Protein : Qrob_P0379850.2 Q. robur
Protein Identifier  ? Qrob_P0379850.2 Organism . Name  Quercus robur
Score  93.1 Score Type  egn
Protein Description  (M=1) K09391 - E2F transcription factor 7/8 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 423  
Kegg Orthology  K09391
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0005667 transcription factor complex A protein complex that is capable of associating with DNA by direct binding, or via other DNA-binding proteins or complexes, and regulating transcription.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103483262 58 422 + 365 Gaps:7 95.83 384 70.65 0.0 E2F transcription factor-like E2FE
blastp_kegg lcl|pvu:PHAVU_003G196600g 49 421 + 373 Gaps:16 99.48 381 69.92 0.0 hypothetical protein
blastp_kegg lcl|cam:101505596 48 421 + 374 Gaps:12 99.48 384 68.06 6e-180 E2F transcription factor-like E2FE-like
blastp_kegg lcl|csv:101219210 58 422 + 365 Gaps:4 95.80 381 70.68 1e-179 E2F transcription factor-like E2FE-like
blastp_kegg lcl|gmx:100806151 49 421 + 373 Gaps:10 99.48 381 68.60 4e-178 E2F transcription factor-like E2FE-like
blastp_kegg lcl|gmx:100795252 49 421 + 373 Gaps:9 99.47 380 68.78 7e-178 E2F transcription factor-like E2FE-like
blastp_kegg lcl|tcc:TCM_011971 44 420 + 377 Gaps:12 99.23 388 70.91 8e-177 DP-E2F-like 1 isoform 1
blastp_kegg lcl|pop:POPTR_0012s07700g 54 422 + 369 Gaps:9 97.66 385 67.55 1e-172 POPTRDRAFT_570039 transcription factor family protein
blastp_kegg lcl|pop:POPTR_0015s08160g 54 422 + 369 Gaps:10 97.66 384 67.73 7e-172 POPTRDRAFT_575101 hypothetical protein
blastp_kegg lcl|vvi:100241701 48 422 + 375 Gaps:22 99.21 382 69.13 3e-171 E2F transcription factor-like E2FE-like
blastp_pdb 1cf7_A 53 131 + 79 Gaps:7 97.37 76 48.65 9e-13 mol:protein length:76 PROTEIN (TRANSCRIPTION FACTOR E2F-4)
blastp_uniprot_sprot sp|Q8LSZ4|E2FE_ARATH 59 419 + 361 Gaps:13 91.32 403 60.05 4e-134 E2F transcription factor-like E2FE OS Arabidopsis thaliana GN E2FE PE 2 SV 1
blastp_uniprot_sprot sp|Q8RWL0|E2FF_ARATH 60 413 + 354 Gaps:32 94.35 354 55.09 7e-111 E2F transcription factor-like E2FF OS Arabidopsis thaliana GN E2FF PE 2 SV 1
blastp_uniprot_sprot sp|Q9LFQ9|E2FD_ARATH 60 417 + 358 Gaps:41 97.77 359 47.29 6e-85 E2F transcription factor-like E2FD OS Arabidopsis thaliana GN E2FD PE 1 SV 1
blastp_uniprot_sprot sp|Q6S7F2|E2F7_MOUSE 63 276 + 214 Gaps:27 25.11 904 44.05 3e-45 Transcription factor E2F7 OS Mus musculus GN E2f7 PE 1 SV 1
blastp_uniprot_sprot sp|F6YVB9|E2F7_XENTR 63 276 + 214 Gaps:26 26.22 862 46.90 4e-45 Transcription factor E2F7 OS Xenopus tropicalis GN e2f7 PE 3 SV 1
blastp_uniprot_sprot sp|Q96AV8|E2F7_HUMAN 63 276 + 214 Gaps:27 24.92 911 44.93 4e-45 Transcription factor E2F7 OS Homo sapiens GN E2F7 PE 1 SV 3
blastp_uniprot_sprot sp|E1BE02|E2F7_BOVIN 63 276 + 214 Gaps:13 24.92 911 42.29 1e-44 Transcription factor E2F7 OS Bos taurus GN E2F7 PE 3 SV 1
blastp_uniprot_sprot sp|F1QZ88|E2F8_DANRE 63 306 + 244 Gaps:38 30.75 917 38.30 2e-44 Transcription factor E2F8 OS Danio rerio GN e2f8 PE 3 SV 1
blastp_uniprot_sprot sp|D4A4D7|E2F7_RAT 63 276 + 214 Gaps:27 25.17 902 44.49 1e-43 Transcription factor E2F7 OS Rattus norvegicus GN E2f7 PE 3 SV 1
blastp_uniprot_sprot sp|F1LMN3|E2F8_RAT 63 276 + 214 Gaps:41 27.56 860 44.30 3e-43 Transcription factor E2F8 OS Rattus norvegicus GN E2f8 PE 2 SV 2
rpsblast_cdd gnl|CDD|202203 64 276 + 213 Gaps:15 100.00 67 64.18 8e-21 pfam02319 E2F_TDP E2F/DP family winged-helix DNA-binding domain. This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2 which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2 the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric and amino acids that contact these bases are conserved among all known E2F and DP proteins.
rpsblast_kog gnl|CDD|37789 62 417 + 356 Gaps:24 95.36 388 44.05 3e-88 KOG2578 KOG2578 KOG2578 Transcription factor E2F/dimerization partner (TDP)-like proteins [Transcription].
rpsblast_kog gnl|CDD|37788 2 322 + 321 Gaps:26 46.61 354 33.33 6e-15 KOG2577 KOG2577 KOG2577 Transcription factor E2F/dimerization partner (TDP) [Transcription].

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 64 129 66 PF02319 none E2F/DP family winged-helix DNA-binding domain IPR003316
Pfam 196 276 81 PF02319 none E2F/DP family winged-helix DNA-binding domain IPR003316
PANTHER 58 276 219 PTHR12081:SF7 none none none
Gene3D 193 277 85 G3DSA:1.10.10.10 none none IPR011991
Gene3D 60 130 71 G3DSA:1.10.10.10 none none IPR011991
SUPERFAMILY 198 277 80 SSF46785 none none none
PANTHER 58 276 219 PTHR12081 none none IPR015633
SUPERFAMILY 63 127 65 SSF46785 none none none

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting