Protein : Qrob_P0376820.2 Q. robur
Protein Identifier  ? Qrob_P0376820.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR23310//PTHR23310:SF59 - ACYL-COA-BINDING PROTEIN, ACBP // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 284  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0000062 fatty-acyl-CoA binding Interacting selectively and non-covalently with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0002s12110g 1 273 + 273 Gaps:22 80.94 362 45.05 4e-60 POPTRDRAFT_551800 hypothetical protein
blastp_kegg lcl|pop:POPTR_0014s01890g 1 273 + 273 Gaps:39 81.60 375 44.77 2e-59 hypothetical protein
blastp_kegg lcl|tcc:TCM_034733 1 273 + 273 Gaps:57 84.07 383 42.55 3e-59 Acyl-CoA-binding domain 3 putative
blastp_kegg lcl|vvi:100248941 1 271 + 271 Gaps:45 78.20 289 56.19 2e-56 ACBP acyl-CoA-binding domain-containing protein 3-like
blastp_kegg lcl|cit:102618312 1 274 + 274 Gaps:52 79.74 306 51.64 6e-56 acyl-CoA-binding domain-containing protein 3-like
blastp_kegg lcl|cic:CICLE_v10001990mg 1 274 + 274 Gaps:48 79.73 301 52.50 3e-55 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1588020 1 272 + 272 Gaps:56 82.22 343 42.91 2e-52 acyl-CoA-binding protein acbp putative
blastp_kegg lcl|cam:101489743 1 275 + 275 Gaps:54 80.72 306 50.20 1e-44 acyl-CoA-binding domain-containing protein 3-like
blastp_kegg lcl|gmx:100527318 136 275 + 140 Gaps:8 33.33 408 65.44 1e-44 uncharacterized LOC100527318
blastp_kegg lcl|pvu:PHAVU_001G026200g 142 274 + 133 Gaps:7 31.48 413 67.69 1e-44 hypothetical protein
blastp_pdb 2cqu_A 205 260 + 56 none 48.28 116 46.43 2e-11 mol:protein length:116 peroxisomal D3 D2-enoyl-CoA isomerase
blastp_pdb 3flv_B 206 260 + 55 none 46.22 119 41.82 9e-09 mol:protein length:119 Acyl-CoA-binding domain-containing protein 5
blastp_pdb 3flv_A 206 260 + 55 none 46.22 119 41.82 9e-09 mol:protein length:119 Acyl-CoA-binding domain-containing protein 5
blastp_pdb 2lbb_A 184 269 + 86 Gaps:5 84.38 96 37.04 2e-08 mol:protein length:96 Acyl CoA binding protein
blastp_pdb 1hbk_A 200 271 + 72 none 80.90 89 31.94 1e-07 mol:protein length:89 ACYL-COA BINDING PROTEIN
blastp_pdb 2cop_A 201 270 + 70 Gaps:1 65.14 109 36.62 1e-07 mol:protein length:109 Acyl-Coenzyme A binding domain containing 6
blastp_pdb 2wh5_F 210 259 + 50 none 47.17 106 46.00 2e-06 mol:protein length:106 ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 4
blastp_pdb 2wh5_E 210 259 + 50 none 47.17 106 46.00 2e-06 mol:protein length:106 ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 4
blastp_pdb 2wh5_D 210 259 + 50 none 47.17 106 46.00 2e-06 mol:protein length:106 ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 4
blastp_pdb 2wh5_C 210 259 + 50 none 47.17 106 46.00 2e-06 mol:protein length:106 ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 4
blastp_uniprot_sprot sp|Q9STX1|ACBP3_ARATH 1 270 + 270 Gaps:71 87.57 362 37.85 2e-40 Acyl-CoA-binding domain-containing protein 3 OS Arabidopsis thaliana GN ACBP3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9STP8|ACBP2_ARATH 174 271 + 98 Gaps:3 27.40 354 54.64 1e-25 Acyl-CoA-binding domain-containing protein 2 OS Arabidopsis thaliana GN ACBP2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SM23|ACBP1_ARATH 199 271 + 73 Gaps:1 21.89 338 60.81 8e-23 Acyl-CoA-binding domain-containing protein 1 OS Arabidopsis thaliana GN ACBP1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9WUR2|ECI2_MOUSE 205 262 + 58 none 14.83 391 46.55 5e-11 Enoyl-CoA delta isomerase 2 mitochondrial OS Mus musculus GN Eci2 PE 1 SV 2
blastp_uniprot_sprot sp|Q5XIC0|ECI2_RAT 205 262 + 58 none 14.83 391 44.83 2e-10 Enoyl-CoA delta isomerase 2 mitochondrial OS Rattus norvegicus GN Eci2 PE 1 SV 1
blastp_uniprot_sprot sp|O75521|ECI2_HUMAN 205 260 + 56 none 14.21 394 46.43 2e-10 Enoyl-CoA delta isomerase 2 mitochondrial OS Homo sapiens GN ECI2 PE 1 SV 4
blastp_uniprot_sprot sp|Q54GC8|ACBD6_DICDI 178 280 + 103 Gaps:3 34.72 288 32.00 2e-09 Acyl-CoA-binding domain-containing protein 6 homolog OS Dictyostelium discoideum GN acbd6 PE 3 SV 1
blastp_uniprot_sprot sp|A5WV69|ACB5B_DANRE 174 259 + 86 Gaps:3 20.73 410 37.65 3e-08 Acyl-CoA-binding domain-containing protein 5-B OS Danio rerio GN acbd5b PE 3 SV 1
blastp_uniprot_sprot sp|Q5FXM5|ACBP_DICDI 206 262 + 57 none 67.86 84 42.11 1e-07 Acyl-CoA-binding protein OS Dictyostelium discoideum GN acbA PE 1 SV 1
blastp_uniprot_sprot sp|Q4V8X4|ACBD6_DANRE 162 259 + 98 Gaps:9 30.33 300 39.56 1e-07 Acyl-CoA-binding domain-containing protein 6 OS Danio rerio GN acbd6 PE 2 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 18 22 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 180 266 87 PF00887 none Acyl CoA binding protein IPR000582
Coils 62 83 22 Coil none none none
Gene3D 178 275 98 G3DSA:1.20.80.10 none none IPR014352
PANTHER 137 272 136 PTHR23310 none none none
ProSiteProfiles 180 271 92 PS51228 none Acyl-CoA-binding (ACB) domain profile. IPR000582
SUPERFAMILY 179 270 92 SSF47027 none none IPR000582
Coils 131 152 22 Coil none none none
Phobius 1 22 22 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 1 6 6 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 137 272 136 PTHR23310:SF59 none none none
Phobius 23 283 261 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 7 17 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none

2 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 28 27
TMHMM 7 29 22

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting