Protein : Qrob_P0372550.2 Q. robur
Protein Identifier  ? Qrob_P0372550.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=9) K05765 - cofilin Gene Prediction Quality  validated
Protein length 

Sequence

Length: 141  
Kegg Orthology  K05765
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0015629 actin cytoskeleton The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
GO:0003779 actin binding Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments.
GO:0030042 actin filament depolymerization Disassembly of actin filaments by the removal of actin monomers from a filament.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103482576 9 129 + 121 Gaps:9 91.97 137 64.29 3e-43 actin-depolymerizing factor 7
blastp_kegg lcl|pop:POPTR_0015s13080g 9 129 + 121 Gaps:9 91.97 137 62.70 3e-43 POPTRDRAFT_253928 hypothetical protein
blastp_kegg lcl|csv:101220871 9 129 + 121 Gaps:9 96.92 130 64.29 5e-43 actin-depolymerizing factor 7-like
blastp_kegg lcl|pvu:PHAVU_007G070500g 9 128 + 120 Gaps:9 90.58 138 62.40 2e-42 hypothetical protein
blastp_kegg lcl|tcc:TCM_015173 9 129 + 121 Gaps:9 91.97 137 61.11 3e-42 Actin depolymerizing factor 7
blastp_kegg lcl|pop:POPTR_0012s13150g 9 129 + 121 Gaps:9 91.97 137 61.11 3e-42 POPTRDRAFT_773389 actin-depolymerizing factor family protein
blastp_kegg lcl|brp:103857126 9 129 + 121 Gaps:9 91.97 137 60.32 3e-42 actin-depolymerizing factor 12-like
blastp_kegg lcl|cic:CICLE_v10023304mg 9 129 + 121 Gaps:11 91.43 140 62.50 4e-42 hypothetical protein
blastp_kegg lcl|pxb:103940883 9 129 + 121 Gaps:9 91.30 138 61.11 4e-42 actin-depolymerizing factor 7
blastp_kegg lcl|pxb:103934933 9 129 + 121 Gaps:9 91.30 138 61.11 4e-42 actin-depolymerizing factor 7
blastp_pdb 1f7s_A 9 128 + 120 Gaps:11 91.37 139 51.97 4e-35 mol:protein length:139 ACTIN DEPOLYMERIZING FACTOR (ADF)
blastp_pdb 1cnu_A 7 128 + 122 Gaps:12 93.43 137 32.81 4e-11 mol:protein length:137 ACTOPHORIN
blastp_pdb 1ahq_A 7 128 + 122 Gaps:12 93.43 137 32.81 4e-11 mol:protein length:137 ACTOPHORIN
blastp_pdb 1qpv_A 7 124 + 118 Gaps:11 87.41 143 33.60 4e-10 mol:protein length:143 YEAST COFILIN
blastp_pdb 1cof_A 7 124 + 118 Gaps:11 87.41 143 33.60 4e-10 mol:protein length:143 COFILIN
blastp_pdb 1cfy_B 7 124 + 118 Gaps:11 87.41 143 33.60 4e-10 mol:protein length:143 COFILIN
blastp_pdb 1cfy_A 7 124 + 118 Gaps:11 87.41 143 33.60 4e-10 mol:protein length:143 COFILIN
blastp_pdb 2l72_A 9 113 + 105 Gaps:15 71.94 139 36.00 8e-09 mol:protein length:139 Actin depolymerizing factor putative
blastp_pdb 2i2q_A 10 124 + 115 Gaps:11 87.59 137 29.17 5e-07 mol:protein length:137 Cofilin
blastp_uniprot_sprot sp|Q67ZM4|ADF7_ARATH 9 129 + 121 Gaps:9 91.97 137 61.11 2e-43 Actin-depolymerizing factor 7 OS Arabidopsis thaliana GN ADF7 PE 2 SV 1
blastp_uniprot_sprot sp|Q6EUH7|ADF1_ORYSJ 7 129 + 123 Gaps:11 93.53 139 58.46 5e-42 Actin-depolymerizing factor 1 OS Oryza sativa subsp. japonica GN ADF1 PE 2 SV 1
blastp_uniprot_sprot sp|P30175|ADF_LILLO 9 129 + 121 Gaps:11 92.09 139 56.25 1e-40 Actin-depolymerizing factor OS Lilium longiflorum PE 2 SV 1
blastp_uniprot_sprot sp|Q7XSN9|ADF6_ORYSJ 7 129 + 123 Gaps:11 93.53 139 57.69 3e-40 Actin-depolymerizing factor 6 OS Oryza sativa subsp. japonica GN ADF6 PE 2 SV 2
blastp_uniprot_sprot sp|Q8LFH6|ADF12_ARATH 9 129 + 121 Gaps:9 91.97 137 57.94 5e-40 Actin-depolymerizing factor 12 OS Arabidopsis thaliana GN ADF12 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LQ81|ADF10_ARATH 7 127 + 121 Gaps:11 91.43 140 57.03 3e-39 Actin-depolymerizing factor 10 OS Arabidopsis thaliana GN ADF10 PE 2 SV 1
blastp_uniprot_sprot sp|Q570Y6|ADF8_ARATH 9 127 + 119 Gaps:11 90.00 140 54.76 7e-38 Actin-depolymerizing factor 8 OS Arabidopsis thaliana GN ADF8 PE 2 SV 2
blastp_uniprot_sprot sp|Q8H2P8|ADF9_ORYSJ 9 128 + 120 Gaps:11 91.37 139 52.76 1e-37 Actin-depolymerizing factor 9 OS Oryza sativa subsp. japonica GN ADF9 PE 2 SV 1
blastp_uniprot_sprot sp|Q0DLA3|ADF7_ORYSJ 9 128 + 120 Gaps:11 91.37 139 53.54 2e-37 Actin-depolymerizing factor 7 OS Oryza sativa subsp. japonica GN ADF7 PE 3 SV 2
blastp_uniprot_sprot sp|Q39251|ADF2_ARATH 9 127 + 119 Gaps:9 90.51 137 53.23 1e-36 Actin-depolymerizing factor 2 OS Arabidopsis thaliana GN ADF2 PE 2 SV 1
rpsblast_cdd gnl|CDD|178755 6 128 + 123 Gaps:11 92.20 141 38.46 3e-22 PLN03216 PLN03216 actin depolymerizing factor Provisional.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 9 125 117 G3DSA:3.40.20.10 none none IPR029006
ProSiteProfiles 1 129 129 PS51263 none ADF-H domain profile. IPR002108
PANTHER 9 140 132 PTHR11913 none none IPR017904
SUPERFAMILY 9 126 118 SSF55753 none none none
SMART 9 129 121 SM00102 none Actin depolymerisation factor/cofilin -like domains IPR002108
PANTHER 9 140 132 PTHR11913:SF19 none none none
Pfam 9 125 117 PF00241 none Cofilin/tropomyosin-type actin-binding protein IPR002108

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2003_QTL13_peak_Bud_burst_A4 Qrob_Chr09 9 s_1AP8MN_635 s_1A3QQ_692 18,18 10,88 25,88 lod 3,4 7,2
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4

0 Targeting