Protein : Qrob_P0359380.2 Q. robur
Protein Identifier  ? Qrob_P0359380.2 Organism . Name  Quercus robur
Score  34.3 Score Type  egn
Protein Description  (M=5) K01126 - glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Code Enzyme  EC:3.1.4.46
Gene Prediction Quality  validated Protein length 

Sequence

Length: 394  
Kegg Orthology  K01126
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0006629 lipid metabolic process The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
GO:0008081 phosphoric diester hydrolase activity Catalysis of the hydrolysis of a phosphodiester to give a phosphomonoester and a free hydroxyl group.
GO:0006071 glycerol metabolic process The chemical reactions and pathways involving glycerol, 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids.
GO:0008889 glycerophosphodiester phosphodiesterase activity Catalysis of the reaction: a glycerophosphodiester + H2O = an alcohol + sn-glycerol 3-phosphate.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103338572 1 393 + 393 Gaps:1 100.00 392 80.87 0.0 probable glycerophosphoryl diester phosphodiesterase 3
blastp_kegg lcl|pper:PRUPE_ppa006823mg 1 393 + 393 Gaps:3 100.00 394 80.96 0.0 hypothetical protein
blastp_kegg lcl|fve:101311863 1 393 + 393 Gaps:1 100.00 392 80.36 0.0 glycerophosphoryl diester phosphodiesterase-like
blastp_kegg lcl|pxb:103930605 1 393 + 393 Gaps:2 100.00 393 79.64 0.0 probable glycerophosphoryl diester phosphodiesterase 2
blastp_kegg lcl|pxb:103937763 1 393 + 393 Gaps:5 100.00 390 80.77 0.0 probable glycerophosphoryl diester phosphodiesterase 3
blastp_kegg lcl|gmx:100778145 1 391 + 391 Gaps:1 100.00 392 78.83 0.0 PHYTASE glycerophosphoryl diester phosphodiesterase-like
blastp_kegg lcl|tcc:TCM_014275 4 391 + 388 Gaps:3 97.02 403 78.52 0.0 PLC-like phosphodiesterases superfamily protein isoform 1
blastp_kegg lcl|mdm:103437892 1 393 + 393 Gaps:9 100.00 384 81.77 0.0 probable glycerophosphoryl diester phosphodiesterase 3
blastp_kegg lcl|vvi:100260480 7 392 + 386 Gaps:3 98.48 395 79.18 0.0 glycerophosphoryl diester phosphodiesterase-like
blastp_kegg lcl|mdm:103415331 7 393 + 387 Gaps:2 93.93 412 79.33 0.0 probable glycerophosphoryl diester phosphodiesterase 3
blastp_pdb 1ydy_B 47 354 + 308 Gaps:56 88.20 356 34.39 4e-31 mol:protein length:356 Glycerophosphoryl diester phosphodiesterase
blastp_pdb 1ydy_A 47 354 + 308 Gaps:56 88.20 356 34.39 4e-31 mol:protein length:356 Glycerophosphoryl diester phosphodiesterase
blastp_pdb 1t8q_D 47 354 + 308 Gaps:56 93.45 336 34.39 5e-31 mol:protein length:336 Glycerophosphoryl diester phosphodiesterase
blastp_pdb 1t8q_C 47 354 + 308 Gaps:56 93.45 336 34.39 5e-31 mol:protein length:336 Glycerophosphoryl diester phosphodiesterase
blastp_pdb 1t8q_B 47 354 + 308 Gaps:56 93.45 336 34.39 5e-31 mol:protein length:336 Glycerophosphoryl diester phosphodiesterase
blastp_pdb 1t8q_A 47 354 + 308 Gaps:56 93.45 336 34.39 5e-31 mol:protein length:336 Glycerophosphoryl diester phosphodiesterase
blastp_pdb 2pz0_B 47 211 + 165 Gaps:35 51.59 252 40.77 3e-12 mol:protein length:252 Glycerophosphoryl diester phosphodiesterase
