Protein : Qrob_P0374640.2 Q. robur
Protein Identifier  ? Qrob_P0374640.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=40) 2.4.1.12 - Cellulose synthase (UDP-forming). Code Enzyme  EC:2.4.1.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 448  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0030244 cellulose biosynthetic process The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.
GO:0016760 cellulose synthase (UDP-forming) activity Catalysis of the reaction: UDP-glucose + ((1,4)-beta-D-glucosyl)(n) = UDP + ((1,4)-beta-D-glucosyl)(n+1).

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103337794 7 447 + 441 Gaps:102 72.98 744 54.14 0.0 cellulose synthase-like protein G3
blastp_kegg lcl|mdm:103404658 7 447 + 441 Gaps:102 73.61 735 55.08 0.0 cellulose synthase-like protein G3
blastp_kegg lcl|pop:POPTR_0003s14220g 7 446 + 440 Gaps:100 73.07 739 53.52 0.0 POPTRDRAFT_554513 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10019000mg 11 441 + 431 Gaps:105 98.52 542 53.75 0.0 hypothetical protein
blastp_kegg lcl|cit:102624770 7 442 + 436 Gaps:105 72.74 741 53.06 0.0 cellulose synthase-like protein G3-like
blastp_kegg lcl|pop:POPTR_0003s14230g 2 434 + 433 Gaps:100 71.64 744 53.47 0.0 hypothetical protein
blastp_kegg lcl|pmum:103337766 3 447 + 445 Gaps:102 74.15 735 53.39 0.0 cellulose synthase-like protein G3
blastp_kegg lcl|pop:POPTR_0003s14250g 8 446 + 439 Gaps:101 74.38 726 54.07 0.0 POPTRDRAFT_413993 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa001971mg 7 447 + 441 Gaps:103 73.57 734 53.89 0.0 hypothetical protein
blastp_kegg lcl|pxb:103933896 7 447 + 441 Gaps:101 73.64 736 53.51 0.0 cellulose synthase-like protein G3
blastp_uniprot_sprot sp|Q0WVN5|CSLG3_ARATH 7 446 + 440 Gaps:104 71.90 751 44.81 1e-154 Cellulose synthase-like protein G3 OS Arabidopsis thaliana GN CSLG3 PE 2 SV 2
blastp_uniprot_sprot sp|Q8VYR4|CSLG2_ARATH 7 446 + 440 Gaps:109 73.82 722 43.53 2e-143 Cellulose synthase-like protein G2 OS Arabidopsis thaliana GN CSLG2 PE 2 SV 1
blastp_uniprot_sprot sp|Q570S7|CSLG1_ARATH 7 430 + 424 Gaps:106 68.95 760 45.04 7e-142 Cellulose synthase-like protein G1 OS Arabidopsis thaliana GN CSLG1 PE 2 SV 1
blastp_uniprot_sprot sp|Q651X6|CSLE6_ORYSJ 8 431 + 424 Gaps:112 71.43 728 32.12 3e-87 Cellulose synthase-like protein E6 OS Oryza sativa subsp. japonica GN CSLE6 PE 2 SV 1
blastp_uniprot_sprot sp|Q651X7|CSLE1_ORYSJ 8 431 + 424 Gaps:112 71.10 737 31.30 1e-84 Cellulose synthase-like protein E1 OS Oryza sativa subsp. japonica GN CSLE1 PE 2 SV 2
blastp_uniprot_sprot sp|Q0DXZ1|CSLE2_ORYSJ 8 431 + 424 Gaps:104 70.07 745 30.84 1e-83 Cellulose synthase-like protein E2 OS Oryza sativa subsp. japonica GN CSLE2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VZK9|CSLE1_ARATH 7 434 + 428 Gaps:99 70.92 729 30.95 3e-77 Cellulose synthase-like protein E1 OS Arabidopsis thaliana GN CSLE1 PE 1 SV 1
blastp_uniprot_sprot sp|Q339N5|CSLH1_ORYSJ 15 383 + 369 Gaps:131 65.60 750 27.64 1e-38 Cellulose synthase-like protein H1 OS Oryza sativa subsp. japonica GN CSLH1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SWW6|CESA7_ARATH 8 445 + 438 Gaps:114 49.22 1026 32.28 6e-35 Cellulose synthase A catalytic subunit 7 [UDP-forming] OS Arabidopsis thaliana GN CESA7 PE 1 SV 1
blastp_uniprot_sprot sp|Q7XUU0|CSLH3_ORYSJ 15 375 + 361 Gaps:153 60.86 792 26.97 6e-35 Putative cellulose synthase-like protein H3 OS Oryza sativa subsp. japonica GN CSLH3 PE 3 SV 3
