Protein : Qrob_P0365810.2 Q. robur
Protein Identifier  ? Qrob_P0365810.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=2) PTHR22572//PTHR22572:SF79 - SUGAR-1-PHOSPHATE GUANYL TRANSFERASE // SUBFAMILY NOT NAMED (PTHR22572:SF79) Code Enzyme  EC:2.7.7.27
Gene Prediction Quality  validated Protein length 

Sequence

Length: 504  
Kegg Orthology  K00975
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0009058 biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO:0016779 nucleotidyltransferase activity Catalysis of the transfer of a nucleotidyl group to a reactant.
GO:0005978 glycogen biosynthetic process The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues.
GO:0008878 glucose-1-phosphate adenylyltransferase activity Catalysis of the reaction: alpha-D-glucose 1-phosphate + ATP = ADP-glucose + diphosphate.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100790187 1 499 + 499 Gaps:20 93.01 515 91.23 0.0 glucose-1-phosphate adenylyltransferase small subunit 2 chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10014741mg 1 501 + 501 Gaps:15 85.56 568 89.09 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1212050 1 499 + 499 Gaps:18 93.09 521 90.31 0.0 glucose-1-phosphate adenylyltransferase putative (EC:2.7.7.27)
blastp_kegg lcl|gmx:100799431 1 499 + 499 Gaps:20 93.01 515 89.14 0.0 glucose-1-phosphate adenylyltransferase small subunit 2 chloroplastic-like
blastp_kegg lcl|cit:102625409 1 499 + 499 Gaps:15 93.08 520 89.05 0.0 SB1 glgC glucose-1-phosphate adenylyltransferase small subunit 2 chloroplastic-like
blastp_kegg lcl|vvi:100240927 1 499 + 499 Gaps:26 92.93 509 90.27 0.0 glucose-1-phosphate adenylyltransferase small subunit chloroplastic-like
blastp_kegg lcl|mtr:MTR_3g082150 1 499 + 499 Gaps:21 93.00 514 91.21 0.0 Glucose-1-phosphate adenylyltransferase
blastp_kegg lcl|csv:101216573 2 499 + 498 Gaps:15 92.71 521 87.99 0.0 glucose-1-phosphate adenylyltransferase small subunit chloroplastic-like
blastp_kegg lcl|pmum:103329110 2 499 + 498 Gaps:13 92.56 524 88.04 0.0 glucose-1-phosphate adenylyltransferase small subunit chloroplastic/amyloplastic
blastp_kegg lcl|pop:POPTR_0014s16990g 1 499 + 499 Gaps:13 93.10 522 89.51 0.0 POPTRDRAFT_573143 hypothetical protein
blastp_pdb 1yp4_D 86 499 + 414 none 91.80 451 94.20 0.0 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_pdb 1yp4_C 86 499 + 414 none 91.80 451 94.20 0.0 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_pdb 1yp4_B 86 499 + 414 none 91.80 451 94.20 0.0 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_pdb 1yp4_A 86 499 + 414 none 91.80 451 94.20 0.0 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_pdb 1yp3_D 86 499 + 414 none 91.80 451 94.20 0.0 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_pdb 1yp3_C 86 499 + 414 none 91.80 451 94.20 0.0 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_pdb 1yp3_B 86 499 + 414 none 91.80 451 94.20 0.0 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_pdb 1yp3_A 86 499 + 414 none 91.80 451 94.20 0.0 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_pdb 1yp2_D 86 499 + 414 none 91.80 451 94.20 0.0 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_pdb 1yp2_C 86 499 + 414 none 91.80 451 94.20 0.0 mol:protein length:451 Glucose-1-phosphate adenylyltransferase small
blastp_uniprot_sprot sp|Q9M462|GLGS_BRANA 1 499 + 499 Gaps:27 93.08 520 87.19 0.0 Glucose-1-phosphate adenylyltransferase small subunit chloroplastic OS Brassica napus GN AGPS1 PE 2 SV 1
blastp_uniprot_sprot sp|P55228|GLGS_ARATH 1 499 + 499 Gaps:25 93.08 520 85.54 0.0 Glucose-1-phosphate adenylyltransferase small subunit chloroplastic OS Arabidopsis thaliana GN APS1 PE 2 SV 2
blastp_uniprot_sprot sp|P52417|GLGS2_VICFA 4 499 + 496 Gaps:20 92.97 512 89.50 0.0 Glucose-1-phosphate adenylyltransferase small subunit 2 chloroplastic OS Vicia faba GN AGPP PE 2 SV 1
blastp_uniprot_sprot sp|P23509|GLGS_SOLTU 5 499 + 495 Gaps:12 92.71 521 85.92 0.0 Glucose-1-phosphate adenylyltransferase small subunit chloroplastic/amyloplastic OS Solanum tuberosum PE 1 SV 2
blastp_uniprot_sprot sp|P52416|GLGS1_VICFA 81 499 + 419 none 82.48 508 94.51 0.0 Glucose-1-phosphate adenylyltransferase small subunit 1 chloroplastic OS Vicia faba GN AGPC PE 2 SV 1
blastp_uniprot_sprot sp|Q42882|GLGS_SOLLC 5 499 + 495 Gaps:12 92.71 521 85.30 0.0 Glucose-1-phosphate adenylyltransferase small subunit chloroplastic OS Solanum lycopersicum PE 2 SV 1
blastp_uniprot_sprot sp|P55232|GLGS_BETVU 64 499 + 436 Gaps:16 85.89 489 93.33 0.0 Glucose-1-phosphate adenylyltransferase small subunit chloroplastic/amyloplastic (Fragment) OS Beta vulgaris GN AGPB1 PE 2 SV 1
blastp_uniprot_sprot sp|P15280|GLGS_ORYSJ 76 499 + 424 none 82.49 514 90.80 0.0 Glucose-1-phosphate adenylyltransferase small subunit chloroplastic/amyloplastic OS Oryza sativa subsp. japonica GN AGPS PE 2 SV 4
blastp_uniprot_sprot sp|P55238|GLGS_HORVU 77 499 + 423 none 82.46 513 90.54 0.0 Glucose-1-phosphate adenylyltransferase small subunit chloroplastic/amyloplastic OS Hordeum vulgare PE 2 SV 1
blastp_uniprot_sprot sp|P30523|GLGS_WHEAT 90 499 + 410 none 86.68 473 89.27 0.0 Glucose-1-phosphate adenylyltransferase small subunit chloroplastic/amyloplastic OS Triticum aestivum GN AGP-S PE 2 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 88 286 199 PTHR22572 none none none
Gene3D 107 451 345 G3DSA:3.90.550.10 none none IPR029044
SUPERFAMILY 480 496 17 SSF53448 none none IPR029044
SUPERFAMILY 104 382 279 SSF53448 none none IPR029044
ProSitePatterns 111 130 20 PS00808 "KEGG:00500+2.7.7.27","KEGG:00520+2.7.7.27","MetaCyc:PWY-622","UniPathway:UPA00164" ADP-glucose pyrophosphorylase signature 1. IPR005836
SUPERFAMILY 398 499 102 SSF51161 none none IPR011004
ProSitePatterns 200 208 9 PS00809 "KEGG:00500+2.7.7.27","KEGG:00520+2.7.7.27","MetaCyc:PWY-622","UniPathway:UPA00164" ADP-glucose pyrophosphorylase signature 2. IPR005836
PANTHER 308 499 192 PTHR22572 none none none
PANTHER 308 499 192 PTHR22572:SF79 none none none
PANTHER 88 286 199 PTHR22572:SF79 none none none
ProSitePatterns 312 322 11 PS00810 "KEGG:00500+2.7.7.27","KEGG:00520+2.7.7.27","MetaCyc:PWY-622","UniPathway:UPA00164" ADP-glucose pyrophosphorylase signature 3. IPR005836
Pfam 107 380 274 PF00483 "Reactome:REACT_17015" Nucleotidyl transferase IPR005835
TIGRFAM 105 498 394 TIGR02091 "KEGG:00500+2.7.7.27","KEGG:00520+2.7.7.27","MetaCyc:PWY-622","UniPathway:UPA00164" glgC: glucose-1-phosphate adenylyltransferase IPR011831

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 18 17

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4

0 Targeting