Protein : Qrob_P0363440.2 Q. robur
Protein Identifier  ? Qrob_P0363440.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR30508:SF1 - FES CLUSTER ASSEMBLY PROTEIN SUFB Gene Prediction Quality  validated
Protein length 

Sequence

Length: 565  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

1 GO Terms

Identifier Name Description
GO:0016226 iron-sulfur cluster assembly The incorporation of iron and exogenous sulfur into a metallo-sulfur cluster.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102614882 1 564 + 564 Gaps:8 100.00 556 88.31 0.0 UPF0051 protein ABCI8 chloroplastic-like
blastp_kegg lcl|cmo:103485355 1 564 + 564 Gaps:10 100.00 554 87.91 0.0 UPF0051 protein ABCI8 chloroplastic
blastp_kegg lcl|csv:101226285 1 564 + 564 Gaps:10 100.00 554 87.91 0.0 UPF0051 protein ABCI8 chloroplastic-like
blastp_kegg lcl|csv:101213535 1 564 + 564 Gaps:10 100.00 554 87.91 0.0 UPF0051 protein ABCI8 chloroplastic-like
blastp_kegg lcl|tcc:TCM_030209 1 564 + 564 Gaps:12 95.67 577 87.86 0.0 ATP binding cassette protein 1
blastp_kegg lcl|pop:POPTR_0004s01660g 1 564 + 564 Gaps:14 100.00 554 86.64 0.0 POPTRDRAFT_758422 ATP-binding-cassette transporter family protein
blastp_kegg lcl|cic:CICLE_v10014785mg 1 564 + 564 Gaps:8 100.00 556 87.77 0.0 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0905060 1 564 + 564 Gaps:11 100.00 553 86.98 0.0 Protein sufB putative
blastp_kegg lcl|tcc:TCM_028701 1 564 + 564 Gaps:12 100.00 552 86.41 0.0 ATP binding cassette protein 1 isoform 1
blastp_kegg lcl|mdm:103434513 1 564 + 564 Gaps:16 100.00 548 86.50 0.0 UPF0051 protein ABCI8 chloroplastic
blastp_pdb 4dn7_B 162 556 + 395 Gaps:38 87.88 429 25.20 5e-29 mol:protein length:429 ABC transporter ATP-binding protein
blastp_pdb 4dn7_A 162 556 + 395 Gaps:38 87.88 429 25.20 5e-29 mol:protein length:429 ABC transporter ATP-binding protein
blastp_pdb 1vh4_B 367 546 + 180 Gaps:1 41.15 435 25.14 4e-11 mol:protein length:435 SufD protein
blastp_pdb 1vh4_A 367 546 + 180 Gaps:1 41.15 435 25.14 4e-11 mol:protein length:435 SufD protein
blastp_pdb 2zu0_B 367 546 + 180 Gaps:1 42.32 423 25.14 4e-11 mol:protein length:423 Protein sufD
blastp_pdb 2zu0_A 367 546 + 180 Gaps:1 42.32 423 25.14 4e-11 mol:protein length:423 Protein sufD
blastp_uniprot_sprot sp|Q9ZS97|AB8I_ARATH 1 564 + 564 Gaps:11 100.00 557 81.51 0.0 UPF0051 protein ABCI8 chloroplastic OS Arabidopsis thaliana GN ABCI8 PE 2 SV 1
blastp_uniprot_sprot sp|P51240|YCF24_PORPU 100 564 + 465 none 95.48 487 69.03 0.0 UPF0051 protein ycf24 OS Porphyra purpurea GN ycf24 PE 3 SV 1
blastp_uniprot_sprot sp|P48260|YCF24_CYAPA 100 564 + 465 Gaps:1 95.88 486 68.88 0.0 UPF0051 protein ycf24 OS Cyanophora paradoxa GN ycf24 PE 3 SV 1
blastp_uniprot_sprot sp|Q55790|Y074_SYNY3 100 564 + 465 Gaps:1 97.08 480 69.53 0.0 UPF0051 protein slr0074 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN slr0074 PE 3 SV 1
blastp_uniprot_sprot sp|Q1XDP7|YCF24_PYRYE 100 564 + 465 none 95.48 487 67.53 0.0 UPF0051 protein ycf24 OS Pyropia yezoensis GN ycf24 PE 3 SV 1
blastp_uniprot_sprot sp|P49530|YCF24_ODOSI 100 564 + 465 none 95.68 486 68.17 0.0 UPF0051 protein ycf24 OS Odontella sinensis GN ycf24 PE 3 SV 1
blastp_uniprot_sprot sp|Q3E8H7|AB9I_ARATH 1 564 + 564 Gaps:110 100.00 470 73.62 0.0 Putative UPF0051 protein ABCI9 OS Arabidopsis thaliana GN ABCI9 PE 3 SV 1
blastp_uniprot_sprot sp|O78473|YCF24_GUITH 100 564 + 465 none 96.27 483 64.95 0.0 UPF0051 protein ycf24 OS Guillardia theta GN ycf24 PE 3 SV 1
blastp_uniprot_sprot sp|Q9TLX2|YCF24_CYACA 85 564 + 480 Gaps:3 98.76 483 58.49 0.0 UPF0051 protein ycf24 OS Cyanidium caldarium GN ycf24 PE 3 SV 1
blastp_uniprot_sprot sp|P77522|SUFB_ECOLI 100 564 + 465 Gaps:17 95.76 495 56.96 0.0 FeS cluster assembly protein SufB OS Escherichia coli (strain K12) GN sufB PE 1 SV 2
rpsblast_cdd gnl|CDD|183322 84 564 + 481 Gaps:3 99.59 486 65.50 0.0 PRK11814 PRK11814 cysteine desulfurase activator complex subunit SufB Provisional.
rpsblast_cdd gnl|CDD|177024 80 564 + 485 Gaps:3 99.38 485 69.92 0.0 CHL00085 ycf24 putative ABC transporter.
rpsblast_cdd gnl|CDD|131035 98 555 + 458 Gaps:13 99.78 448 48.99 1e-175 TIGR01980 sufB FeS assembly protein SufB. This protein SufB forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system together with SufA is believed to act in iron-sulfur cluster formation during oxidative stress. Note that SufC belongs to the family of ABC transporter ATP binding proteins so this protein encoded by an adjacent gene has often been annotated as a transporter component.
rpsblast_cdd gnl|CDD|31063 120 562 + 443 Gaps:39 100.00 412 42.72 1e-113 COG0719 SufB ABC-type transport system involved in Fe-S cluster assembly permease component [Posttranslational modification protein turnover chaperones].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 81 564 484 PTHR30508 none none none
TIGRFAM 99 555 457 TIGR01980 none sufB: FeS assembly protein SufB IPR010231
Pfam 301 535 235 PF01458 none Uncharacterized protein family (UPF0051) IPR000825
SUPERFAMILY 119 561 443 SSF101960 none none none
PANTHER 81 564 484 PTHR30508:SF1 none none none

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7

0 Targeting