Protein : Qrob_P0372260.2 Q. robur
Protein Identifier  ? Qrob_P0372260.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=1) PTHR22572//PTHR22572:SF85 - SUGAR-1-PHOSPHATE GUANYL TRANSFERASE // SUBFAMILY NOT NAMED Code Enzyme  EC:2.7.7.13
Gene Prediction Quality  validated Protein length 

Sequence

Length: 419  
Kegg Orthology  K00966
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0009058 biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO:0016779 nucleotidyltransferase activity Catalysis of the transfer of a nucleotidyl group to a reactant.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101314646 1 418 + 418 Gaps:3 100.00 415 87.95 0.0 mannose-1-phosphate guanyltransferase alpha-like
blastp_kegg lcl|tcc:TCM_017958 1 418 + 418 Gaps:5 100.00 417 87.29 0.0 ADP-glucose pyrophosphorylase family protein isoform 1
blastp_kegg lcl|cic:CICLE_v10015419mg 6 418 + 413 Gaps:3 99.76 411 88.78 0.0 hypothetical protein
blastp_kegg lcl|cit:102615470 6 418 + 413 Gaps:4 99.76 412 89.05 0.0 mannose-1-phosphate guanyltransferase alpha-like
blastp_kegg lcl|vvi:100255999 1 418 + 418 Gaps:3 100.00 415 86.75 0.0 mannose-1-phosphate guanyltransferase alpha-like
blastp_kegg lcl|mtr:MTR_6g008840 4 418 + 415 Gaps:4 99.52 421 86.63 0.0 Mannose-1-phosphate guanyltransferase alpha-B
blastp_kegg lcl|pmum:103338287 1 418 + 418 Gaps:3 100.00 415 84.58 0.0 mannose-1-phosphate guanyltransferase alpha
blastp_kegg lcl|pper:PRUPE_ppa006436mg 5 418 + 414 Gaps:3 99.76 412 89.29 0.0 hypothetical protein
blastp_kegg lcl|cmo:103487048 1 418 + 418 Gaps:4 100.00 414 86.23 0.0 mannose-1-phosphate guanyltransferase alpha
blastp_kegg lcl|pmum:103329929 5 418 + 414 Gaps:3 99.76 412 89.29 0.0 mannose-1-phosphate guanyltransferase alpha
blastp_pdb 4ecm_A 10 200 + 191 Gaps:10 67.29 269 24.31 5e-06 mol:protein length:269 Glucose-1-phosphate thymidylyltransferase
blastp_pdb 3hl3_A 10 200 + 191 Gaps:10 67.29 269 24.31 5e-06 mol:protein length:269 Glucose-1-phosphate thymidylyltransferase
blastp_uniprot_sprot sp|Q86HG0|GMPPA_DICDI 1 418 + 418 Gaps:16 100.00 412 45.15 1e-122 Mannose-1-phosphate guanyltransferase alpha OS Dictyostelium discoideum GN gmppA PE 2 SV 1
blastp_uniprot_sprot sp|Q7SXP8|GMPAB_DANRE 10 418 + 409 Gaps:28 99.29 422 45.11 2e-122 Mannose-1-phosphate guanyltransferase alpha-B OS Danio rerio GN gmppab PE 2 SV 1
blastp_uniprot_sprot sp|Q6GMK8|GMPAA_DANRE 10 418 + 409 Gaps:36 99.29 422 44.87 3e-122 Mannose-1-phosphate guanyltransferase alpha-A OS Danio rerio GN gmppaa PE 2 SV 1
blastp_uniprot_sprot sp|Q0VFM6|GMPPA_XENTR 10 418 + 409 Gaps:33 99.29 421 45.22 1e-121 Mannose-1-phosphate guanyltransferase alpha OS Xenopus tropicalis GN gmppa PE 2 SV 1
blastp_uniprot_sprot sp|Q6DKE9|GMPAA_XENLA 10 418 + 409 Gaps:33 99.29 421 44.98 8e-119 Mannose-1-phosphate guanyltransferase alpha-A OS Xenopus laevis GN gmppa-a PE 2 SV 1
blastp_uniprot_sprot sp|Q66KG5|GMPAB_XENLA 10 418 + 409 Gaps:28 99.30 426 44.44 1e-118 Mannose-1-phosphate guanyltransferase alpha-B OS Xenopus laevis GN gmppa-b PE 2 SV 1
blastp_uniprot_sprot sp|Q96IJ6|GMPPA_HUMAN 10 418 + 409 Gaps:34 99.29 420 44.84 9e-117 Mannose-1-phosphate guanyltransferase alpha OS Homo sapiens GN GMPPA PE 1 SV 1
blastp_uniprot_sprot sp|Q922H4|GMPPA_MOUSE 10 418 + 409 Gaps:28 99.29 420 44.12 1e-116 Mannose-1-phosphate guanyltransferase alpha OS Mus musculus GN Gmppa PE 2 SV 1
blastp_uniprot_sprot sp|B0CM52|GMPPA_PAPAN 10 418 + 409 Gaps:26 99.29 420 44.36 2e-116 Mannose-1-phosphate guanyltransferase alpha OS Papio anubis GN GMPPA PE 3 SV 1
blastp_uniprot_sprot sp|I3LUP1|GMPPA_PIG 10 418 + 409 Gaps:26 99.29 420 43.88 6e-115 Mannose-1-phosphate guanyltransferase alpha OS Sus scrofa GN GMPPA PE 1 SV 2
rpsblast_cdd gnl|CDD|133050 10 274 + 265 Gaps:8 100.00 257 54.09 1e-119 cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase. N-terminal domain of the M1P-guanylyltransferase A-isoform like proteins: The proteins of this family are likely to be a isoform of GDP-mannose pyrophosphorylase. Their sequences are highly conserved with mannose-1-phosphate guanyltransferase but generally about 40-60 bases longer. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity morphogenesis and viability. Repression of GDP-mannose pyrophosphorylase in yeast leads to phenotypes including cell lysis defective cell wall and failure of polarized growth and cell separation.