rpsblast_cdd gnl|CDD|178481 7 446 + 440 Gaps:100 73.57 734 55.93 0.0 PLN02893 PLN02893 Cellulose synthase-like protein.
rpsblast_cdd gnl|CDD|177841 12 445 + 434 Gaps:193 55.67 1040 27.98 2e-46 PLN02189 PLN02189 cellulose synthase.
rpsblast_cdd gnl|CDD|177842 12 340 + 329 Gaps:158 58.60 756 27.09 3e-34 PLN02190 PLN02190 cellulose synthase-like protein.
rpsblast_cdd gnl|CDD|146277 51 439 + 389 Gaps:106 64.25 716 32.61 5e-33 pfam03552 Cellulose_synt Cellulose synthase. Cellulose an aggregate of unbranched polymers of beta-1 4-linked glucose residues is the major component of wood and thus paper and is synthesised by plants most algae some bacteria and fungi and even some animals. The genes that synthesise cellulose in higher plants differ greatly from the well-characterized genes found in Acetobacter and Agrobacterium sp. More correctly designated as 'cellulose synthase catalytic subunits' plant cellulose synthase (CesA) proteins are integral membrane proteins approximately 1 000 amino acids in length. There are a number of highly conserved residues including several motifs shown to be necessary for processive glycosyltransferase activity.
rpsblast_cdd gnl|CDD|178503 45 445 + 401 Gaps:97 44.44 1044 31.68 8e-33 PLN02915 PLN02915 cellulose synthase A [UDP-forming] catalytic subunit.
rpsblast_cdd gnl|CDD|178244 12 445 + 434 Gaps:109 47.64 1079 32.49 9e-33 PLN02638 PLN02638 cellulose synthase A (UDP-forming) catalytic subunit.
rpsblast_cdd gnl|CDD|178055 52 445 + 394 Gaps:105 43.69 1094 31.59 3e-32 PLN02436 PLN02436 cellulose synthase A.
rpsblast_cdd gnl|CDD|177846 45 445 + 401 Gaps:105 49.13 977 31.87 2e-31 PLN02195 PLN02195 cellulose synthase A.
rpsblast_cdd gnl|CDD|178022 45 445 + 401 Gaps:109 45.16 1085 31.43 3e-30 PLN02400 PLN02400 cellulose synthase.
rpsblast_cdd gnl|CDD|177890 50 297 + 248 Gaps:57 25.37 1135 34.72 4e-24 PLN02248 PLN02248 cellulose synthase-like protein.

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 240 262 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 165 301 137 PF03552 none Cellulose synthase IPR005150
Pfam 101 157 57 PF03552 none Cellulose synthase IPR005150
Pfam 11 100 90 PF03552 none Cellulose synthase IPR005150
Phobius 411 421 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 329 360 32 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 239 239 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 361 380 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 310 328 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 263 267 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 392 410 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 446 447 2 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 51 303 253 PTHR13301 none none none
Phobius 422 445 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 290 309 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 268 289 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 381 391 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 51 303 253 PTHR13301:SF27 none none none

6 Localization

Analysis Start End Length
TMHMM 391 413 22
TMHMM 362 384 22
TMHMM 277 299 22
TMHMM 423 445 22
TMHMM 311 333 22
TMHMM 240 262 22

19 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

0 Targeting