Protein : Qrob_P0373090.2 Q. robur
Protein Identifier  ? Qrob_P0373090.2 Organism . Name  Quercus robur
Score  87.2 Score Type  egn
Protein Description  (M=1) KOG0498//KOG0500//KOG0501 - K+-channel ERG and related proteins contain PAS/PAC sensor domain [Inorganic ion transport and metabolism Signal transduction mechanisms]. // Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism Signal transduction mechanisms]. // K+-channel KCNQ [Inorganic ion transport and metabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 633  
Kegg Orthology  K05391
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0005216 ion channel activity Enables the facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. May be either selective (it enables passage of a specific ion only) or non-selective (it enables passage of two or more ions of same charge but different size).
GO:0006811 ion transport The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_022171 1 632 + 632 Gaps:75 97.61 712 63.60 0.0 Cyclic nucleotide-gated channel 15 isoform 1
blastp_kegg lcl|vvi:100244894 1 632 + 632 Gaps:80 97.70 696 61.47 0.0 putative cyclic nucleotide-gated ion channel 15-like
blastp_kegg lcl|cit:102622071 1 632 + 632 Gaps:69 97.61 710 58.87 0.0 putative cyclic nucleotide-gated ion channel 15-like
blastp_kegg lcl|cic:CICLE_v10011188mg 1 632 + 632 Gaps:69 97.61 710 58.73 0.0 hypothetical protein
blastp_kegg lcl|gmx:100815543 1 632 + 632 Gaps:81 97.74 707 61.07 0.0 putative cyclic nucleotide-gated ion channel 15-like
blastp_kegg lcl|gmx:100804375 1 632 + 632 Gaps:76 97.44 704 60.06 0.0 putative cyclic nucleotide-gated ion channel 15-like
blastp_kegg lcl|cam:101506519 1 629 + 629 Gaps:82 97.19 711 59.33 0.0 putative cyclic nucleotide-gated ion channel 15-like
blastp_kegg lcl|sot:102583901 1 617 + 617 Gaps:70 95.63 710 57.88 0.0 putative cyclic nucleotide-gated ion channel 15-like
blastp_kegg lcl|pvu:PHAVU_007G148700g 8 632 + 625 Gaps:76 91.88 739 59.94 0.0 hypothetical protein
blastp_kegg lcl|sly:101249432 1 624 + 624 Gaps:78 96.46 707 58.80 0.0 putative cyclic nucleotide-gated ion channel 15-like
blastp_pdb 1wgp_A 453 537 + 85 Gaps:22 78.10 137 57.01 1e-28 mol:protein length:137 Probable cyclic nucleotide-gated ion channel
blastp_uniprot_sprot sp|Q9SL29|CNG15_ARATH 1 620 + 620 Gaps:95 96.31 678 58.19 0.0 Putative cyclic nucleotide-gated ion channel 15 OS Arabidopsis thaliana GN CNGC15 PE 3 SV 1
blastp_uniprot_sprot sp|O82226|CNGC6_ARATH 46 624 + 579 Gaps:88 86.88 747 45.92 0.0 Probable cyclic nucleotide-gated ion channel 6 OS Arabidopsis thaliana GN CNGC6 PE 1 SV 2
blastp_uniprot_sprot sp|Q9M0A4|CNGC9_ARATH 46 583 + 538 Gaps:80 83.22 733 47.70 0.0 Putative cyclic nucleotide-gated ion channel 9 OS Arabidopsis thaliana GN CNGC9 PE 1 SV 1
blastp_uniprot_sprot sp|Q8RWS9|CNGC5_ARATH 6 620 + 615 Gaps:98 93.58 717 45.60 4e-179 Probable cyclic nucleotide-gated ion channel 5 OS Arabidopsis thaliana GN CNGC5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FXH6|CNGC8_ARATH 32 582 + 551 Gaps:83 82.07 753 47.25 4e-175 Putative cyclic nucleotide-gated ion channel 8 OS Arabidopsis thaliana GN CNGC8 PE 3 SV 2
blastp_uniprot_sprot sp|Q9S9N5|CNGC7_ARATH 54 581 + 528 Gaps:85 80.89 738 47.57 5e-174 Putative cyclic nucleotide-gated ion channel 7 OS Arabidopsis thaliana GN CNGC7 PE 3 SV 1
blastp_uniprot_sprot sp|Q9SJA4|CNG14_ARATH 64 598 + 535 Gaps:83 83.47 726 47.19 3e-170 Probable cyclic nucleotide-gated ion channel 14 OS Arabidopsis thaliana GN CNGC14 PE 2 SV 2
blastp_uniprot_sprot sp|Q8L7Z0|CNG17_ARATH 75 585 + 511 Gaps:79 80.28 720 46.37 2e-169 Probable cyclic nucleotide-gated ion channel 17 OS Arabidopsis thaliana GN CNGC17 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LD40|CNG13_ARATH 1 621 + 621 Gaps:98 96.70 696 43.24 2e-169 Putative cyclic nucleotide-gated ion channel 13 OS Arabidopsis thaliana GN CNGC13 PE 3 SV 2
blastp_uniprot_sprot sp|O65717|CNGC1_ARATH 77 625 + 549 Gaps:71 84.92 716 46.22 8e-168 Cyclic nucleotide-gated ion channel 1 OS Arabidopsis thaliana GN CNGC1 PE 1 SV 1
rpsblast_kog gnl|CDD|35719 1 626 + 626 Gaps:104 84.73 727 38.31 1e-138 KOG0498 KOG0498 KOG0498 K+-channel ERG and related proteins contain PAS/PAC sensor domain [Inorganic ion transport and metabolism Signal transduction mechanisms].
rpsblast_kog gnl|CDD|35721 130 482 + 353 Gaps:97 60.07 536 27.33 4e-14 KOG0500 KOG0500 KOG0500 Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism Signal transduction mechanisms].
rpsblast_kog gnl|CDD|35722 119 482 + 364 Gaps:64 36.46 971 22.88 1e-12 KOG0501 KOG0501 KOG0501 K+-channel KCNQ [Inorganic ion transport and metabolism].

24 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 359 388 30 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 180 199 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 62 286 225 PTHR10217 none none none
PANTHER 324 584 261 PTHR10217 none none none
Pfam 131 380 250 PF00520 none Ion transport protein IPR005821
Phobius 389 632 244 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 231 250 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 91 109 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 88 276 189 G3DSA:1.10.287.70 none none none
Gene3D 325 384 60 G3DSA:1.10.287.70 none none none
Phobius 110 128 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 397 540 144 SSF51206 none none IPR018490
Phobius 1 90 90 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 251 272 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 62 286 225 PTHR10217:SF486 none none none
PANTHER 324 584 261 PTHR10217:SF486 none none none
Gene3D 488 537 50 G3DSA:2.60.120.10 none none IPR014710
Phobius 148 179 32 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 325 384 60 SSF81324 none none none
SUPERFAMILY 79 270 192 SSF81324 none none none
Phobius 211 230 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 273 358 86 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 200 210 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 129 147 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

5 Localization

Analysis Start End Length
TMHMM 91 111 20
TMHMM 251 273 22
TMHMM 355 377 22
TMHMM 212 231 19
TMHMM 126 145 19

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting