Protein : Qrob_P0374760.2 Q. robur
Protein Identifier  ? Qrob_P0374760.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) PTHR13301//PTHR13301:SF34 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Code Enzyme  EC:2.4.1.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 538  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0030244 cellulose biosynthetic process The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.
GO:0016760 cellulose synthase (UDP-forming) activity Catalysis of the reaction: UDP-glucose + ((1,4)-beta-D-glucosyl)(n) = UDP + ((1,4)-beta-D-glucosyl)(n+1).

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_016501 1 535 + 535 none 72.10 742 64.30 0.0 Cellulose synthase like G3 putative
blastp_kegg lcl|tcc:TCM_016503 1 535 + 535 Gaps:2 72.18 744 64.80 0.0 Cellulose synthase like G3 putative
blastp_kegg lcl|tcc:TCM_016506 1 535 + 535 Gaps:2 72.18 744 64.25 0.0 Cellulose synthase like G3 putative
blastp_kegg lcl|tcc:TCM_016502 1 537 + 537 Gaps:27 76.42 967 64.41 0.0 Cellulose synthase-like protein G3
blastp_kegg lcl|fve:101314092 1 531 + 531 Gaps:2 72.54 732 64.03 0.0 cellulose synthase-like protein G3-like
blastp_kegg lcl|pmum:103337794 1 535 + 535 Gaps:2 72.18 744 62.94 0.0 cellulose synthase-like protein G3
blastp_kegg lcl|pop:POPTR_0003s14230g 1 535 + 535 none 71.91 744 62.62 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0003s14250g 1 532 + 532 Gaps:1 73.42 726 63.60 0.0 POPTRDRAFT_413993 hypothetical protein
blastp_kegg lcl|pop:POPTR_0003s14220g 1 532 + 532 none 71.99 739 62.97 0.0 POPTRDRAFT_554513 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1312160 1 532 + 532 Gaps:2 71.49 747 63.48 0.0 transferase putative (EC:2.4.1.12)
blastp_uniprot_sprot sp|Q0WVN5|CSLG3_ARATH 1 529 + 529 Gaps:4 70.44 751 58.60 0.0 Cellulose synthase-like protein G3 OS Arabidopsis thaliana GN CSLG3 PE 2 SV 2
blastp_uniprot_sprot sp|Q8VYR4|CSLG2_ARATH 1 527 + 527 Gaps:9 72.02 722 55.58 0.0 Cellulose synthase-like protein G2 OS Arabidopsis thaliana GN CSLG2 PE 2 SV 1
blastp_uniprot_sprot sp|Q570S7|CSLG1_ARATH 1 530 + 530 Gaps:4 69.74 760 54.72 0.0 Cellulose synthase-like protein G1 OS Arabidopsis thaliana GN CSLG1 PE 2 SV 1
blastp_uniprot_sprot sp|Q0DXZ1|CSLE2_ORYSJ 1 531 + 531 Gaps:22 71.01 745 38.37 1e-123 Cellulose synthase-like protein E2 OS Oryza sativa subsp. japonica GN CSLE2 PE 2 SV 1
blastp_uniprot_sprot sp|Q651X6|CSLE6_ORYSJ 1 530 + 530 Gaps:16 72.25 728 35.36 6e-115 Cellulose synthase-like protein E6 OS Oryza sativa subsp. japonica GN CSLE6 PE 2 SV 1
blastp_uniprot_sprot sp|Q651X7|CSLE1_ORYSJ 1 520 + 520 Gaps:16 70.56 737 35.38 3e-114 Cellulose synthase-like protein E1 OS Oryza sativa subsp. japonica GN CSLE1 PE 2 SV 2
blastp_uniprot_sprot sp|Q8VZK9|CSLE1_ARATH 1 526 + 526 Gaps:19 70.64 729 39.22 1e-113 Cellulose synthase-like protein E1 OS Arabidopsis thaliana GN CSLE1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SWW6|CESA7_ARATH 2 524 + 523 Gaps:95 56.14 1026 32.47 5e-78 Cellulose synthase A catalytic subunit 7 [UDP-forming] OS Arabidopsis thaliana GN CESA7 PE 1 SV 1
blastp_uniprot_sprot sp|Q69P51|CESA9_ORYSJ 2 524 + 523 Gaps:81 54.60 1055 31.25 8e-78 Cellulose synthase A catalytic subunit 9 [UDP-forming] OS Oryza sativa subsp. japonica GN CESA9 PE 2 SV 1
blastp_uniprot_sprot sp|A2Z1C8|CESA9_ORYSI 2 524 + 523 Gaps:81 54.60 1055 31.25 8e-78 Cellulose synthase A catalytic subunit 9 [UDP-forming] OS Oryza sativa subsp. indica GN CESA9 PE 2 SV 1
rpsblast_cdd gnl|CDD|178481 1 535 + 535 none 72.89 734 69.72 0.0 PLN02893 PLN02893 Cellulose synthase-like protein.
rpsblast_cdd gnl|CDD|177841 2 524 + 523 Gaps:95 55.19 1040 32.23 5e-77 PLN02189 PLN02189 cellulose synthase.
rpsblast_cdd gnl|CDD|177842 43 481 + 439 Gaps:66 62.57 756 33.19 2e-59 PLN02190 PLN02190 cellulose synthase-like protein.
rpsblast_cdd gnl|CDD|178244 2 524 + 523 Gaps:22 47.73 1079 38.06 2e-47 PLN02638 PLN02638 cellulose synthase A (UDP-forming) catalytic subunit.
rpsblast_cdd gnl|CDD|146277 2 530 + 529 Gaps:30 70.53 716 38.22 7e-47 pfam03552 Cellulose_synt Cellulose synthase. Cellulose an aggregate of unbranched polymers of beta-1 4-linked glucose residues is the major component of wood and thus paper and is synthesised by plants most algae some bacteria and fungi and even some animals. The genes that synthesise cellulose in higher plants differ greatly from the well-characterized genes found in Acetobacter and Agrobacterium sp. More correctly designated as 'cellulose synthase catalytic subunits' plant cellulose synthase (CesA) proteins are integral membrane proteins approximately 1 000 amino acids in length. There are a number of highly conserved residues including several motifs shown to be necessary for processive glycosyltransferase activity.
rpsblast_cdd gnl|CDD|178055 2 530 + 529 Gaps:25 47.53 1094 37.12 8e-47 PLN02436 PLN02436 cellulose synthase A.
rpsblast_cdd gnl|CDD|178503 2 524 + 523 Gaps:21 49.81 1044 35.58 1e-44 PLN02915 PLN02915 cellulose synthase A [UDP-forming] catalytic subunit.
rpsblast_cdd gnl|CDD|177846 2 524 + 523 Gaps:25 53.02 977 38.03 6e-44 PLN02195 PLN02195 cellulose synthase A.
rpsblast_cdd gnl|CDD|178022 2 524 + 523 Gaps:20 47.47 1085 36.12 2e-43 PLN02400 PLN02400 cellulose synthase.
rpsblast_cdd gnl|CDD|177890 35 464 + 430 Gaps:49 37.09 1135 37.05 3e-30 PLN02248 PLN02248 cellulose synthase-like protein.

19 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 512 531 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 2 190 189 PF03552 none Cellulose synthase IPR005150
Pfam 203 529 327 PF03552 none Cellulose synthase IPR005150
Phobius 471 481 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 361 381 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 42 438 397 PTHR13301 none none none
Phobius 451 470 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 42 438 397 PTHR13301:SF34 none none none
Phobius 532 537 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 501 511 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 401 423 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 382 400 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 68 190 123 SSF53448 none none IPR029044
SUPERFAMILY 239 368 130 SSF53448 none none IPR029044
Phobius 342 360 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 321 321 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 424 450 27 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 482 500 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 322 341 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

6 Localization

Analysis Start End Length
TMHMM 514 536 22
TMHMM 482 504 22
TMHMM 359 381 22
TMHMM 451 470 19
TMHMM 401 423 22
TMHMM 322 344 22

19 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

0 Targeting