Protein : Qrob_P0362990.2 Q. robur
Protein Identifier  ? Qrob_P0362990.2 Organism . Name  Quercus robur
Protein Description  (M=20) PF01357//PF03330 - Pollen allergen // Rare lipoprotein A (RlpA)-like double-psi beta-barrel Alias (in v1)  Qrob_P0101870.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 249  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005576 extracellular region The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
GO:0009664 plant-type cell wall organization A process that results in the assembly and arrangement of constituent parts of the cellulose and pectin-containing cell wall, or in the disassembly of the cellulose and pectin-containing cell wall. This process is carried out at the cellular level. An example of this process is found in Arabidopsis thaliana.

29 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0342250 1 248 + 248 Gaps:1 100.00 247 84.62 1e-153 Alpha-expansin 1 precursor putative
blastp_kegg lcl|vvi:100267326 1 248 + 248 Gaps:1 44.34 557 85.43 5e-151 uncharacterized LOC100267326
blastp_kegg lcl|cic:CICLE_v10021887mg 1 248 + 248 Gaps:1 100.00 247 83.00 6e-150 hypothetical protein
blastp_kegg lcl|cit:102608333 1 248 + 248 Gaps:1 100.00 247 83.00 6e-150 expansin-A15-like
blastp_kegg lcl|pop:POPTR_0001s03830g 1 248 + 248 Gaps:1 100.00 247 84.21 6e-149 POPTRDRAFT_547568 expansin S1 precursor family protein
blastp_kegg lcl|cic:CICLE_v10017738mg 1 248 + 248 Gaps:1 100.00 247 82.59 3e-147 hypothetical protein
blastp_kegg lcl|cit:102629339 1 248 + 248 Gaps:1 100.00 247 82.59 3e-147 expansin-A10-like
blastp_kegg lcl|tcc:TCM_026020 1 248 + 248 Gaps:1 78.16 316 81.78 1e-146 Alpha-expansin 1 precursor
blastp_kegg lcl|pda:103712558 1 248 + 248 Gaps:1 100.00 247 80.97 9e-145 expansin-A15-like
blastp_kegg lcl|rcu:RCOM_1122060 1 248 + 248 Gaps:1 100.00 247 78.54 2e-142 Alpha-expansin 15 precursor putative
blastp_pdb 2hcz_X 26 243 + 218 Gaps:34 89.80 245 30.91 7e-22 mol:protein length:245 Beta-expansin 1a
blastp_pdb 1n10_B 23 243 + 221 Gaps:30 92.53 241 31.39 3e-21 mol:protein length:241 Pollen allergen Phl p 1
blastp_pdb 1n10_A 23 243 + 221 Gaps:30 92.53 241 31.39 3e-21 mol:protein length:241 Pollen allergen Phl p 1
blastp_uniprot_sprot sp|Q9FMA0|EXP14_ARATH 1 248 + 248 Gaps:3 98.43 255 76.10 3e-141 Expansin-A14 OS Arabidopsis thaliana GN EXPA14 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C554|EXPA1_ARATH 1 248 + 248 Gaps:1 99.60 250 76.31 2e-137 Expansin-A1 OS Arabidopsis thaliana GN EXPA1 PE 2 SV 1
blastp_uniprot_sprot sp|O80622|EXP15_ARATH 15 248 + 234 none 92.49 253 78.63 1e-134 Expansin-A15 OS Arabidopsis thaliana GN EXPA15 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LDR9|EXP10_ARATH 1 248 + 248 none 99.60 249 76.61 2e-133 Expansin-A10 OS Arabidopsis thaliana GN EXPA10 PE 2 SV 1
blastp_uniprot_sprot sp|O22874|EXPA8_ARATH 3 248 + 246 Gaps:2 98.02 253 73.39 3e-131 Expansin-A8 OS Arabidopsis thaliana GN EXPA8 PE 2 SV 1
blastp_uniprot_sprot sp|Q0DHB7|EXPA4_ORYSJ 9 248 + 240 Gaps:1 97.97 246 70.95 2e-125 Expansin-A4 OS Oryza sativa subsp. japonica GN EXPA4 PE 2 SV 1
blastp_uniprot_sprot sp|A2Y5R6|EXPA4_ORYSI 9 248 + 240 Gaps:1 97.97 246 70.95 2e-125 Expansin-A4 OS Oryza sativa subsp. indica GN EXPA4 PE 2 SV 1
blastp_uniprot_sprot sp|Q38866|EXPA2_ARATH 1 248 + 248 Gaps:7 100.00 255 67.45 8e-125 Expansin-A2 OS Arabidopsis thaliana GN EXPA2 PE 2 SV 2
blastp_uniprot_sprot sp|Q9M2S9|EXP16_ARATH 3 248 + 246 Gaps:7 97.31 260 67.59 4e-124 Expansin-A16 OS Arabidopsis thaliana GN EXPA16 PE 2 SV 1
blastp_uniprot_sprot sp|Q40636|EXPA2_ORYSJ 8 248 + 241 none 96.02 251 68.46 3e-123 Expansin-A2 OS Oryza sativa subsp. japonica GN EXPA2 PE 2 SV 2
rpsblast_cdd gnl|CDD|165628 1 248 + 248 Gaps:1 100.00 247 85.43 1e-118 PLN00050 PLN00050 expansin A Provisional.
rpsblast_cdd gnl|CDD|177787 24 247 + 224 Gaps:3 88.67 256 67.40 1e-95 PLN00193 PLN00193 expansin-A Provisional.
rpsblast_cdd gnl|CDD|129070 61 146 + 86 Gaps:1 100.00 87 74.71 5e-41 smart00837 DPBB_1 Rare lipoprotein A (RlpA)-like double-psi beta-barrel. Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen.
rpsblast_cdd gnl|CDD|201746 157 234 + 78 Gaps:4 100.00 82 57.32 1e-29 pfam01357 Pollen_allerg_1 Pollen allergen. This family contains allergens lol PI PII and PIII from Lolium perenne.
rpsblast_cdd gnl|CDD|202595 61 146 + 86 Gaps:17 100.00 77 45.45 2e-21 pfam03330 DPBB_1 Rare lipoprotein A (RlpA)-like double-psi beta-barrel. Rare lipoprotein A (RlpA) contains a conserved region that has the double-psi beta-barrel (DPBB) fold. The function of RlpA is not well understood but it has been shown to act as a prc mutant suppressor in Escherichia coli. The DPBB fold is often an enzymatic domain. The members of this family are quite diverse and if catalytic this family may contain several different functions. Another example of this domain is found in the N terminus of pollen allergen.
rpsblast_cdd gnl|CDD|178594 4 243 + 240 Gaps:16 96.36 247 29.83 3e-17 PLN03023 PLN03023 Expansin-like B1 Provisional.

31 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 157 234 78 PF01357 none Pollen allergen IPR007117
PRINTS 95 105 11 PR01226 none Expansin signature IPR002963
PRINTS 83 94 12 PR01226 none Expansin signature IPR002963
PRINTS 155 167 13 PR01226 none Expansin signature IPR002963
PRINTS 167 188 22 PR01226 none Expansin signature IPR002963
PRINTS 131 144 14 PR01226 none Expansin signature IPR002963
PRINTS 56 70 15 PR01226 none Expansin signature IPR002963
PRINTS 114 131 18 PR01226 none Expansin signature IPR002963
PRINTS 202 223 22 PR01226 none Expansin signature IPR002963
PRINTS 231 247 17 PR01226 none Expansin signature IPR002963
Gene3D 151 246 96 G3DSA:2.60.40.760 none none IPR007117
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none
ProSiteProfiles 44 156 113 PS50842 none Expansin, family-45 endoglucanase-like domain profile. IPR007112
Gene3D 11 150 140 G3DSA:2.40.40.10 none none IPR014733
PANTHER 8 248 241 PTHR31867:SF6 none none none
Phobius 17 21 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 8 248 241 PTHR31867 none none none
PRINTS 43 61 19 PR01225 none Expansin/Lol pI family signature IPR007118
PRINTS 139 155 17 PR01225 none Expansin/Lol pI family signature IPR007118
PRINTS 231 245 15 PR01225 none Expansin/Lol pI family signature IPR007118
PRINTS 25 40 16 PR01225 none Expansin/Lol pI family signature IPR007118
PRINTS 193 207 15 PR01225 none Expansin/Lol pI family signature IPR007118
PRINTS 65 83 19 PR01225 none Expansin/Lol pI family signature IPR007118
SUPERFAMILY 9 174 166 SSF50685 none none IPR009009
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 22 248 227 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 153 244 92 SSF49590 none none IPR007117
SMART 61 146 86 SM00837 none Rare lipoprotein A (RlpA)-like double-psi beta-barrel IPR007112
ProSiteProfiles 166 245 80 PS50843 none Expansin, Cellulose-binding-like domain profile. IPR007117
Pfam 61 146 86 PF03330 none Rare lipoprotein A (RlpA)-like double-psi beta-barrel IPR009009

1 Localization

Analysis Start End Length
SignalP_EUK 1 21 20

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting