Protein : Qrob_P0370990.2 Q. robur
Protein Identifier  ? Qrob_P0370990.2 Organism . Name  Quercus robur
Protein Description  (M=2) PTHR10438:SF245 - THIOREDOXIN-LIKE 1-1, CHLOROPLASTIC-RELATED (PTHR10438:SF245) Alias (in v1)  Qrob_P0482110.1
Code Enzyme  EC:1.6.5.4 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 296  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0015035 protein disulfide oxidoreductase activity Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
GO:0045454 cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.
GO:0006662 glycerol ether metabolic process The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10021469mg 2 295 + 294 Gaps:18 99.31 290 75.00 2e-140 hypothetical protein
blastp_kegg lcl|cit:102607742 2 295 + 294 Gaps:18 99.31 290 75.00 2e-140 thioredoxin-like 1-1 chloroplastic-like
blastp_kegg lcl|pmum:103338948 2 295 + 294 Gaps:13 99.32 295 71.67 2e-139 thioredoxin-like 1-1 chloroplastic
blastp_kegg lcl|pop:POPTR_0019s04750g 2 295 + 294 Gaps:19 99.32 295 70.31 2e-139 POPTRDRAFT_738413 thioredoxin-like 7 family protein
blastp_kegg lcl|pper:PRUPE_ppa009372mg 2 295 + 294 Gaps:12 99.32 294 71.58 4e-139 hypothetical protein
blastp_kegg lcl|pop:POPTR_0013s05790g 2 295 + 294 Gaps:26 99.34 304 69.87 4e-137 POPTRDRAFT_730026 thioredoxin-like 7 family protein
blastp_kegg lcl|rcu:RCOM_1122190 2 295 + 294 Gaps:12 99.32 296 70.41 9e-136 Thioredoxin putative
blastp_kegg lcl|tcc:TCM_026024 2 295 + 294 Gaps:14 99.32 294 69.86 3e-132 Atypical CYS HIS rich thioredoxin 4
blastp_kegg lcl|cam:101501672 2 295 + 294 Gaps:11 99.33 297 66.44 5e-130 thioredoxin-like 1-1 chloroplastic-like
blastp_kegg lcl|gmx:100816892 2 295 + 294 Gaps:17 99.33 299 67.68 3e-129 thioredoxin-like 1-1 chloroplastic-like
blastp_pdb 2hsy_A 115 184 + 70 none 67.31 104 41.43 6e-12 mol:protein length:104 Thioredoxin II
blastp_pdb 2fa4_B 115 184 + 70 none 63.06 111 41.43 7e-12 mol:protein length:111 Thioredoxin II
blastp_pdb 2fa4_A 115 184 + 70 none 63.06 111 41.43 7e-12 mol:protein length:111 Thioredoxin II
blastp_pdb 3pin_A 115 184 + 70 none 67.31 104 40.00 1e-10 mol:protein length:104 Thioredoxin-2
blastp_pdb 4dss_B 115 184 + 70 none 62.50 112 40.00 1e-10 mol:protein length:112 Thioredoxin-2
blastp_pdb 2vim_A 104 209 + 106 Gaps:5 99.04 104 31.07 1e-09 mol:protein length:104 THIOREDOXIN
blastp_pdb 1trw_A 104 196 + 93 Gaps:1 87.62 105 30.43 1e-08 mol:protein length:105 THIOREDOXIN
blastp_pdb 1trv_A 104 196 + 93 Gaps:1 87.62 105 30.43 1e-08 mol:protein length:105 THIOREDOXIN
blastp_pdb 1tru_A 104 196 + 93 Gaps:1 87.62 105 30.43 1e-08 mol:protein length:105 THIOREDOXIN
blastp_pdb 1trs_A 104 196 + 93 Gaps:1 87.62 105 30.43 1e-08 mol:protein length:105 THIOREDOXIN
blastp_uniprot_sprot sp|O64654|TRL11_ARATH 2 295 + 294 Gaps:27 99.27 275 69.60 9e-118 Thioredoxin-like 1-1 chloroplastic OS Arabidopsis thaliana GN At1g08570 PE 2 SV 1
blastp_uniprot_sprot sp|Q10M18|TRL12_ORYSJ 54 295 + 242 Gaps:18 82.44 279 65.65 1e-99 Thioredoxin-like 1-2 chloroplastic OS Oryza sativa subsp. japonica GN Os03g0326500 PE 2 SV 1
blastp_uniprot_sprot sp|Q6Z4N3|TRL11_ORYSJ 52 295 + 244 Gaps:10 83.87 279 61.97 1e-93 Thioredoxin-like 1-1 chloroplastic OS Oryza sativa subsp. japonica GN Os07g0684100 PE 2 SV 1
blastp_uniprot_sprot sp|O22779|TRL13_ARATH 33 242 + 210 Gaps:17 74.36 273 64.04 3e-85 Thioredoxin-like 1-3 chloroplastic OS Arabidopsis thaliana GN At2g33270 PE 2 SV 1
blastp_uniprot_sprot sp|Q9XFI1|TRL12_ARATH 21 239 + 219 Gaps:15 85.71 245 56.19 4e-70 Thioredoxin-like 1-2 chloroplastic OS Arabidopsis thaliana GN At5g61440 PE 2 SV 1
blastp_uniprot_sprot sp|Q5TKD8|TRL2_ORYSJ 94 222 + 129 none 59.72 216 51.94 4e-45 Thioredoxin-like 2 chloroplastic OS Oryza sativa subsp. japonica GN Os05g0200100 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LEK4|TRL21_ARATH 31 209 + 179 Gaps:8 83.71 221 39.46 1e-40 Thioredoxin-like 2-1 chloroplastic OS Arabidopsis thaliana GN At4g26160 PE 2 SV 2
blastp_uniprot_sprot sp|Q8LCT3|TRL22_ARATH 94 201 + 108 Gaps:1 45.34 236 51.40 2e-33 Thioredoxin-like 2-2 chloroplastic OS Arabidopsis thaliana GN At4g29670 PE 2 SV 2
blastp_uniprot_sprot sp|P22803|TRX2_YEAST 115 184 + 70 none 67.31 104 41.43 2e-11 Thioredoxin-2 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN TRX2 PE 1 SV 3
blastp_uniprot_sprot sp|O96952|THIO_GEOCY 116 187 + 72 none 67.92 106 34.72 2e-10 Thioredoxin OS Geodia cydonium GN THIO PE 3 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 47 243 197 PTHR10438:SF245 none none none
PANTHER 47 243 197 PTHR10438 none none IPR005746
Pfam 114 185 72 PF00085 none Thioredoxin IPR013766
SUPERFAMILY 93 209 117 SSF52833 none none IPR012336
ProSiteProfiles 95 211 117 PS51352 none Thioredoxin domain profile. IPR012336
Gene3D 94 209 116 G3DSA:3.40.30.10 none none IPR012336

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8
Bourran2_2014_nPriLBD*_A4 Qrob_Chr07 7 s_1C6BY7_802 s_1BPEBU_1211 7,15 0 16,34 lod 3,9419 10,2

0 Targeting