rpsblast_cdd gnl|CDD|31401 10 397 + 388 Gaps:41 99.16 358 30.70 7e-49 COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis outer membrane / Translation ribosomal structure and biogenesis].
rpsblast_cdd gnl|CDD|133047 10 275 + 266 Gaps:35 99.14 233 36.80 2e-39 cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins. GDP-mannose pyrophosphorylase (GTP: alpha-d-mannose-1-phosphate guanyltransferase) catalyzes the formation of GDP-d-mannose from GTP and alpha-d-mannose-1-Phosphate. It contains an N-terminal catalytic domain and a C-terminal Lefthanded-beta-Helix fold domain. GDP-d-mannose is the activated form of mannose for formation of cell wall lipoarabinomannan and various mannose-containing glycolipids and polysaccharides. The function of GDP-mannose pyrophosphorylase is essential for cell wall integrity morphogenesis and viability. Repression of GDP-mannose pyrophosphorylase in yeast leads to phenotypes such as cell lysis defective cell wall and failure of polarized growth and cell separation.
rpsblast_cdd gnl|CDD|133024 10 261 + 252 Gaps:36 99.54 217 31.94 1e-37 cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars. Nucleotidyltransferases transfer nucleotides onto phosphosugars. The enzyme family includes Alpha-D-Glucose-1-Phosphate Cytidylyltransferase Mannose-1-phosphate guanyltransferase and Glucose-1-phosphate thymidylyltransferase. The products are activated sugars that are precursors for synthesis of lipopolysaccharide glycolipids and polysaccharides.
rpsblast_cdd gnl|CDD|188507 10 362 + 353 Gaps:67 82.95 393 28.83 5e-26 TIGR03992 Arch_glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. The MJ_1101 protein from Methanococcus jannaschii has been characterized as the GlmU enzyme catalyzing the final two steps of UDP-GlcNAc biosynthesis. Many of the genes identified by this model are in proximity to the GlmS and GlmM genes and are also presumed to be GlmU. However some archaeal genomes contain multiple closely-related homologs from this family and it is not clear what the substrate specificity is for each of them.
rpsblast_cdd gnl|CDD|144176 10 196 + 187 Gaps:10 74.90 247 23.78 2e-22 pfam00483 NTP_transferase Nucleotidyl transferase. This family includes a wide range of enzymes which transfer nucleotides onto phosphosugars.
rpsblast_cdd gnl|CDD|133032 10 200 + 191 Gaps:11 76.27 236 29.44 6e-20 cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase. This family is the long form of Glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae short form and long form. The long form which has an extra 50 amino acids c-terminal is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other unknown pathways and in which dTDP-L-rhamnose is not necessarily produced.The long from enzymes also have a left-handed parallel helix domain at the c-terminus whereas th eshort form enzymes do not have this domain. The homotetrameric feedback inhibited short form is found in numerous bacterial species that produce dTDP-L-rhamnose.
rpsblast_cdd gnl|CDD|133065 10 254 + 245 Gaps:67 92.38 223 29.61 1e-19 cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases. WcbM protein of Burkholderia mallei is involved in the biosynthesis export or translocation of capsule. It is a subfamily of nucleotidyl transferases that transfer nucleotides onto phosphosugars.

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 229 415 187 PTHR22572 none none none
PANTHER 1 204 204 PTHR22572 none none none
Gene3D 293 400 108 G3DSA:2.160.10.10 none none none
SUPERFAMILY 8 209 202 SSF53448 none none IPR029044
SUPERFAMILY 236 357 122 SSF53448 none none IPR029044
Pfam 300 328 29 PF00132 none Bacterial transferase hexapeptide (six repeats) IPR001451
Pfam 10 200 191 PF00483 "Reactome:REACT_17015" Nucleotidyl transferase IPR005835
PANTHER 229 415 187 PTHR22572:SF85 none none none
PANTHER 1 204 204 PTHR22572:SF85 none none none
Gene3D 9 276 268 G3DSA:3.90.550.10 none none IPR029044

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting