Protein : Qrob_P0382890.2 Q. robur
Protein Identifier  ? Qrob_P0382890.2 Organism . Name  Quercus robur
Score  88.0 Score Type  egn
Protein Description  (M=2) PTHR15615:SF7 - CYCLIN-U4-2-RELATED (PTHR15615:SF7) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 113  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity Any process that modulates the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity.
GO:0019901 protein kinase binding Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0014s04930g 22 112 + 91 Gaps:1 44.55 202 90.00 2e-51 cyclin family protein
blastp_kegg lcl|rcu:RCOM_0658420 22 112 + 91 Gaps:2 44.83 203 85.71 2e-47 cyclin-dependent protein kinase putative
blastp_kegg lcl|pmum:103331531 22 112 + 91 none 45.05 202 81.32 8e-47 cyclin-U4-1-like
blastp_kegg lcl|pper:PRUPE_ppa011642mg 22 112 + 91 none 45.05 202 81.32 8e-47 hypothetical protein
blastp_kegg lcl|fve:101300955 22 112 + 91 Gaps:1 45.10 204 80.43 7e-46 cyclin-U4-1-like
blastp_kegg lcl|pmum:103343910 22 112 + 91 none 44.83 203 80.22 2e-45 cyclin-U4-1-like
blastp_kegg lcl|pper:PRUPE_ppa011614mg 22 112 + 91 none 44.83 203 80.22 2e-44 hypothetical protein
blastp_kegg lcl|tcc:TCM_005750 22 112 + 91 Gaps:2 44.83 203 82.42 2e-44 Cyclin p4 1
blastp_kegg lcl|cam:101500825 22 112 + 91 Gaps:2 44.83 203 80.22 3e-43 cyclin-U4-1-like
blastp_kegg lcl|gmx:100794854 22 112 + 91 Gaps:1 45.54 202 78.26 5e-43 cyclin-U4-1-like
blastp_uniprot_sprot sp|O80513|CCU41_ARATH 22 105 + 84 Gaps:6 38.61 202 70.51 2e-28 Cyclin-U4-1 OS Arabidopsis thaliana GN CYCU4-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FKF6|CCU43_ARATH 23 112 + 90 Gaps:5 43.38 219 51.58 5e-21 Cyclin-U4-3 OS Arabidopsis thaliana GN CYCU4-3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LY16|CCU42_ARATH 23 111 + 89 Gaps:1 40.74 216 52.27 3e-20 Cyclin-U4-2 OS Arabidopsis thaliana GN CYCU4-2 PE 1 SV 1
blastp_uniprot_sprot sp|Q7XC35|CCP41_ORYSJ 23 108 + 86 Gaps:15 34.43 212 61.64 1e-19 Cyclin-P4-1 OS Oryza sativa subsp. japonica GN CYCP4-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q75HV0|CCP31_ORYSJ 21 74 + 54 none 22.88 236 57.41 1e-14 Cyclin-P3-1 OS Oryza sativa subsp. japonica GN CYCP3-1 PE 3 SV 1
blastp_uniprot_sprot sp|Q8LB60|CCU31_ARATH 22 71 + 50 none 22.62 221 54.00 2e-13 Cyclin-U3-1 OS Arabidopsis thaliana GN CYCU3-1 PE 1 SV 2
blastp_uniprot_sprot sp|Q7FAT5|CCP21_ORYSJ 23 72 + 50 none 23.04 217 50.00 4e-11 Cyclin-P2-1 OS Oryza sativa subsp. japonica GN CYCP2-1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M205|CCU22_ARATH 23 72 + 50 none 21.74 230 50.00 2e-10 Cyclin-U2-2 OS Arabidopsis thaliana GN CYCU2-2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SHD3|CCU21_ARATH 23 72 + 50 none 22.52 222 50.00 2e-10 Cyclin-U2-1 OS Arabidopsis thaliana GN CYCU2-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q0J9W0|CCP11_ORYSJ 22 71 + 50 none 18.94 264 38.00 2e-06 Cyclin-P1-1 OS Oryza sativa subsp. japonica GN CYCP1-1 PE 3 SV 2
rpsblast_cdd gnl|CDD|204002 21 54 + 34 none 24.29 140 58.82 9e-09 pfam08613 Cyclin Cyclin. This family includes many different cyclin proteins. Members include the G1/S-specific cyclin pas1 and the phosphate system cyclin PHO80/PHO85.
rpsblast_kog gnl|CDD|36887 22 76 + 55 none 25.23 218 50.91 9e-14 KOG1674 KOG1674 KOG1674 Cyclin [General function prediction only].

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 22 79 58 PTHR15615 none none none
Pfam 22 54 33 PF08613 none Cyclin IPR013922
PANTHER 22 79 58 PTHR15615:SF7 none none none

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

0 Targeting