Protein : Qrob_P0377020.2 Q. robur
Protein Identifier  ? Qrob_P0377020.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) PTHR10809//PTHR10809:SF44 - VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 246  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005789 endoplasmic reticulum membrane The lipid bilayer surrounding the endoplasmic reticulum.

29 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103326286 1 245 + 245 Gaps:40 100.00 257 74.71 4e-104 vesicle-associated protein 4-1
blastp_kegg lcl|vvi:100243498 1 245 + 245 Gaps:39 100.00 264 69.70 3e-103 vesicle-associated protein 4-1-like
blastp_kegg lcl|pop:POPTR_0001s41870g 1 242 + 242 Gaps:35 99.62 264 70.34 1e-101 hypothetical protein
blastp_kegg lcl|brp:103851989 1 245 + 245 Gaps:40 99.62 264 66.16 3e-99 vesicle-associated protein 4-1
blastp_kegg lcl|mdm:103448603 1 245 + 245 Gaps:41 100.00 258 70.54 1e-98 vesicle-associated protein 4-1-like
blastp_kegg lcl|pxb:103941542 1 244 + 244 Gaps:41 99.61 258 70.82 9e-98 vesicle-associated protein 4-1-like
blastp_kegg lcl|pop:POPTR_0011s12720g 17 243 + 227 Gaps:30 95.08 264 70.12 2e-97 POPTRDRAFT_568977 membrane-associated mannitol-induced family protein
blastp_kegg lcl|pper:PRUPE_ppa010173mg 1 245 + 245 Gaps:41 100.00 260 73.85 2e-97 hypothetical protein
blastp_kegg lcl|mdm:103429960 1 245 + 245 Gaps:40 100.00 257 72.76 5e-97 vesicle-associated protein 4-1-like
blastp_kegg lcl|pvu:PHAVU_005G086900g 16 244 + 229 Gaps:46 95.53 246 71.49 6e-96 hypothetical protein
blastp_pdb 2rr3_A 82 172 + 91 Gaps:5 66.15 130 36.05 3e-07 mol:protein length:130 Vesicle-associated membrane protein-associate
blastp_pdb 2cri_A 82 172 + 91 Gaps:5 58.50 147 37.21 6e-07 mol:protein length:147 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_F 82 172 + 91 Gaps:5 67.19 128 36.05 9e-07 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_E 82 172 + 91 Gaps:5 67.19 128 36.05 9e-07 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_D 82 172 + 91 Gaps:5 67.19 128 36.05 9e-07 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_C 82 172 + 91 Gaps:5 67.19 128 36.05 9e-07 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_B 82 172 + 91 Gaps:5 67.19 128 36.05 9e-07 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_A 82 172 + 91 Gaps:5 67.19 128 36.05 9e-07 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9l_A 82 172 + 91 Gaps:5 67.19 128 36.05 9e-07 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_uniprot_sprot sp|Q1ECE0|VAP41_ARATH 20 244 + 225 Gaps:31 93.23 266 70.16 6e-94 Vesicle-associated protein 4-1 OS Arabidopsis thaliana GN PVA41 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYN2|VAP42_ARATH 51 244 + 194 Gaps:32 74.58 295 65.00 1e-89 Vesicle-associated protein 4-2 OS Arabidopsis thaliana GN PVA42 PE 1 SV 1
blastp_uniprot_sprot sp|Q8LPQ7|VAP43_ARATH 67 245 + 179 Gaps:28 70.73 287 60.59 7e-69 Vesicle-associated protein 4-3 OS Arabidopsis thaliana GN PVA43 PE 2 SV 1
blastp_uniprot_sprot sp|Q84WW5|VAP13_ARATH 88 177 + 90 Gaps:5 36.40 239 36.78 2e-06 Vesicle-associated protein 1-3 OS Arabidopsis thaliana GN PVA13 PE 2 SV 1
blastp_uniprot_sprot sp|Q5R601|VAPA_PONAB 82 172 + 91 Gaps:5 34.54 249 36.05 4e-06 Vesicle-associated membrane protein-associated protein A OS Pongo abelii GN VAPA PE 2 SV 2
blastp_uniprot_sprot sp|Q9P0L0|VAPA_HUMAN 82 172 + 91 Gaps:5 34.54 249 36.05 4e-06 Vesicle-associated membrane protein-associated protein A OS Homo sapiens GN VAPA PE 1 SV 3
blastp_uniprot_sprot sp|Q9WV55|VAPA_MOUSE 82 172 + 91 Gaps:5 34.54 249 37.21 7e-06 Vesicle-associated membrane protein-associated protein A OS Mus musculus GN Vapa PE 1 SV 2
blastp_uniprot_sprot sp|Q0VCY1|VAPA_BOVIN 82 172 + 91 Gaps:5 34.54 249 36.05 8e-06 Vesicle-associated membrane protein-associated protein A OS Bos taurus GN VAPA PE 2 SV 1
rpsblast_cdd gnl|CDD|201362 82 185 + 104 Gaps:7 90.83 109 35.35 2e-20 pfam00635 Motile_Sperm MSP (Major sperm protein) domain. Major sperm proteins are involved in sperm motility. These proteins oligomerise to form filaments. This family contains many other proteins.
rpsblast_kog gnl|CDD|35660 74 175 + 102 Gaps:4 44.95 218 40.82 3e-15 KOG0439 KOG0439 KOG0439 VAMP-associated protein involved in inositol metabolism [Intracellular trafficking secretion and vesicular transport].

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 56 244 189 PTHR10809:SF44 none none none
Pfam 82 186 105 PF00635 none MSP (Major sperm protein) domain IPR000535
PANTHER 56 244 189 PTHR10809 "Reactome:REACT_22258";signature_desc=VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN none IPR016763
Gene3D 78 193 116 G3DSA:2.60.40.360 none none IPR008962
ProSiteProfiles 81 244 164 PS50202 none Major sperm protein (MSP) domain profile. IPR000535
Coils 186 207 22 Coil none none none
SUPERFAMILY 70 191 122 SSF49354 none none IPR008962

0 Localization

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

0 Targeting