Protein : Qrob_P0365440.2 Q. robur
Protein Identifier  ? Qrob_P0365440.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=6) 1.3.3.3 - Coproporphyrinogen oxidase. Code Enzyme  EC:1.3.3.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 195  
Kegg Orthology  K00228
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0006779 porphyrin-containing compound biosynthetic process The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group.
GO:0004109 coproporphyrinogen oxidase activity Catalysis of the reaction: coproporphyrinogen III + 2 H(+) + O(2) = 2 CO(2) + 2 H(2)O + protoporphyrinogen IX.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10011903mg 3 190 + 188 Gaps:12 45.57 395 68.33 1e-58 hypothetical protein
blastp_kegg lcl|cit:102614806 3 190 + 188 Gaps:12 45.57 395 68.33 3e-58 coproporphyrinogen-III oxidase chloroplastic-like
blastp_kegg lcl|eus:EUTSA_v10007888mg 52 190 + 139 Gaps:5 35.14 387 73.53 2e-57 hypothetical protein
blastp_kegg lcl|vvi:100243271 16 190 + 175 Gaps:18 45.14 401 59.12 2e-56 coproporphyrinogen-III oxidase chloroplastic-like
blastp_kegg lcl|cam:101494025 11 190 + 180 Gaps:26 45.73 398 59.89 2e-56 coproporphyrinogen-III oxidase chloroplastic-like
blastp_kegg lcl|ath:AT4G03205 12 190 + 179 Gaps:17 73.82 233 60.47 3e-56 hemf2 coproporphyrinogen III oxidase 2
blastp_kegg lcl|crb:CARUB_v10003781mg 60 190 + 131 Gaps:6 37.80 336 74.80 4e-56 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_008G289900g 58 190 + 133 Gaps:8 32.56 390 74.02 1e-55 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0902640 23 190 + 168 Gaps:15 39.44 393 67.10 5e-55 coproporphyrinogen III oxidase putative (EC:1.3.3.3)
blastp_kegg lcl|gmx:100818277 60 190 + 131 Gaps:8 32.47 385 72.80 1e-53 coproporphyrinogen-III oxidase chloroplastic-like
blastp_pdb 2aex_A 99 190 + 92 Gaps:3 27.46 346 44.21 1e-17 mol:protein length:346 Coproporphyrinogen III oxidase mitochondrial
blastp_pdb 1tk1_A 99 176 + 78 Gaps:2 30.00 260 44.87 6e-13 mol:protein length:260 Coproporphyrinogen III oxidase
blastp_pdb 1txn_B 89 176 + 88 Gaps:2 26.83 328 40.91 7e-13 mol:protein length:328 Coproporphyrinogen III oxidase
blastp_pdb 1txn_A 89 176 + 88 Gaps:2 26.83 328 40.91 7e-13 mol:protein length:328 Coproporphyrinogen III oxidase
blastp_pdb 1tlb_W 99 176 + 78 Gaps:2 23.93 326 44.87 1e-12 mol:protein length:326 Coproporphyrinogen III oxidase
blastp_pdb 1tlb_U 99 176 + 78 Gaps:2 23.93 326 44.87 1e-12 mol:protein length:326 Coproporphyrinogen III oxidase
blastp_pdb 1tlb_S 99 176 + 78 Gaps:2 23.93 326 44.87 1e-12 mol:protein length:326 Coproporphyrinogen III oxidase
blastp_pdb 1tlb_Q 99 176 + 78 Gaps:2 23.93 326 44.87 1e-12 mol:protein length:326 Coproporphyrinogen III oxidase
blastp_pdb 1tlb_D 99 176 + 78 Gaps:2 23.93 326 44.87 1e-12 mol:protein length:326 Coproporphyrinogen III oxidase
blastp_pdb 1tlb_A 99 176 + 78 Gaps:2 23.93 326 44.87 1e-12 mol:protein length:326 Coproporphyrinogen III oxidase
blastp_uniprot_sprot sp|Q93Z96|HEM62_ARATH 12 190 + 179 Gaps:17 73.82 233 60.47 1e-57 Coproporphyrinogen-III oxidase 2 chloroplastic OS Arabidopsis thaliana GN CPX2 PE 1 SV 1
blastp_uniprot_sprot sp|P35055|HEM6_SOYBN 60 190 + 131 Gaps:8 32.47 385 72.80 4e-55 Coproporphyrinogen-III oxidase chloroplastic OS Glycine max GN CPX PE 1 SV 1
blastp_uniprot_sprot sp|Q9LR75|HEM61_ARATH 52 190 + 139 Gaps:5 35.23 386 72.06 4e-54 Coproporphyrinogen-III oxidase 1 chloroplastic OS Arabidopsis thaliana GN CPX1 PE 2 SV 1
blastp_uniprot_sprot sp|Q42946|HEM6_TOBAC 11 190 + 180 Gaps:9 45.09 397 57.54 2e-48 Coproporphyrinogen-III oxidase chloroplastic OS Nicotiana tabacum GN CPX PE 2 SV 1
blastp_uniprot_sprot sp|Q7XPL2|HEM6_ORYSJ 60 190 + 131 Gaps:16 33.33 399 63.91 4e-44 Coproporphyrinogen-III oxidase chloroplastic OS Oryza sativa subsp. japonica GN CPX PE 2 SV 2
blastp_uniprot_sprot sp|Q42840|HEM6_HORVU 64 190 + 127 Gaps:14 32.48 391 58.27 7e-32 Coproporphyrinogen-III oxidase chloroplastic OS Hordeum vulgare GN CPX PE 2 SV 1
blastp_uniprot_sprot sp|Q9V3D2|HEM6_DROME 98 190 + 93 Gaps:3 24.62 390 46.88 7e-18 Coproporphyrinogen-III oxidase OS Drosophila melanogaster GN Coprox PE 1 SV 1
blastp_uniprot_sprot sp|P36551|HEM6_HUMAN 99 190 + 92 Gaps:3 20.93 454 44.21 3e-16 Coproporphyrinogen-III oxidase mitochondrial OS Homo sapiens GN CPOX PE 1 SV 3
blastp_uniprot_sprot sp|Q8DL15|HEM6_THEEB 90 167 + 78 Gaps:1 23.37 338 44.30 8e-16 Coproporphyrinogen-III oxidase aerobic OS Thermosynechococcus elongatus (strain BP-1) GN hemF PE 3 SV 2
blastp_uniprot_sprot sp|Q3B7D0|HEM6_RAT 99 190 + 92 Gaps:3 21.44 443 44.21 2e-15 Coproporphyrinogen-III oxidase mitochondrial OS Rattus norvegicus GN Cpox PE 2 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 142 163 22 PR00073 "KEGG:00860+1.3.3.3","MetaCyc:PWY-5531","MetaCyc:PWY-7159","UniPathway:UPA00251" Coprogen oxidase signature IPR001260
PRINTS 125 141 17 PR00073 "KEGG:00860+1.3.3.3","MetaCyc:PWY-5531","MetaCyc:PWY-7159","UniPathway:UPA00251" Coprogen oxidase signature IPR001260
Phobius 1 4 4 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 94 189 96 G3DSA:3.40.1500.10 "KEGG:00860+1.3.3.3","MetaCyc:PWY-5531","MetaCyc:PWY-7159","UniPathway:UPA00251" none IPR001260
Pfam 102 179 78 PF01218 "KEGG:00860+1.3.3.3","MetaCyc:PWY-5531","MetaCyc:PWY-7159","UniPathway:UPA00251" Coproporphyrinogen III oxidase IPR001260
Phobius 5 12 8 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 18 194 177 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 13 17 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 17 17 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 7 190 184 PTHR10755 "KEGG:00860+1.3.3.3","MetaCyc:PWY-5531","MetaCyc:PWY-7159","UniPathway:UPA00251";signature_desc=COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL none IPR001260
PANTHER 7 190 184 PTHR10755:SF0 none none none
SUPERFAMILY 98 189 92 SSF102886 "KEGG:00860+1.3.3.3","MetaCyc:PWY-5531","MetaCyc:PWY-7159","UniPathway:UPA00251" none IPR001260

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

0 Targeting