Protein : Qrob_P0379430.2 Q. robur
Protein Identifier  ? Qrob_P0379430.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=5) PF04690 - YABBY protein Gene Prediction Quality  validated
Protein length 

Sequence

Length: 135  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0007275 multicellular organismal development The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100267708 8 117 + 110 none 52.13 211 84.55 5e-62 axial regulator YABBY 1-like
blastp_kegg lcl|rcu:RCOM_0195630 8 119 + 112 none 52.34 214 82.14 1e-61 Axial regulator YABBY1 putative
blastp_kegg lcl|cic:CICLE_v10021834mg 8 117 + 110 none 51.16 215 85.45 8e-61 hypothetical protein
blastp_kegg lcl|cit:102622362 8 119 + 112 none 46.09 243 83.93 2e-60 axial regulator YABBY 3-like
blastp_kegg lcl|pop:POPTR_0003s11230g 8 117 + 110 Gaps:1 52.11 213 84.68 3e-60 POPTRDRAFT_646464 hypothetical protein
blastp_kegg lcl|tcc:TCM_016030 8 119 + 112 none 53.08 211 81.25 4e-59 Plant-specific transcription factor YABBY family protein
blastp_kegg lcl|gmx:100798441 8 119 + 112 Gaps:3 53.49 215 79.13 1e-57 protein YABBY 4-like
blastp_kegg lcl|gmx:100786175 8 119 + 112 Gaps:4 53.27 214 79.82 2e-55 protein YABBY 4-like
blastp_kegg lcl|pper:PRUPE_ppa011209mg 8 119 + 112 Gaps:4 52.97 219 78.45 2e-54 hypothetical protein
blastp_kegg lcl|pmum:103337233 8 117 + 110 Gaps:4 52.05 219 79.82 2e-54 protein YABBY 4-like
blastp_uniprot_sprot sp|Q6H668|YAB4_ORYSJ 9 118 + 110 Gaps:30 54.69 256 46.43 2e-25 Protein YABBY 4 OS Oryza sativa subsp. japonica GN YAB4 PE 2 SV 1
blastp_uniprot_sprot sp|A2X7Q3|YAB4_ORYSI 9 118 + 110 Gaps:30 54.69 256 46.43 2e-25 Protein YABBY 4 OS Oryza sativa subsp. indica GN YAB4 PE 3 SV 1
blastp_uniprot_sprot sp|O22152|YAB1_ARATH 9 117 + 109 Gaps:11 50.66 229 52.59 2e-25 Axial regulator YABBY 1 OS Arabidopsis thaliana GN YAB1 PE 1 SV 1
blastp_uniprot_sprot sp|Q0JBF0|YAB5_ORYSJ 9 118 + 110 Gaps:30 52.63 266 45.00 7e-25 Protein YABBY 5 OS Oryza sativa subsp. japonica GN YAB5 PE 2 SV 1
blastp_uniprot_sprot sp|Q01JG2|YAB5_ORYSI 9 118 + 110 Gaps:30 52.63 266 45.00 7e-25 Protein YABBY 5 OS Oryza sativa subsp. indica GN YAB5 PE 3 SV 2
blastp_uniprot_sprot sp|Q9XFB1|YAB3_ARATH 8 117 + 110 Gaps:23 53.75 240 51.94 2e-18 Axial regulator YABBY 3 OS Arabidopsis thaliana GN YAB3 PE 1 SV 1
blastp_uniprot_sprot sp|Q8GW46|YAB5_ARATH 9 117 + 109 Gaps:15 57.32 164 48.94 3e-17 Axial regulator YABBY 5 OS Arabidopsis thaliana GN YAB5 PE 2 SV 1
blastp_uniprot_sprot sp|Q8L556|YAB3_ORYSJ 19 118 + 100 Gaps:50 47.92 313 37.33 1e-13 Protein YABBY 3 OS Oryza sativa subsp. japonica GN YAB3 PE 2 SV 1
blastp_uniprot_sprot sp|Q10FZ7|YAB2_ORYSJ 9 117 + 109 Gaps:24 54.30 186 46.53 2e-13 Protein YABBY 2 OS Oryza sativa subsp. japonica GN YAB2 PE 2 SV 1
blastp_uniprot_sprot sp|Q2QM17|YAB6_ORYSJ 9 118 + 110 Gaps:27 57.49 207 42.02 4e-13 Protein YABBY 6 OS Oryza sativa subsp. japonica GN YAB6 PE 2 SV 1
rpsblast_cdd gnl|CDD|113458 9 117 + 109 Gaps:3 65.88 170 42.86 9e-23 pfam04690 YABBY YABBY protein. YABBY proteins are a group of plant-specific transcription involved in the specification of abaxial polarity in lateral organs.

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 20 134 115 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 9 118 110 PF04690 none YABBY protein IPR006780
PANTHER 13 117 105 PTHR31675 none none IPR006780
Phobius 1 19 19 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 3 11 9 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 13 117 105 PTHR31675:SF0 none none none
Phobius 12 19 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 19 18

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting