Protein : Qrob_P0384870.2 Q. robur
Protein Identifier  ? Qrob_P0384870.2 Organism . Name  Quercus robur
Score  38.2 Score Type  egn
Protein Description  (M=18) K04567 - lysyl-tRNA synthetase, class II [EC:6.1.1.6] Code Enzyme  EC:6.1.1.6
Gene Prediction Quality  validated Protein length 

Sequence

Length: 631  
Kegg Orthology  K04567
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0 Synonyms

8 GO Terms

Identifier Name Description
GO:0003676 nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0004812 aminoacyl-tRNA ligase activity Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
GO:0006418 tRNA aminoacylation for protein translation The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
GO:0004824 lysine-tRNA ligase activity Catalysis of the reaction: ATP + L-lysine + tRNA(Lys) = AMP + diphosphate + L-lysyl-tRNA(Lys).
GO:0006430 lysyl-tRNA aminoacylation The process of coupling lysine to lysyl-tRNA, catalyzed by lysyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.

45 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100262532 6 620 + 615 Gaps:21 95.96 619 80.81 0.0 lysyl-tRNA synthetase-like
blastp_kegg lcl|vvi:100242505 6 619 + 614 Gaps:21 95.65 620 80.27 0.0 lysyl-tRNA synthetase-like
blastp_kegg lcl|tcc:TCM_019889 10 620 + 611 Gaps:23 96.25 613 80.34 0.0 Lysyl-tRNA synthetase 1 isoform 1
blastp_kegg lcl|cit:102615402 6 619 + 614 Gaps:25 96.31 651 73.05 0.0 lysine--tRNA ligase-like
blastp_kegg lcl|cmo:103492812 4 619 + 616 Gaps:28 87.37 689 77.57 0.0 lysine--tRNA ligase
blastp_kegg lcl|pmum:103323536 17 625 + 609 Gaps:23 96.43 616 78.45 0.0 lysine--tRNA ligase
blastp_kegg lcl|gmx:100809106 13 615 + 603 Gaps:21 97.99 596 78.42 0.0 lysine--tRNA ligase-like
blastp_kegg lcl|mdm:103453842 16 621 + 606 Gaps:24 96.41 612 77.63 0.0 lysine--tRNA ligase
blastp_kegg lcl|csv:101204394 7 619 + 613 Gaps:22 85.98 692 76.64 0.0 lysine--tRNA ligase-like
blastp_kegg lcl|pmum:103323559 16 621 + 606 Gaps:22 89.39 660 77.46 0.0 lysine--tRNA ligase-like
blastp_pdb 3bju_D 65 616 + 552 Gaps:48 97.50 521 60.83 0.0 mol:protein length:521 Lysyl-tRNA synthetase
blastp_pdb 3bju_C 65 616 + 552 Gaps:48 97.50 521 60.83 0.0 mol:protein length:521 Lysyl-tRNA synthetase
blastp_pdb 3bju_B 65 616 + 552 Gaps:48 97.50 521 60.83 0.0 mol:protein length:521 Lysyl-tRNA synthetase
blastp_pdb 3bju_A 65 616 + 552 Gaps:48 97.50 521 60.83 0.0 mol:protein length:521 Lysyl-tRNA synthetase
blastp_pdb 3e9i_D 116 612 + 497 Gaps:60 88.64 493 47.37 1e-122 mol:protein length:493 Lysyl-tRNA synthetase
blastp_pdb 3e9i_C 116 612 + 497 Gaps:60 88.64 493 47.37 1e-122 mol:protein length:493 Lysyl-tRNA synthetase
blastp_pdb 3e9i_B 116 612 + 497 Gaps:60 88.64 493 47.37 1e-122 mol:protein length:493 Lysyl-tRNA synthetase
blastp_pdb 3e9i_A 116 612 + 497 Gaps:60 88.64 493 47.37 1e-122 mol:protein length:493 Lysyl-tRNA synthetase
blastp_pdb 3e9h_D 116 612 + 497 Gaps:60 88.64 493 47.37 1e-122 mol:protein length:493 Lysyl-tRNA synthetase
blastp_pdb 3e9h_C 116 612 + 497 Gaps:60 88.64 493 47.37 1e-122 mol:protein length:493 Lysyl-tRNA synthetase
blastp_uniprot_sprot sp|Q9ZPI1|SYK_ARATH 41 630 + 590 Gaps:27 89.94 626 74.07 0.0 Lysine--tRNA ligase OS Arabidopsis thaliana GN At3g11710 PE 2 SV 1
blastp_uniprot_sprot sp|Q6F2U9|SYK_ORYSJ 56 615 + 560 Gaps:25 88.87 602 75.70 0.0 Lysine--tRNA ligase OS Oryza sativa subsp. japonica GN Os03g0586800 PE 2 SV 1
blastp_uniprot_sprot sp|Q43776|SYK_SOLLC 10 614 + 605 Gaps:27 99.66 588 62.97 0.0 Lysine--tRNA ligase OS Solanum lycopersicum GN LYSRS PE 2 SV 1
blastp_uniprot_sprot sp|Q99MN1|SYK_MOUSE 15 629 + 615 Gaps:52 96.64 595 57.91 0.0 Lysine--tRNA ligase OS Mus musculus GN Kars PE 1 SV 1
blastp_uniprot_sprot sp|P37879|SYK_CRIGR 7 629 + 623 Gaps:58 97.32 597 57.66 0.0 Lysine--tRNA ligase OS Cricetulus griseus GN KARS PE 1 SV 1
blastp_uniprot_sprot sp|Q15046|SYK_HUMAN 17 629 + 613 Gaps:53 96.15 597 56.62 0.0 Lysine--tRNA ligase OS Homo sapiens GN KARS PE 1 SV 3
blastp_uniprot_sprot sp|Q9UUE6|SYKC_SCHPO 11 614 + 604 Gaps:59 94.92 591 53.48 0.0 Lysine--tRNA ligase cytoplasmic OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN krs1 PE 3 SV 1
blastp_uniprot_sprot sp|Q22099|SYK_CAEEL 17 615 + 599 Gaps:55 96.15 572 54.73 0.0 Lysine--tRNA ligase OS Caenorhabditis elegans GN krs-1 PE 3 SV 1
blastp_uniprot_sprot sp|P15180|SYKC_YEAST 12 613 + 602 Gaps:63 94.25 591 53.68 0.0 Lysine--tRNA ligase cytoplasmic OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN KRS1 PE 1 SV 2
blastp_uniprot_sprot sp|Q8SS56|SYKC_ENCCU 85 614 + 530 Gaps:55 94.31 510 54.26 7e-168 Probable lysine--tRNA ligase cytoplasmic OS Encephalitozoon cuniculi (strain GB-M1) GN ECU04_0580 PE 3 SV 2

20 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 298 314 17 PR00982 "KEGG:00970+6.1.1.6" Lysyl-tRNA synthetase signature IPR018149
PRINTS 345 362 18 PR00982 "KEGG:00970+6.1.1.6" Lysyl-tRNA synthetase signature IPR018149
PRINTS 327 340 14 PR00982 "KEGG:00970+6.1.1.6" Lysyl-tRNA synthetase signature IPR018149
PRINTS 479 495 17 PR00982 "KEGG:00970+6.1.1.6" Lysyl-tRNA synthetase signature IPR018149
PRINTS 282 292 11 PR00982 "KEGG:00970+6.1.1.6" Lysyl-tRNA synthetase signature IPR018149
Pfam 245 586 342 PF00152 "Reactome:REACT_71" tRNA synthetases class II (D, K and N) IPR004364
TIGRFAM 237 586 350 TIGR00499 "KEGG:00970+6.1.1.6" lysS_bact: lysine--tRNA ligase IPR002313
SUPERFAMILY 65 209 145 SSF50249 none none IPR012340
ProSiteProfiles 273 613 341 PS50862 "Reactome:REACT_71" Aminoacyl-transfer RNA synthetases class-II family profile. IPR006195
Gene3D 243 586 344 G3DSA:3.30.930.10 none none none
Coils 19 51 33 Coil none none none
Hamap 73 616 544 MF_00252 "KEGG:00970+6.1.1.6" Lysine--tRNA ligase [lysS]. IPR002313
PANTHER 1 586 586 PTHR22594:SF4 none none none
PANTHER 604 619 16 PTHR22594:SF4 none none none
PANTHER 1 586 586 PTHR22594 "Reactome:REACT_71";signature_desc=ASPARTYL/LYSYL-TRNA SYNTHETASE none IPR018150
PANTHER 604 619 16 PTHR22594 "Reactome:REACT_71";signature_desc=ASPARTYL/LYSYL-TRNA SYNTHETASE none IPR018150
Pfam 120 198 79 PF01336 none OB-fold nucleic acid binding domain IPR004365
SUPERFAMILY 245 586 342 SSF55681 none none none
PIRSF 7 626 620 PIRSF039101 "KEGG:00970+6.1.1.6" none IPR002313
Gene3D 68 209 142 G3DSA:2.40.50.140 none none IPR012340

0 Localization

0 Qtllist

0 Targeting