Protein : Qrob_P0376240.2 Q. robur
Protein Identifier  ? Qrob_P0376240.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) PTHR23310//PTHR23310:SF59 - ACYL-COA-BINDING PROTEIN, ACBP // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 349  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0000062 fatty-acyl-CoA binding Interacting selectively and non-covalently with acyl-CoA, any derivative of coenzyme A in which the sulfhydryl group is in thiolester linkage with a fatty acyl group.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0014s01890g 1 346 + 346 Gaps:51 97.87 375 46.05 1e-75 hypothetical protein
blastp_kegg lcl|pop:POPTR_0002s12110g 1 342 + 342 Gaps:34 96.69 362 46.29 2e-74 POPTRDRAFT_551800 hypothetical protein
blastp_kegg lcl|tcc:TCM_034733 1 343 + 343 Gaps:78 96.87 383 42.32 2e-63 Acyl-CoA-binding domain 3 putative
blastp_kegg lcl|vvi:100248941 1 342 + 342 Gaps:60 97.58 289 53.19 1e-62 ACBP acyl-CoA-binding domain-containing protein 3-like
blastp_kegg lcl|cic:CICLE_v10001990mg 1 342 + 342 Gaps:62 97.67 301 50.00 5e-60 hypothetical protein
blastp_kegg lcl|cit:102618312 1 342 + 342 Gaps:67 97.71 306 49.50 8e-60 acyl-CoA-binding domain-containing protein 3-like
blastp_kegg lcl|rcu:RCOM_1588020 1 346 + 346 Gaps:76 97.96 343 41.37 8e-57 acyl-CoA-binding protein acbp putative
blastp_kegg lcl|cam:101489743 1 346 + 346 Gaps:69 99.02 306 47.19 3e-48 acyl-CoA-binding domain-containing protein 3-like
blastp_kegg lcl|gmx:100527318 136 348 + 213 Gaps:23 47.55 408 55.15 3e-47 uncharacterized LOC100527318
blastp_kegg lcl|pvu:PHAVU_001G026200g 142 335 + 194 Gaps:22 42.62 413 57.95 1e-45 hypothetical protein
blastp_pdb 2cqu_A 205 260 + 56 none 48.28 116 46.43 3e-11 mol:protein length:116 peroxisomal D3 D2-enoyl-CoA isomerase
blastp_pdb 3flv_B 206 260 + 55 none 46.22 119 41.82 1e-08 mol:protein length:119 Acyl-CoA-binding domain-containing protein 5
blastp_pdb 3flv_A 206 260 + 55 none 46.22 119 41.82 1e-08 mol:protein length:119 Acyl-CoA-binding domain-containing protein 5
blastp_pdb 2lbb_A 206 269 + 64 none 66.67 96 40.62 6e-08 mol:protein length:96 Acyl CoA binding protein
blastp_pdb 1hbk_A 200 271 + 72 none 80.90 89 31.94 1e-07 mol:protein length:89 ACYL-COA BINDING PROTEIN
blastp_pdb 2cop_A 201 270 + 70 Gaps:1 65.14 109 36.62 2e-07 mol:protein length:109 Acyl-Coenzyme A binding domain containing 6
blastp_pdb 2wh5_F 210 259 + 50 none 47.17 106 46.00 3e-06 mol:protein length:106 ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 4
blastp_pdb 2wh5_E 210 259 + 50 none 47.17 106 46.00 3e-06 mol:protein length:106 ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 4
blastp_pdb 2wh5_D 210 259 + 50 none 47.17 106 46.00 3e-06 mol:protein length:106 ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 4
blastp_pdb 2wh5_C 210 259 + 50 none 47.17 106 46.00 3e-06 mol:protein length:106 ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 4
blastp_uniprot_sprot sp|Q9STX1|ACBP3_ARATH 1 323 + 323 Gaps:86 98.07 362 37.18 3e-41 Acyl-CoA-binding domain-containing protein 3 OS Arabidopsis thaliana GN ACBP3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9STP8|ACBP2_ARATH 174 282 + 109 Gaps:7 29.38 354 55.77 4e-27 Acyl-CoA-binding domain-containing protein 2 OS Arabidopsis thaliana GN ACBP2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SM23|ACBP1_ARATH 199 279 + 81 Gaps:5 23.08 338 61.54 1e-22 Acyl-CoA-binding domain-containing protein 1 OS Arabidopsis thaliana GN ACBP1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9WUR2|ECI2_MOUSE 205 262 + 58 none 14.83 391 46.55 1e-10 Enoyl-CoA delta isomerase 2 mitochondrial OS Mus musculus GN Eci2 PE 1 SV 2
blastp_uniprot_sprot sp|Q5XIC0|ECI2_RAT 205 262 + 58 none 14.83 391 44.83 4e-10 Enoyl-CoA delta isomerase 2 mitochondrial OS Rattus norvegicus GN Eci2 PE 1 SV 1
blastp_uniprot_sprot sp|O75521|ECI2_HUMAN 205 260 + 56 none 14.21 394 46.43 5e-10 Enoyl-CoA delta isomerase 2 mitochondrial OS Homo sapiens GN ECI2 PE 1 SV 4
blastp_uniprot_sprot sp|Q54GC8|ACBD6_DICDI 178 269 + 92 Gaps:3 30.90 288 33.71 4e-09 Acyl-CoA-binding domain-containing protein 6 homolog OS Dictyostelium discoideum GN acbd6 PE 3 SV 1
blastp_uniprot_sprot sp|A5WV69|ACB5B_DANRE 173 259 + 87 Gaps:3 20.98 410 37.21 6e-08 Acyl-CoA-binding domain-containing protein 5-B OS Danio rerio GN acbd5b PE 3 SV 1
blastp_uniprot_sprot sp|Q4V8X4|ACBD6_DANRE 162 259 + 98 Gaps:9 30.33 300 39.56 1e-07 Acyl-CoA-binding domain-containing protein 6 OS Danio rerio GN acbd6 PE 2 SV 1
blastp_uniprot_sprot sp|Q9MA55|ACBP4_ARATH 181 269 + 89 Gaps:2 13.62 668 31.87 2e-07 Acyl-CoA-binding domain-containing protein 4 OS Arabidopsis thaliana GN ACBP4 PE 1 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 179 270 92 SSF47027 none none IPR000582
Pfam 180 266 87 PF00887 none Acyl CoA binding protein IPR000582
Phobius 1 6 6 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 23 348 326 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Coils 62 83 22 Coil none none none
Coils 131 152 22 Coil none none none
PANTHER 137 272 136 PTHR23310 none none none
PANTHER 137 272 136 PTHR23310:SF59 none none none
ProSiteProfiles 180 271 92 PS51228 none Acyl-CoA-binding (ACB) domain profile. IPR000582
Phobius 7 17 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 22 22 SIGNAL_PEPTIDE none Signal peptide region none
Gene3D 178 272 95 G3DSA:1.20.80.10 none none IPR014352
Phobius 18 22 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none

2 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 28 27
TMHMM 7 29 22

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting