3 GO Terms
| Identifier | Name | Description |
|---|---|---|
| GO:0008152 | metabolic process | The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation. |
| GO:0003951 | NAD+ kinase activity | Catalysis of the reaction: ATP + NAD(+) = ADP + 2 H(+) + NADP(+). |
| GO:0006741 | NADP biosynthetic process | The chemical reactions and pathways resulting in the formation of nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; biosynthesis may be of either the oxidized form, NADP, or the reduced form, NADPH. |
14 Blast
| Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
|---|---|---|---|---|---|---|---|---|---|---|---|
| blastp_kegg | lcl|gmx:100813625 | 12 | 235 | + | 224 | Gaps:10 | 44.15 | 521 | 73.04 | 4e-107 | NAD(H) kinase 1-like |
| blastp_kegg | lcl|gmx:100806276 | 12 | 234 | + | 223 | Gaps:10 | 43.95 | 521 | 70.74 | 4e-103 | NAD(H) kinase 1-like |
| blastp_kegg | lcl|vvi:100243315 | 12 | 235 | + | 224 | Gaps:11 | 44.25 | 522 | 71.43 | 7e-100 | NAD(H) kinase 1-like |
| blastp_kegg | lcl|cam:101504091 | 12 | 235 | + | 224 | Gaps:11 | 44.47 | 524 | 70.39 | 1e-99 | NAD(H) kinase 1-like |
| blastp_kegg | lcl|pmum:103326864 | 12 | 235 | + | 224 | Gaps:13 | 44.04 | 520 | 74.67 | 2e-98 | NAD(H) kinase 1 |
| blastp_kegg | lcl|tcc:TCM_040748 | 12 | 235 | + | 224 | Gaps:22 | 45.81 | 537 | 66.67 | 9e-94 | NAD kinase 1 isoform 1 |
| blastp_kegg | lcl|pxb:103963799 | 12 | 235 | + | 224 | Gaps:52 | 48.50 | 565 | 62.41 | 6e-93 | NAD(H) kinase 1-like |
| blastp_kegg | lcl|mdm:103448248 | 12 | 235 | + | 224 | Gaps:58 | 80.12 | 342 | 59.85 | 6e-92 | NAD(H) kinase 1-like |
| blastp_kegg | lcl|rcu:RCOM_1578630 | 12 | 235 | + | 224 | Gaps:19 | 45.30 | 532 | 67.63 | 7e-92 | poly(p)/ATP NAD kinase putative (EC:2.7.1.86) |
| blastp_kegg | lcl|fve:101290724 | 12 | 235 | + | 224 | Gaps:14 | 43.43 | 525 | 71.05 | 1e-91 | NAD(H) kinase 1-like |
| blastp_uniprot_sprot | sp|Q56YN3|NADK1_ARATH | 8 | 235 | + | 228 | Gaps:8 | 45.04 | 524 | 56.78 | 4e-72 | NAD(H) kinase 1 OS Arabidopsis thaliana GN NADK1 PE 1 SV 2 |
| blastp_uniprot_sprot | sp|Q5JK52|NADK1_ORYSJ | 45 | 235 | + | 191 | Gaps:6 | 36.65 | 532 | 60.00 | 4e-57 | Probable NAD kinase 1 OS Oryza sativa subsp. japonica GN Os01g0957000 PE 2 SV 1 |
| blastp_uniprot_sprot | sp|Q60E60|NADK3_ORYSJ | 42 | 235 | + | 194 | Gaps:8 | 40.89 | 494 | 54.95 | 1e-50 | Putative NAD kinase 3 OS Oryza sativa subsp. japonica GN Os05g0388400 PE 3 SV 2 |
| rpsblast_cdd | gnl|CDD|178523 | 28 | 235 | + | 208 | Gaps:17 | 42.72 | 508 | 70.97 | 4e-89 | PLN02935 PLN02935 Bifunctional NADH kinase/NAD(+) kinase. |
3 Domain Motifs
| Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
|---|---|---|---|---|---|---|---|
| PANTHER | 45 | 235 | 191 | PTHR20275:SF0 | none | none | none |
| Coils | 75 | 103 | 29 | Coil | none | none | none |
| PANTHER | 45 | 235 | 191 | PTHR20275 | "KEGG:00760+2.7.1.23","MetaCyc:PWY-5083","MetaCyc:PWY-7268","MetaCyc:PWY-7269";signature_desc=FAMILY NOT NAMED | none | IPR002504 |
8 Qtllist
| Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
|---|---|---|---|---|---|---|---|---|---|---|
| Bourran1_2004_QTL1_peak_Bud_burst_A4 | Qrob_Chr01 | 1 | s_1AMVCC_444 | s_1BE1VC_321 | 4 | 0 | 31 | lod | 3,2 | 7,4 |
| Bourran2_2003_QTL8_peak_Bud_burst_A4 | Qrob_Chr01 | 1 | s_1AH7I_610 | s_1BE1VC_321 | 4,6 | 0 | 28 | lod | 3,5 | 7,4 |
| Bourran2_2007_QTL6_peak_Bud_burst_3P | Qrob_Chr01 | 1 | s_1BE1VC_321 | s_1A5JRZ_890 | 5 | 0 | 25 | lod | 2,4 | 6 |
| Bourran2_2014_nLBD*_A4 | Qrob_Chr08 | 8 | v_12498_318 | v_12364_308 | 34,91 | 16,12 | 53,62 | lod | 2,4961 | 5,2 |
| Bourran2_2014_rEpiBC*_A4 | Qrob_Chr08 | 8 | v_12498_318 | v_12364_308 | 35,77 | 14,11 | 55,31 | lod | 2,9413 | 6,2 |
| Bourran2_2015_nEpiBC_3P | Qrob_Chr12 | 12 | s_1B73S5_217 | v_7050_211 | 28,31 | 26,37 | 28,45 | lod | 4.5 | 11.6 |
| Bourran2_2015_rEpiBC_3P | Qrob_Chr08 | 8 | s_A9TNV_543 | v_11837_70 | 9,93 | 9,83 | 11,15 | lod | 3.3 | 7.3 |
| Bourran2_2014_nSeqBC*_A4 | Qrob_Chr01 | 1 | s_1CFE4C_2114 | s_1BDNCB_819 | 15,25 | 2 | 28,5 | lod | 2,9903 | 8,3 |
