Protein : Qrob_P0364100.2 Q. robur
Protein Identifier  ? Qrob_P0364100.2 Organism . Name  Quercus robur
Score  95.0 Score Type  egn
Protein Description  (M=3) 2.3.1.25 - Plasmalogen synthase. Code Enzyme  EC:2.3.1.25
Gene Prediction Quality  validated Protein length 

Sequence

Length: 594  
Kegg Orthology  K13510
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0008152 metabolic process The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO:0016746 transferase activity, transferring acyl groups Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
GO:0005509 calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).

44 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103331941 1 593 + 593 Gaps:47 100.00 550 74.36 0.0 lysophospholipid acyltransferase LPEAT2
blastp_kegg lcl|vvi:100262557 5 580 + 576 Gaps:42 98.89 540 72.66 0.0 lysophosphatidylcholine acyltransferase 2-like
blastp_kegg lcl|tcc:TCM_005455 1 593 + 593 Gaps:37 100.00 568 68.49 0.0 JHL05D22.3 protein isoform 1
blastp_kegg lcl|pper:PRUPE_ppa003784mg 1 593 + 593 Gaps:48 100.00 549 73.77 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0002s15320g 1 592 + 592 Gaps:44 100.00 550 72.73 0.0 POPTRDRAFT_851914 calcineurin B subunit-related family protein
blastp_kegg lcl|pop:POPTR_0014s07030g 1 593 + 593 Gaps:48 100.00 545 72.29 0.0 POPTRDRAFT_1098087 hypothetical protein
blastp_kegg lcl|mdm:103420645 1 593 + 593 Gaps:42 100.00 555 72.07 0.0 lysophospholipid acyltransferase LPEAT2-like
blastp_kegg lcl|cit:102614787 6 593 + 588 Gaps:27 98.12 584 68.94 0.0 lysophospholipid acyltransferase LPEAT2-like
blastp_kegg lcl|fve:101303552 1 593 + 593 Gaps:66 100.00 533 73.17 0.0 1-acylglycerophosphocholine O-acyltransferase 1-like
blastp_kegg lcl|cic:CICLE_v10019439mg 6 593 + 588 Gaps:49 98.03 558 70.20 0.0 hypothetical protein
blastp_pdb 1y6w_A 424 558 + 135 Gaps:4 93.92 148 25.18 1e-07 mol:protein length:148 Calmodulin
blastp_pdb 2l1w_A 425 558 + 134 Gaps:4 92.62 149 26.81 2e-07 mol:protein length:149 Calmodulin
blastp_pdb 1ggz_A 424 562 + 139 Gaps:4 96.62 148 24.48 3e-07 mol:protein length:148 CALMODULIN-RELATED PROTEIN NB-1
blastp_pdb 2aao_B 405 567 + 163 Gaps:19 98.80 166 28.66 2e-06 mol:protein length:166 Calcium-dependent protein kinase isoform AK1
blastp_pdb 2aao_A 405 567 + 163 Gaps:19 98.80 166 28.66 2e-06 mol:protein length:166 Calcium-dependent protein kinase isoform AK1
blastp_pdb 3evr_A 399 558 + 160 Gaps:6 39.42 411 23.46 3e-06 mol:protein length:411 Myosin light chain kinase Green fluorescent
blastp_pdb 3ek7_A 399 558 + 160 Gaps:6 35.92 451 23.46 3e-06 mol:protein length:451 Myosin light chain kinase Green fluorescent
blastp_pdb 3ek4_A 399 558 + 160 Gaps:6 35.92 451 23.46 3e-06 mol:protein length:451 Myosin light chain kinase Green fluorescent
blastp_pdb 3ek8_A 399 558 + 160 Gaps:6 35.92 451 23.46 4e-06 mol:protein length:451 Myosin light chain kinase Green fluorescent
blastp_pdb 3evv_A 399 558 + 160 Gaps:6 36.08 449 23.46 4e-06 mol:protein length:449 Myosin light chain kinase Green fluorescent
blastp_uniprot_sprot sp|Q8S8S2|LPCT2_ARATH 1 576 + 576 Gaps:46 99.44 539 65.86 0.0 Lysophospholipid acyltransferase LPEAT2 OS Arabidopsis thaliana GN LPEAT2 PE 1 SV 1
blastp_uniprot_sprot sp|Q0KHU5|PCAT1_DROME 79 565 + 487 Gaps:65 86.68 533 32.03 1e-48 1-acylglycerophosphocholine O-acyltransferase 1 OS Drosophila melanogaster GN CG32699 PE 2 SV 1
blastp_uniprot_sprot sp|Q1LWG4|PCAT1_DANRE 84 572 + 489 Gaps:39 88.59 517 29.04 3e-46 Lysophosphatidylcholine acyltransferase 1 OS Danio rerio GN lpcat1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8BYI6|PCAT2_MOUSE 96 572 + 477 Gaps:56 81.80 544 31.01 3e-46 Lysophosphatidylcholine acyltransferase 2 OS Mus musculus GN Lpcat2 PE 1 SV 1
blastp_uniprot_sprot sp|Q1HAQ0|PCAT1_RAT 84 558 + 475 Gaps:40 83.71 534 28.64 1e-45 Lysophosphatidylcholine acyltransferase 1 OS Rattus norvegicus GN Lpcat1 PE 2 SV 2
blastp_uniprot_sprot sp|Q3TFD2|PCAT1_MOUSE 84 558 + 475 Gaps:40 83.71 534 28.41 6e-45 Lysophosphatidylcholine acyltransferase 1 OS Mus musculus GN Lpcat1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8NF37|PCAT1_HUMAN 84 558 + 475 Gaps:40 83.71 534 28.19 1e-44 Lysophosphatidylcholine acyltransferase 1 OS Homo sapiens GN LPCAT1 PE 1 SV 2
blastp_uniprot_sprot sp|Q7L5N7|PCAT2_HUMAN 140 572 + 433 Gaps:44 74.08 544 29.53 4e-44 Lysophosphatidylcholine acyltransferase 2 OS Homo sapiens GN LPCAT2 PE 1 SV 1
blastp_uniprot_sprot sp|Q4V8A1|PCT2B_RAT 140 572 + 433 Gaps:56 78.34 517 31.60 3e-42 Lysophosphatidylcholine acyltransferase 2B OS Rattus norvegicus GN Lpcat2b PE 2 SV 1
blastp_uniprot_sprot sp|P0C1Q3|PCAT2_RAT 135 572 + 438 Gaps:44 75.00 544 29.90 1e-41 Lysophosphatidylcholine acyltransferase 2 OS Rattus norvegicus GN Lpcat2 PE 3 SV 1

24 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 79 300 222 PTHR23063:SF9 none none none
SUPERFAMILY 143 293 151 SSF69593 none none none
Pfam 532 564 33 PF13833 none EF-hand domain pair none
PANTHER 332 574 243 PTHR23063:SF9 none none none
Phobius 322 340 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
SMART 181 291 111 SM00563 none Phosphate acyltransferases IPR002123
Phobius 299 316 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 546 558 13 PS00018 none EF-hand calcium-binding domain. IPR018247
Phobius 1 98 98 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 414 576 163 SSF47473 none none none
ProSiteProfiles 533 568 36 PS50222 none EF-hand calcium-binding domain profile. IPR002048
Phobius 99 127 29 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 332 574 243 PTHR23063 none none none
Pfam 176 286 111 PF01553 none Acyltransferase IPR002123
SMART 537 565 29 SM00054 none EF-hand, calcium binding motif IPR002048
SMART 464 492 29 SM00054 none EF-hand, calcium binding motif IPR002048
Phobius 169 298 130 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSiteProfiles 466 495 30 PS50222 none EF-hand calcium-binding domain profile. IPR002048
Phobius 147 168 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 341 593 253 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 79 300 222 PTHR23063 none none none
Gene3D 418 571 154 G3DSA:1.10.238.10 none none IPR011992
Phobius 317 321 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 128 146 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

3 Localization

Analysis Start End Length
TMHMM 149 168 19
TMHMM 304 326 22
TMHMM 112 134 22

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting