Protein : Qrob_P0365150.2 Q. robur
Protein Identifier  ? Qrob_P0365150.2 Organism . Name  Quercus robur
Score  96.1 Score Type  egn
Protein Description  (M=2) K11290 - template-activating factor I Gene Prediction Quality  validated
Protein length 

Sequence

Length: 250  
Kegg Orthology  K11290
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0006334 nucleosome assembly The aggregation, arrangement and bonding together of a nucleosome, the beadlike structural units of eukaryotic chromatin composed of histones and DNA.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102629772 1 233 + 233 Gaps:14 98.77 244 75.10 4e-121 NAP1-related protein 2-like
blastp_kegg lcl|vvi:100249121 1 222 + 222 Gaps:2 87.06 255 80.18 4e-121 protein SET-like
blastp_kegg lcl|vvi:100244926 1 237 + 237 Gaps:1 88.81 268 72.69 1e-118 protein SET-like
blastp_kegg lcl|pop:POPTR_0017s11710g 1 222 + 222 Gaps:3 83.91 261 78.54 7e-117 POPTRDRAFT_259013 hypothetical protein
blastp_kegg lcl|cmo:103485375 1 222 + 222 none 84.09 264 73.42 8e-115 NAP1-related protein 2
blastp_kegg lcl|csv:101230957 1 222 + 222 Gaps:5 88.93 244 77.42 1e-113 protein SET-like
blastp_kegg lcl|csv:101212820 1 222 + 222 Gaps:5 88.93 244 77.42 1e-113 protein SET-like
blastp_kegg lcl|fve:101292142 6 222 + 217 Gaps:3 87.65 251 74.55 6e-112 protein SET-like
blastp_kegg lcl|atr:s00101p00090190 2 224 + 223 Gaps:3 87.16 257 75.00 7e-112 AMTR_s00101p00090190 hypothetical protein
blastp_kegg lcl|gmx:100808081 1 222 + 222 Gaps:3 84.67 261 73.76 1e-109 protein SET-like
blastp_pdb 2e50_Q 31 220 + 190 Gaps:7 84.00 225 41.80 7e-49 mol:protein length:225 Protein SET
blastp_pdb 2e50_P 31 220 + 190 Gaps:7 84.00 225 41.80 7e-49 mol:protein length:225 Protein SET
blastp_pdb 2e50_B 31 220 + 190 Gaps:7 84.00 225 41.80 7e-49 mol:protein length:225 Protein SET
blastp_pdb 2e50_A 31 220 + 190 Gaps:7 84.00 225 41.80 7e-49 mol:protein length:225 Protein SET
blastp_pdb 3kyp_F 30 220 + 191 Gaps:7 97.41 193 31.38 6e-25 mol:protein length:193 Nucleosome assembly protein
blastp_pdb 3kyp_E 30 220 + 191 Gaps:7 97.41 193 31.38 6e-25 mol:protein length:193 Nucleosome assembly protein
blastp_pdb 3kyp_D 30 220 + 191 Gaps:7 97.41 193 31.38 6e-25 mol:protein length:193 Nucleosome assembly protein
blastp_pdb 3kyp_C 30 220 + 191 Gaps:7 97.41 193 31.38 6e-25 mol:protein length:193 Nucleosome assembly protein
blastp_pdb 3kyp_B 30 220 + 191 Gaps:7 97.41 193 31.38 6e-25 mol:protein length:193 Nucleosome assembly protein
blastp_pdb 3kyp_A 30 220 + 191 Gaps:7 97.41 193 31.38 6e-25 mol:protein length:193 Nucleosome assembly protein
blastp_uniprot_sprot sp|Q8LC68|NRP2_ARATH 1 222 + 222 Gaps:6 86.27 255 70.45 1e-102 NAP1-related protein 2 OS Arabidopsis thaliana GN NRP2 PE 1 SV 2
blastp_uniprot_sprot sp|Q69JW2|NRP2_ORYSJ 3 222 + 220 Gaps:3 87.70 252 66.06 1e-96 NAP1-related protein 2 OS Oryza sativa subsp. japonica GN Os02g0576700 PE 2 SV 1
blastp_uniprot_sprot sp|B8AEC1|NRP2_ORYSI 3 222 + 220 Gaps:3 87.70 252 66.52 1e-96 NAP1-related protein 2 OS Oryza sativa subsp. indica GN OsI_07785 PE 2 SV 1
blastp_uniprot_sprot sp|Q9CA59|NRP1_ARATH 1 224 + 224 Gaps:3 88.67 256 67.40 8e-96 NAP1-related protein 1 OS Arabidopsis thaliana GN NRP1 PE 1 SV 1
blastp_uniprot_sprot sp|Q7X7C9|NRP1_ORYSJ 4 223 + 220 Gaps:5 83.78 259 60.37 4e-87 NAP1-related protein 1 OS Oryza sativa subsp. japonica GN Os04g0459700 PE 2 SV 1
blastp_uniprot_sprot sp|A2XU85|NRP1_ORYSI 4 223 + 220 Gaps:5 83.78 259 60.37 4e-87 NAP1-related protein 1 OS Oryza sativa subsp. indica GN H0219H12.3 PE 3 SV 1
blastp_uniprot_sprot sp|P53997|SET_DROME 31 220 + 190 Gaps:12 72.12 269 41.24 8e-49 Protein SET OS Drosophila melanogaster GN Set PE 1 SV 2
blastp_uniprot_sprot sp|Q01105|SET_HUMAN 31 220 + 190 Gaps:7 65.17 290 41.80 5e-47 Protein SET OS Homo sapiens GN SET PE 1 SV 3
blastp_uniprot_sprot sp|Q9EQU5|SET_MOUSE 31 220 + 190 Gaps:7 65.40 289 41.80 7e-47 Protein SET OS Mus musculus GN Set PE 1 SV 1
blastp_uniprot_sprot sp|Q63945|SET_RAT 31 220 + 190 Gaps:7 65.40 289 41.80 7e-47 Protein SET OS Rattus norvegicus GN Set PE 2 SV 2

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 27 55 29 Coil none none none
Pfam 30 223 194 PF00956 none Nucleosome assembly protein (NAP) IPR002164
PANTHER 18 237 220 PTHR11875 none none IPR002164
SUPERFAMILY 7 221 215 SSF143113 none none none
PANTHER 18 237 220 PTHR11875:SF49 none none none

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03

0 Targeting