blastp_pdb 2pz0_A 47 211 + 165 Gaps:35 51.59 252 40.77 3e-12 mol:protein length:252 Glycerophosphoryl diester phosphodiesterase
blastp_pdb 2p76_H 39 355 + 317 Gaps:90 88.15 287 34.78 6e-12 mol:protein length:287 Glycerophosphoryl diester phosphodiesterase
blastp_pdb 2p76_G 39 355 + 317 Gaps:90 88.15 287 34.78 6e-12 mol:protein length:287 Glycerophosphoryl diester phosphodiesterase
blastp_uniprot_sprot sp|P09394|GLPQ_ECOLI 47 354 + 308 Gaps:56 87.71 358 34.39 1e-30 Glycerophosphoryl diester phosphodiesterase OS Escherichia coli (strain K12) GN glpQ PE 1 SV 2
blastp_uniprot_sprot sp|Q06282|GLPQ_HAEIN 1 354 + 354 Gaps:72 96.70 364 32.67 1e-26 Glycerophosphoryl diester phosphodiesterase OS Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN glpQ PE 1 SV 1
blastp_uniprot_sprot sp|Q7Y208|GLPQ3_ARATH 39 354 + 316 Gaps:60 77.33 763 28.14 8e-20 Probable glycerophosphoryl diester phosphodiesterase 3 OS Arabidopsis thaliana GN GPDL3 PE 1 SV 2
blastp_uniprot_sprot sp|P37965|GLPQ_BACSU 10 354 + 345 Gaps:87 94.20 293 34.42 8e-18 Glycerophosphoryl diester phosphodiesterase OS Bacillus subtilis (strain 168) GN glpQ PE 3 SV 1
blastp_uniprot_sprot sp|Q9FJ62|GLPQ1_ARATH 32 373 + 342 Gaps:69 83.55 766 25.16 8e-18 Probable glycerophosphoryl diester phosphodiesterase 1 OS Arabidopsis thaliana GN GPDL1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SZ11|GLPQ2_ARATH 27 363 + 337 Gaps:69 81.16 759 25.97 3e-17 Probable glycerophosphoryl diester phosphodiesterase 2 OS Arabidopsis thaliana GN GPDL2 PE 1 SV 3
blastp_uniprot_sprot sp|O30405|GLPQ_TREPA 47 354 + 308 Gaps:61 88.48 356 27.62 3e-15 Glycerophosphoryl diester phosphodiesterase OS Treponema pallidum (strain Nichols) GN glpQ PE 3 SV 1
blastp_uniprot_sprot sp|P96236|GLPQ1_MYCTU 44 248 + 205 Gaps:34 63.87 274 29.71 1e-13 Probable glycerophosphoryl diester phosphodiesterase 1 OS Mycobacterium tuberculosis GN glpQ1 PE 2 SV 3
blastp_uniprot_sprot sp|Q9JL55|GDE1_RAT 24 100 + 77 Gaps:2 22.66 331 44.00 3e-08 Glycerophosphodiester phosphodiesterase 1 OS Rattus norvegicus GN Gde1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9JL56|GDE1_MOUSE 24 100 + 77 Gaps:2 22.66 331 44.00 3e-08 Glycerophosphodiester phosphodiesterase 1 OS Mus musculus GN Gde1 PE 2 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 6 17 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 18 21 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
SUPERFAMILY 43 361 319 SSF51695 none none IPR017946
Pfam 49 356 308 PF03009 none Glycerophosphoryl diester phosphodiesterase family IPR030395
PANTHER 26 103 78 PTHR23344 none none IPR004129
ProSiteProfiles 44 362 319 PS51704 none GP-PDE domain profile. IPR030395
Phobius 22 393 372 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 123 387 265 PTHR23344:SF7 none none none
PANTHER 26 103 78 PTHR23344:SF7 none none none
PANTHER 123 387 265 PTHR23344 none none IPR004129
Gene3D 43 359 317 G3DSA:3.20.20.190 none none IPR017946
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none

1 Localization

Analysis Start End Length
SignalP_EUK 1 21 20

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting