Protein : Qrob_P0358820.2 Q. robur
Protein Identifier  ? Qrob_P0358820.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K02110 - F-type H+-transporting ATPase subunit c [EC:3.6.3.14] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 82  
Kegg Orthology  K02110
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

5 GO Terms

Identifier Name Description
GO:0015991 ATP hydrolysis coupled proton transport The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis.
GO:0015078 hydrogen ion transmembrane transporter activity Enables the transfer of hydrogen ions from one side of a membrane to the other.
GO:0015986 ATP synthesis coupled proton transport The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain A protein complex that forms part of a proton-transporting two-sector ATPase complex and carries out proton transport across a membrane. The proton-transporting domain (F0, V0, or A0) includes integral and peripheral membrane proteins.
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|atr:AmtrCp009 1 81 + 81 none 100.00 81 100.00 4e-46 atpH ATPase III subunit
blastp_kegg lcl|pda:8890600 1 81 + 81 none 100.00 81 100.00 4e-46 atpH PhdaC_p008 ATP synthase CF0 C chain subunit III
blastp_kegg lcl|sly:3950479 1 81 + 81 none 100.00 81 100.00 4e-46 atpH LyesC2p082 ATP synthase CF0 subunit III
blastp_kegg lcl|vvi:4025116 1 81 + 81 none 100.00 81 100.00 4e-46 atpH ViviCp008 ATPase III subunit
blastp_kegg lcl|pop:Poptr_cp007 1 81 + 81 none 100.00 81 100.00 4e-46 atpH ATP synthase CF0 C subunit (EC:3.6.3.14)
blastp_kegg lcl|rcu:RCOM_ORF00016 1 81 + 81 none 100.00 81 100.00 4e-46 atpH ATP synthase CF0 C subunit
blastp_kegg lcl|pmum:18668004 1 81 + 81 none 100.00 81 100.00 4e-46 atpH CP95_p080 ATP synthase CF0 subunit III
blastp_kegg lcl|pper:PrpeC_p008 1 81 + 81 none 100.00 81 100.00 4e-46 atpH ATP synthase CF0 subunit III
blastp_kegg lcl|fve:10251492 1 81 + 81 none 100.00 81 100.00 4e-46 atpH FvH4_C0014 ATP synthase CF0 subunit III
blastp_kegg lcl|fve:101310182 1 81 + 81 none 100.00 81 100.00 4e-46 ATP synthase subunit c chloroplastic-like
blastp_pdb 2w5j_V 2 79 + 78 none 100.00 78 98.72 5e-45 mol:protein length:78 ATP SYNTHASE C CHAIN CHLOROPLASTIC
blastp_pdb 2w5j_M 2 79 + 78 none 100.00 78 98.72 5e-45 mol:protein length:78 ATP SYNTHASE C CHAIN CHLOROPLASTIC
blastp_pdb 2w5j_L 2 79 + 78 none 100.00 78 98.72 5e-45 mol:protein length:78 ATP SYNTHASE C CHAIN CHLOROPLASTIC
blastp_pdb 2w5j_K 2 79 + 78 none 100.00 78 98.72 5e-45 mol:protein length:78 ATP SYNTHASE C CHAIN CHLOROPLASTIC
blastp_pdb 2w5j_J 2 79 + 78 none 100.00 78 98.72 5e-45 mol:protein length:78 ATP SYNTHASE C CHAIN CHLOROPLASTIC
blastp_pdb 2w5j_I 2 79 + 78 none 100.00 78 98.72 5e-45 mol:protein length:78 ATP SYNTHASE C CHAIN CHLOROPLASTIC
blastp_pdb 2w5j_H 2 79 + 78 none 100.00 78 98.72 5e-45 mol:protein length:78 ATP SYNTHASE C CHAIN CHLOROPLASTIC
blastp_pdb 2w5j_G 2 79 + 78 none 100.00 78 98.72 5e-45 mol:protein length:78 ATP SYNTHASE C CHAIN CHLOROPLASTIC
blastp_pdb 2w5j_F 2 79 + 78 none 100.00 78 98.72 5e-45 mol:protein length:78 ATP SYNTHASE C CHAIN CHLOROPLASTIC
blastp_pdb 2w5j_E 2 79 + 78 none 100.00 78 98.72 5e-45 mol:protein length:78 ATP SYNTHASE C CHAIN CHLOROPLASTIC
blastp_uniprot_sprot sp|Q0ZJ33|ATPH_VITVI 1 81 + 81 none 100.00 81 100.00 2e-47 ATP synthase subunit c chloroplastic OS Vitis vinifera GN atpH PE 3 SV 1
blastp_uniprot_sprot sp|P06286|ATPH_TOBAC 1 81 + 81 none 100.00 81 100.00 2e-47 ATP synthase subunit c chloroplastic OS Nicotiana tabacum GN atpH PE 3 SV 1
blastp_uniprot_sprot sp|Q2MIB3|ATPH_SOLLC 1 81 + 81 none 100.00 81 100.00 2e-47 ATP synthase subunit c chloroplastic OS Solanum lycopersicum GN atpH PE 3 SV 1
blastp_uniprot_sprot sp|Q4FGE9|ATPH_RANMC 1 81 + 81 none 100.00 81 100.00 2e-47 ATP synthase subunit c chloroplastic OS Ranunculus macranthus GN atpH PE 3 SV 1
blastp_uniprot_sprot sp|Q7HJJ2|ATPH_PSINU 1 81 + 81 none 100.00 81 100.00 2e-47 ATP synthase subunit c chloroplastic OS Psilotum nudum GN atpH PE 3 SV 1
blastp_uniprot_sprot sp|A4GYP5|ATPH_POPTR 1 81 + 81 none 100.00 81 100.00 2e-47 ATP synthase subunit c chloroplastic OS Populus trichocarpa GN atpH PE 3 SV 1
blastp_uniprot_sprot sp|Q14FH0|ATPH_POPAL 1 81 + 81 none 100.00 81 100.00 2e-47 ATP synthase subunit c chloroplastic OS Populus alba GN atpH PE 3 SV 1
blastp_uniprot_sprot sp|Q09G59|ATPH_PLAOC 1 81 + 81 none 100.00 81 100.00 2e-47 ATP synthase subunit c chloroplastic OS Platanus occidentalis GN atpH PE 3 SV 1
blastp_uniprot_sprot sp|Q3BAQ5|ATPH_PHAAO 1 81 + 81 none 100.00 81 100.00 2e-47 ATP synthase subunit c chloroplastic OS Phalaenopsis aphrodite subsp. formosana GN atpH PE 3 SV 1
blastp_uniprot_sprot sp|Q68S19|ATPH_PANGI 1 81 + 81 none 100.00 81 100.00 2e-47 ATP synthase subunit c chloroplastic OS Panax ginseng GN atpH PE 3 SV 1

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 4 80 77 PTHR10031 none none none
PRINTS 33 48 16 PR00124 none ATP synthase C subunit signature IPR000454
PRINTS 12 31 20 PR00124 none ATP synthase C subunit signature IPR000454
PRINTS 50 75 26 PR00124 none ATP synthase C subunit signature IPR000454
Phobius 16 33 18 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Hamap 9 77 69 MF_01396 none ATP synthase subunit c [atpH]. none
Gene3D 3 78 76 G3DSA:1.20.20.10 none none IPR000454
TIGRFAM 20 77 58 TIGR01260 none ATP_synt_c: ATP synthase F0, C subunit IPR005953
Phobius 57 77 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 4 80 77 PTHR10031:SF6 none none none
Pfam 9 77 69 PF00137 none ATP synthase subunit C IPR002379
Phobius 4 15 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
SUPERFAMILY 3 79 77 SSF81333 none none IPR002379
Phobius 1 33 33 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 34 56 23 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSitePatterns 40 61 22 PS00605 none ATP synthase c subunit signature. IPR020537
Phobius 78 81 4 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none

2 Localization

Analysis Start End Length
TMHMM 10 32 22
TMHMM 53 75 22

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8

0 Targeting