 96 219 + 124 Gaps:4 76.65 167 56.25 5e-40 mol:protein length:167 Histone-lysine N-methyltransferase H3 lysine
blastp_pdb 3q0f_X 96 219 + 124 Gaps:4 76.65 167 56.25 5e-40 mol:protein length:167 Histone-lysine N-methyltransferase H3 lysine
blastp_pdb 3q0d_A 96 219 + 124 Gaps:4 76.65 167 56.25 5e-40 mol:protein length:167 Histone-lysine N-methyltransferase H3 lysine
blastp_pdb 3q0d_X 96 219 + 124 Gaps:4 76.65 167 56.25 5e-40 mol:protein length:167 Histone-lysine N-methyltransferase H3 lysine
blastp_pdb 3q0c_A 96 219 + 124 Gaps:4 76.65 167 56.25 5e-40 mol:protein length:167 Histone-lysine N-methyltransferase H3 lysine
blastp_pdb 3q0c_X 96 219 + 124 Gaps:4 76.65 167 56.25 5e-40 mol:protein length:167 Histone-lysine N-methyltransferase H3 lysine
blastp_pdb 3q0b_X 96 219 + 124 Gaps:4 76.65 167 56.25 5e-40 mol:protein length:167 Histone-lysine N-methyltransferase H3 lysine
blastp_pdb 3oln_B 91 219 + 129 Gaps:23 63.20 231 33.56 6e-13 mol:protein length:231 E3 ubiquitin-protein ligase UHRF2
blastp_pdb 3oln_A 91 219 + 129 Gaps:23 63.20 231 33.56 6e-13 mol:protein length:231 E3 ubiquitin-protein ligase UHRF2
blastp_pdb 3fde_B 90 219 + 130 Gaps:22 68.87 212 32.19 2e-10 mol:protein length:212 E3 ubiquitin-protein ligase UHRF1
blastp_uniprot_sprot sp|O82175|SUVH5_ARATH 45 219 + 175 Gaps:12 23.55 794 47.59 9e-44 Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH5 OS Arabidopsis thaliana GN SUVH5 PE 1 SV 1
blastp_uniprot_sprot sp|Q8VZ17|SUVH6_ARATH 47 219 + 173 Gaps:18 23.92 790 44.97 1e-41 Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH6 OS Arabidopsis thaliana GN SUVH6 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FHI0|YDG1_ARATH 47 219 + 173 Gaps:16 54.57 328 41.34 4e-34 YDG domain-containing protein At5g47150 OS Arabidopsis thaliana GN At5g47150 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LVU3|YDG2_ARATH 47 219 + 173 Gaps:16 43.13 415 39.11 7e-27 YDG domain-containing protein At5g47160 OS Arabidopsis thaliana GN At5g47160 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C5P4|SUVH3_ARATH 33 219 + 187 Gaps:11 27.80 669 43.01 7e-26 Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH3 OS Arabidopsis thaliana GN SUVH3 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FF80|SUVH1_ARATH 97 219 + 123 Gaps:10 18.36 670 52.03 1e-25 Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH1 OS Arabidopsis thaliana GN SUVH1 PE 2 SV 1
blastp_uniprot_sprot sp|Q93YF5|SUVH1_TOBAC 72 219 + 148 Gaps:10 21.02 704 49.32 1e-22 Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH1 OS Nicotiana tabacum GN SUVH1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9C5P0|SUVH8_ARATH 22 219 + 198 Gaps:30 24.90 755 40.96 5e-20 Histone-lysine N-methyltransferase H3 lysine-9 specific SUVH8 OS Arabidopsis thaliana GN SUVH8 PE 3 SV 1
blastp_uniprot_sprot sp|Q9T0G7|SUVH9_ARATH 77 219 + 143 Gaps:9 22.15 650 37.50 4e-19 Probable histone-lysine N-methyltransferase H3 lysine-9 specific SUVH9 OS Arabidopsis thaliana GN SUVH9 PE 2 SV 1
blastp_uniprot_sprot sp|O22781|SUVH2_ARATH 72 219 + 148 Gaps:9 22.89 651 36.91 7e-19 Histone-lysine N-methyltransferase H3 lysine-9 H3 lysine-27 H4 lysine-20 and cytosine specific SUVH2 OS Arabidopsis thaliana GN SUVH2 PE 1 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 108 219 112 G3DSA:2.30.280.10 none none IPR003105
PANTHER 94 219 126 PTHR14140 none none none
ProSiteProfiles 97 220 124 PS51015 none YDG domain profile. IPR003105
SMART 92 219 128 SM00466 none SET and RING finger associated domain. Domain of unknown function in SET domain containing proteins and in Deinococcus radiodurans DRA1533. IPR003105
Pfam 94 219 126 PF02182 none SAD/SRA domain IPR003105
SUPERFAMILY 84 219 136 SSF88697 none none IPR015947
PANTHER 94 219 126 PTHR14140:SF27 none none none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

0 Targeting