Protein : Qrob_P0374840.2 Q. robur
Protein Identifier  ? Qrob_P0374840.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=8) K01177 - beta-amylase [EC:3.2.1.2] Code Enzyme  EC:3.2.1.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 562  
Kegg Orthology  K01177
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0000272 polysaccharide catabolic process The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.
GO:0016161 beta-amylase activity Catalysis of the reaction: (1,4-alpha-D-glucosyl)(n+1) + H2O = (1,4-alpha-D-glucosyl)(n-1) + alpha-maltose. This reaction is the hydrolysis of 1,4-alpha-glucosidic linkages in polysaccharides so as to remove successive maltose units from the non-reducing ends of the chains.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103452590 1 560 + 560 Gaps:10 99.82 559 75.27 0.0 beta-amylase 3 chloroplastic-like
blastp_kegg lcl|pxb:103935932 1 560 + 560 Gaps:10 99.82 559 75.09 0.0 beta-amylase 3 chloroplastic-like
blastp_kegg lcl|mdm:103400673 1 560 + 560 Gaps:10 99.82 559 75.27 0.0 beta-amylase 1 chloroplastic-like
blastp_kegg lcl|pxb:103949270 1 560 + 560 Gaps:10 99.82 559 75.09 0.0 beta-amylase 1 chloroplastic-like
blastp_kegg lcl|pmum:103337776 1 560 + 560 Gaps:14 99.82 567 74.73 0.0 beta-amylase 3 chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa003539mg 1 560 + 560 Gaps:14 99.82 567 74.38 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0001s11000g 1 560 + 560 Gaps:8 99.82 555 70.94 0.0 POPTRDRAFT_1066599 hypothetical protein
blastp_kegg lcl|vvi:100258256 48 560 + 513 Gaps:14 85.45 584 78.96 0.0 beta-amylase 1 chloroplastic-like
blastp_kegg lcl|cit:102622262 1 560 + 560 Gaps:25 88.58 604 75.33 0.0 beta-amylase 1 chloroplastic-like
blastp_kegg lcl|csv:101217041 47 556 + 510 Gaps:6 93.04 546 73.43 0.0 beta-amylase 1 chloroplastic-like
blastp_pdb 1fa2_A 98 553 + 456 Gaps:18 92.77 498 40.26 4e-110 mol:protein length:498 BETA-AMYLASE
blastp_pdb 1b1y_A 98 553 + 456 Gaps:21 92.20 500 41.00 6e-109 mol:protein length:500 PROTEIN (BETA-AMYLASE)
blastp_pdb 1byd_A 96 560 + 465 Gaps:25 95.76 495 39.45 1e-108 mol:protein length:495 BETA-AMYLASE
blastp_pdb 1byc_A 96 560 + 465 Gaps:25 95.76 495 39.45 1e-108 mol:protein length:495 BETA-AMYLASE
blastp_pdb 1byb_A 96 560 + 465 Gaps:25 95.76 495 39.45 1e-108 mol:protein length:495 BETA-AMYLASE
blastp_pdb 1bya_A 96 560 + 465 Gaps:25 95.76 495 39.45 1e-108 mol:protein length:495 BETA-AMYLASE
blastp_pdb 1btc_A 96 560 + 465 Gaps:25 96.54 491 39.45 3e-108 mol:protein length:491 BETA-AMYLASE
blastp_pdb 1q6g_A 96 560 + 465 Gaps:25 95.76 495 39.24 3e-108 mol:protein length:495 beta-amylase
blastp_pdb 1q6d_A 96 560 + 465 Gaps:25 95.76 495 39.24 5e-108 mol:protein length:495 beta-amylase
blastp_pdb 1wdp_A 96 560 + 465 Gaps:25 95.76 495 39.24 5e-108 mol:protein length:495 Beta-amylase
blastp_uniprot_sprot sp|O23553|BAM3_ARATH 79 530 + 452 Gaps:10 81.39 548 51.79 2e-158 Beta-amylase 3 chloroplastic OS Arabidopsis thaliana GN BAM3 PE 1 SV 3
blastp_uniprot_sprot sp|Q9LIR6|BAM1_ARATH 97 529 + 433 Gaps:7 75.48 575 51.84 3e-158 Beta-amylase 1 chloroplastic OS Arabidopsis thaliana GN BAM1 PE 1 SV 1
blastp_uniprot_sprot sp|P10537|AMYB_IPOBA 98 553 + 456 Gaps:18 92.59 499 40.26 1e-109 Beta-amylase OS Ipomoea batatas GN BMY1 PE 1 SV 4
blastp_uniprot_sprot sp|O22585|AMYB_MEDSA 96 527 + 432 Gaps:12 86.69 496 40.00 5e-109 Beta-amylase OS Medicago sativa GN BMY1 PE 1 SV 1
blastp_uniprot_sprot sp|P82993|AMYB_HORVS 98 556 + 459 Gaps:21 86.73 535 40.95 3e-108 Beta-amylase OS Hordeum vulgare subsp. spontaneum GN BMY1 PE 1 SV 1
blastp_uniprot_sprot sp|P10538|AMYB_SOYBN 96 560 + 465 Gaps:25 95.56 496 39.45 5e-108 Beta-amylase OS Glycine max GN BMY1 PE 1 SV 3
blastp_uniprot_sprot sp|P16098|AMYB_HORVU 98 556 + 459 Gaps:21 86.73 535 40.73 9e-108 Beta-amylase OS Hordeum vulgare GN BMY1 PE 1 SV 1
blastp_uniprot_sprot sp|O64407|AMYB_VIGUN 96 527 + 432 Gaps:12 86.69 496 40.23 1e-107 Beta-amylase OS Vigna unguiculata GN BMY1 PE 2 SV 1
blastp_uniprot_sprot sp|O65015|AMYB_TRIRP 96 561 + 466 Gaps:23 95.77 496 37.89 2e-106 Beta-amylase OS Trifolium repens GN BMY1 PE 2 SV 1
blastp_uniprot_sprot sp|P25853|BAM5_ARATH 96 527 + 432 Gaps:17 86.55 498 40.14 2e-105 Beta-amylase 5 OS Arabidopsis thaliana GN BAM5 PE 2 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 76 537 462 PTHR31352:SF1 none none none
PANTHER 76 537 462 PTHR31352 none none none
Pfam 99 523 425 PF01373 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Glycosyl hydrolase family 14 IPR001554
SUPERFAMILY 95 537 443 SSF51445 none none IPR017853
Gene3D 95 532 438 G3DSA:3.20.20.80 none none IPR013781
PRINTS 379 395 17 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 343 362 20 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 151 169 19 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 452 474 23 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 173 194 22 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 396 407 12 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 130 144 15 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 265 287 23 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 414 437 24 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554

0 Localization

19 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

0 Targeting